BLASTX nr result
ID: Coptis24_contig00011747
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011747 (1009 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [R... 227 4e-57 ref|XP_004147336.1| PREDICTED: vesicle transport protein SFT2B-l... 218 2e-54 ref|XP_002270756.1| PREDICTED: vesicle transport protein SFT2B [... 218 2e-54 ref|XP_002305352.1| predicted protein [Populus trichocarpa] gi|2... 216 9e-54 ref|XP_003548262.1| PREDICTED: vesicle transport protein SFT2B [... 215 2e-53 >ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [Ricinus communis] gi|223542999|gb|EEF44535.1| Vesicle transport protein SFT2B, putative [Ricinus communis] Length = 174 Score = 227 bits (578), Expect = 4e-57 Identities = 117/174 (67%), Positives = 132/174 (75%), Gaps = 4/174 (2%) Frame = +1 Query: 43 MERMNQAMEKMKMLVG--IXXXXXXXXXXXSSFMDEFNRNCTLSTTQRLYGFATCLMAGL 216 ME+M +AMEKMKMLVG + +SF+D+FNRNCTLST QRLYGFA C +GL Sbjct: 1 MEKMKEAMEKMKMLVGLEVEDEEPAAAEESASFLDDFNRNCTLSTKQRLYGFAICFFSGL 60 Query: 217 SCTLLSMLVFFNPIKFGITFTFGNLLSLGSLPH--RPKTQLTMMLDPVRIYATATYXXXX 390 +CTLLSMLVFFNP+KFGITFTFGNLLSLGS PK Q+TMMLDPVRIYATA + Sbjct: 61 ACTLLSMLVFFNPVKFGITFTFGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATALFLASI 120 Query: 391 XXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSEF 552 VHNKLLTL+AIVLEF AL+WYSLSYIPFARSMVSK+M CFD+EF Sbjct: 121 IIALFCALYVHNKLLTLLAIVLEFGALVWYSLSYIPFARSMVSKVMLACFDTEF 174 >ref|XP_004147336.1| PREDICTED: vesicle transport protein SFT2B-like [Cucumis sativus] gi|449508719|ref|XP_004163391.1| PREDICTED: vesicle transport protein SFT2B-like [Cucumis sativus] Length = 179 Score = 218 bits (554), Expect = 2e-54 Identities = 113/179 (63%), Positives = 129/179 (72%), Gaps = 9/179 (5%) Frame = +1 Query: 43 MERMNQAMEKMKMLVGIXXXXXXXXXXX-------SSFMDEFNRNCTLSTTQRLYGFATC 201 ME+MNQA EKMKMLVG+ S FMD+FNRNCTLST QR YGFA C Sbjct: 1 MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60 Query: 202 LMAGLSCTLLSMLVFFNPIKFGITFTFGNLLSLGSLPHR--PKTQLTMMLDPVRIYATAT 375 +AG++CTL+SMLVFFNPIKFGI FT GN+LSLGS PK Q+TMMLDPVRIYATA Sbjct: 61 FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120 Query: 376 YXXXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSEF 552 Y VHNKLLTL++++LEF ALIWYSLSYIPFARSMVSK+M +C D+EF Sbjct: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 179 >ref|XP_002270756.1| PREDICTED: vesicle transport protein SFT2B [Vitis vinifera] gi|296084822|emb|CBI27704.3| unnamed protein product [Vitis vinifera] Length = 177 Score = 218 bits (554), Expect = 2e-54 Identities = 116/177 (65%), Positives = 130/177 (73%), Gaps = 7/177 (3%) Frame = +1 Query: 43 MERMNQAMEKMKMLVGIXXXXXXXXXXXS-----SFMDEFNRNCTLSTTQRLYGFATCLM 207 ME+MN A E++K+LVG+ SFMD+FNR+CTLST QR YGFA CL Sbjct: 1 MEKMNHAFERVKILVGMEVDDDQNVAAPPDDGPFSFMDDFNRDCTLSTKQRFYGFAICLA 60 Query: 208 AGLSCTLLSMLVFFNPIKFGITFTFGNLLSLGSLPH--RPKTQLTMMLDPVRIYATATYX 381 AGL+CTLLSMLVFFNPIKFGITFTFGNLL+LGS PK Q+TMMLDPVRIYATA Y Sbjct: 61 AGLTCTLLSMLVFFNPIKFGITFTFGNLLALGSTAFLIGPKRQVTMMLDPVRIYATAIYL 120 Query: 382 XXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSEF 552 V NKLLTL+AI+LEF ALIWYSLSYIPFARSMVSKIM +CFD+EF Sbjct: 121 ASIIIALFCALYVRNKLLTLLAIMLEFGALIWYSLSYIPFARSMVSKIMVSCFDTEF 177 >ref|XP_002305352.1| predicted protein [Populus trichocarpa] gi|222848316|gb|EEE85863.1| predicted protein [Populus trichocarpa] Length = 177 Score = 216 bits (549), Expect = 9e-54 Identities = 113/177 (63%), Positives = 128/177 (72%), Gaps = 7/177 (3%) Frame = +1 Query: 43 MERMNQAMEKMKMLVGIXXXXXXXXXXXS-----SFMDEFNRNCTLSTTQRLYGFATCLM 207 M++MNQA EK+KMLVG+ +FMD+FNR+CTLST QR YGFA C Sbjct: 1 MQKMNQAFEKVKMLVGMEVEDEEEGVATVESSSFTFMDDFNRDCTLSTKQRFYGFAICFS 60 Query: 208 AGLSCTLLSMLVFFNPIKFGITFTFGNLLSLGSLPHR--PKTQLTMMLDPVRIYATATYX 381 GL+C LLSMLVFFNP+KFGITFTFGNLLSLGS PK Q++MMLDPVRIYATA Y Sbjct: 61 TGLACVLLSMLVFFNPVKFGITFTFGNLLSLGSTAFLIGPKRQVSMMLDPVRIYATALYL 120 Query: 382 XXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSEF 552 VHNKLLTL+AI+LEF ALIWYSLSYIPFAR+MVSKIM CFD+EF Sbjct: 121 ASIIIALLCALYVHNKLLTLLAIILEFGALIWYSLSYIPFARAMVSKIMLACFDTEF 177 >ref|XP_003548262.1| PREDICTED: vesicle transport protein SFT2B [Glycine max] gi|255629641|gb|ACU15168.1| unknown [Glycine max] Length = 178 Score = 215 bits (547), Expect = 2e-53 Identities = 113/178 (63%), Positives = 128/178 (71%), Gaps = 8/178 (4%) Frame = +1 Query: 43 MERMNQAMEKMKMLVGIXXXXXXXXXXXSS------FMDEFNRNCTLSTTQRLYGFATCL 204 ME+MN+A EK+K++VG+ + FMD+FNRNCTLSTTQRLYGFA C Sbjct: 1 MEKMNKAFEKVKIMVGMDAEDEDQQAAALNSSNSFAFMDDFNRNCTLSTTQRLYGFAICF 60 Query: 205 MAGLSCTLLSMLVFFNPIKFGITFTFGNLLSLGSLPHR--PKTQLTMMLDPVRIYATATY 378 AGL+CTLLSMLVFF PIKF I FT GNLLSLGS PK Q+TMMLDPVRIYATA Y Sbjct: 61 AAGLTCTLLSMLVFFKPIKFAIAFTLGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATAIY 120 Query: 379 XXXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSEF 552 VHNKLLT +AI+LEF AL+WYSLSYIPFARSMVSKIM +CFD+EF Sbjct: 121 IASMIIALFCALYVHNKLLTFLAIILEFGALVWYSLSYIPFARSMVSKIMVSCFDTEF 178