BLASTX nr result

ID: Coptis24_contig00011748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011748
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41140.1| unknown [Medicago truncatula]                          119   3e-25
ref|XP_002275464.1| PREDICTED: uncharacterized protein LOC100252...   117   1e-24
ref|XP_002275421.1| PREDICTED: uncharacterized protein LOC100257...   117   1e-24
ref|XP_002275321.1| PREDICTED: uncharacterized protein LOC100263...   117   1e-24
ref|XP_002525775.1| conserved hypothetical protein [Ricinus comm...   114   1e-23

>gb|AFK41140.1| unknown [Medicago truncatula]
          Length = 91

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/91 (64%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
 Frame = -3

Query: 342 MSSTSRAWVAALCVGAIEALKDQGLYRWNYAFRSLQDTAKNNIRSFSQAKRLSPTCSS-M 166
           MSSTSRAWVAA  V  +EALKDQG+ RWN+  +S+Q+  KNN+RSFSQAK+LS + SS M
Sbjct: 1   MSSTSRAWVAAGSVAVVEALKDQGICRWNHTLKSVQNHVKNNVRSFSQAKKLSSSSSSAM 60

Query: 165 VTSQRKDGDQKQRQTEESLRKVMYLSCWGPN 73
           V++  K   +K +Q+EESLRKVMYLSCWGPN
Sbjct: 61  VSNSSKRQREKTKQSEESLRKVMYLSCWGPN 91


>ref|XP_002275464.1| PREDICTED: uncharacterized protein LOC100252779 [Vitis vinifera]
          Length = 88

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/90 (62%), Positives = 70/90 (77%)
 Frame = -3

Query: 342 MSSTSRAWVAALCVGAIEALKDQGLYRWNYAFRSLQDTAKNNIRSFSQAKRLSPTCSSMV 163
           MS   +AW+ A  VGA+EALKDQG  RWNY  RS+   AKNN+RSFSQAK+LS + S+MV
Sbjct: 1   MSHMGKAWIVAASVGAVEALKDQGFCRWNYTLRSIHQHAKNNLRSFSQAKKLSSSSSAMV 60

Query: 162 TSQRKDGDQKQRQTEESLRKVMYLSCWGPN 73
           +S+ +  D+K +Q+EESLR VMYLSCWGPN
Sbjct: 61  SSRVR--DEKAKQSEESLRTVMYLSCWGPN 88


>ref|XP_002275421.1| PREDICTED: uncharacterized protein LOC100257932 [Vitis vinifera]
          Length = 88

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/90 (62%), Positives = 70/90 (77%)
 Frame = -3

Query: 342 MSSTSRAWVAALCVGAIEALKDQGLYRWNYAFRSLQDTAKNNIRSFSQAKRLSPTCSSMV 163
           MS   +AW+ A  VGA+EALKDQG  RWNY  RS+   AKNN+RSFSQAK+LS + S+MV
Sbjct: 1   MSHMRKAWIVAASVGAVEALKDQGFCRWNYTMRSIHQHAKNNLRSFSQAKKLSSSSSAMV 60

Query: 162 TSQRKDGDQKQRQTEESLRKVMYLSCWGPN 73
           +S+ +  D+K +Q+EESLR VMYLSCWGPN
Sbjct: 61  SSRVR--DEKAKQSEESLRTVMYLSCWGPN 88


>ref|XP_002275321.1| PREDICTED: uncharacterized protein LOC100263064 [Vitis vinifera]
          Length = 88

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/90 (62%), Positives = 70/90 (77%)
 Frame = -3

Query: 342 MSSTSRAWVAALCVGAIEALKDQGLYRWNYAFRSLQDTAKNNIRSFSQAKRLSPTCSSMV 163
           MS   +AWV A  VGA+EALKDQG  RWNY  RS+   AKNN+RSFSQA++LS + S+MV
Sbjct: 1   MSHMRKAWVVAASVGAVEALKDQGFCRWNYTLRSIHQHAKNNLRSFSQARKLSSSSSAMV 60

Query: 162 TSQRKDGDQKQRQTEESLRKVMYLSCWGPN 73
           +S+ +  D+K +Q+EESLR VMYLSCWGPN
Sbjct: 61  SSRMR--DEKAKQSEESLRTVMYLSCWGPN 88


>ref|XP_002525775.1| conserved hypothetical protein [Ricinus communis]
           gi|223534925|gb|EEF36611.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 91

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/91 (61%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
 Frame = -3

Query: 342 MSSTSRAWVAALCVGAIEALKDQGLYRWNYAFRSLQDTAKNNI-RSFSQAKRLSPTCSSM 166
           MSSTSRAW+ A  +G +EALKDQGL RWNYAFRS+Q  AKNNI RS+SQ  ++  + SS 
Sbjct: 1   MSSTSRAWMVAASIGVVEALKDQGLCRWNYAFRSIQQHAKNNIRRSYSQHPKMLSSLSSS 60

Query: 165 VTSQRKDGDQKQRQTEESLRKVMYLSCWGPN 73
               +K  D+K +++EESLR VMYLSCWGPN
Sbjct: 61  ADLSKKLEDEKLKKSEESLRTVMYLSCWGPN 91


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