BLASTX nr result

ID: Coptis24_contig00011747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011747
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [R...   227   4e-57
ref|XP_004147336.1| PREDICTED: vesicle transport protein SFT2B-l...   218   2e-54
ref|XP_002270756.1| PREDICTED: vesicle transport protein SFT2B [...   218   2e-54
ref|XP_002305352.1| predicted protein [Populus trichocarpa] gi|2...   216   9e-54
ref|XP_003548262.1| PREDICTED: vesicle transport protein SFT2B [...   215   2e-53

>ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [Ricinus communis]
           gi|223542999|gb|EEF44535.1| Vesicle transport protein
           SFT2B, putative [Ricinus communis]
          Length = 174

 Score =  227 bits (578), Expect = 4e-57
 Identities = 117/174 (67%), Positives = 132/174 (75%), Gaps = 4/174 (2%)
 Frame = +1

Query: 43  MERMNQAMEKMKMLVG--IXXXXXXXXXXXSSFMDEFNRNCTLSTTQRLYGFATCLMAGL 216
           ME+M +AMEKMKMLVG  +           +SF+D+FNRNCTLST QRLYGFA C  +GL
Sbjct: 1   MEKMKEAMEKMKMLVGLEVEDEEPAAAEESASFLDDFNRNCTLSTKQRLYGFAICFFSGL 60

Query: 217 SCTLLSMLVFFNPIKFGITFTFGNLLSLGSLPH--RPKTQLTMMLDPVRIYATATYXXXX 390
           +CTLLSMLVFFNP+KFGITFTFGNLLSLGS      PK Q+TMMLDPVRIYATA +    
Sbjct: 61  ACTLLSMLVFFNPVKFGITFTFGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATALFLASI 120

Query: 391 XXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSEF 552
                    VHNKLLTL+AIVLEF AL+WYSLSYIPFARSMVSK+M  CFD+EF
Sbjct: 121 IIALFCALYVHNKLLTLLAIVLEFGALVWYSLSYIPFARSMVSKVMLACFDTEF 174


>ref|XP_004147336.1| PREDICTED: vesicle transport protein SFT2B-like [Cucumis sativus]
           gi|449508719|ref|XP_004163391.1| PREDICTED: vesicle
           transport protein SFT2B-like [Cucumis sativus]
          Length = 179

 Score =  218 bits (554), Expect = 2e-54
 Identities = 113/179 (63%), Positives = 129/179 (72%), Gaps = 9/179 (5%)
 Frame = +1

Query: 43  MERMNQAMEKMKMLVGIXXXXXXXXXXX-------SSFMDEFNRNCTLSTTQRLYGFATC 201
           ME+MNQA EKMKMLVG+                  S FMD+FNRNCTLST QR YGFA C
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 202 LMAGLSCTLLSMLVFFNPIKFGITFTFGNLLSLGSLPHR--PKTQLTMMLDPVRIYATAT 375
            +AG++CTL+SMLVFFNPIKFGI FT GN+LSLGS      PK Q+TMMLDPVRIYATA 
Sbjct: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120

Query: 376 YXXXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSEF 552
           Y             VHNKLLTL++++LEF ALIWYSLSYIPFARSMVSK+M +C D+EF
Sbjct: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 179


>ref|XP_002270756.1| PREDICTED: vesicle transport protein SFT2B [Vitis vinifera]
           gi|296084822|emb|CBI27704.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score =  218 bits (554), Expect = 2e-54
 Identities = 116/177 (65%), Positives = 130/177 (73%), Gaps = 7/177 (3%)
 Frame = +1

Query: 43  MERMNQAMEKMKMLVGIXXXXXXXXXXXS-----SFMDEFNRNCTLSTTQRLYGFATCLM 207
           ME+MN A E++K+LVG+                 SFMD+FNR+CTLST QR YGFA CL 
Sbjct: 1   MEKMNHAFERVKILVGMEVDDDQNVAAPPDDGPFSFMDDFNRDCTLSTKQRFYGFAICLA 60

Query: 208 AGLSCTLLSMLVFFNPIKFGITFTFGNLLSLGSLPH--RPKTQLTMMLDPVRIYATATYX 381
           AGL+CTLLSMLVFFNPIKFGITFTFGNLL+LGS      PK Q+TMMLDPVRIYATA Y 
Sbjct: 61  AGLTCTLLSMLVFFNPIKFGITFTFGNLLALGSTAFLIGPKRQVTMMLDPVRIYATAIYL 120

Query: 382 XXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSEF 552
                       V NKLLTL+AI+LEF ALIWYSLSYIPFARSMVSKIM +CFD+EF
Sbjct: 121 ASIIIALFCALYVRNKLLTLLAIMLEFGALIWYSLSYIPFARSMVSKIMVSCFDTEF 177


>ref|XP_002305352.1| predicted protein [Populus trichocarpa] gi|222848316|gb|EEE85863.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  216 bits (549), Expect = 9e-54
 Identities = 113/177 (63%), Positives = 128/177 (72%), Gaps = 7/177 (3%)
 Frame = +1

Query: 43  MERMNQAMEKMKMLVGIXXXXXXXXXXXS-----SFMDEFNRNCTLSTTQRLYGFATCLM 207
           M++MNQA EK+KMLVG+                 +FMD+FNR+CTLST QR YGFA C  
Sbjct: 1   MQKMNQAFEKVKMLVGMEVEDEEEGVATVESSSFTFMDDFNRDCTLSTKQRFYGFAICFS 60

Query: 208 AGLSCTLLSMLVFFNPIKFGITFTFGNLLSLGSLPHR--PKTQLTMMLDPVRIYATATYX 381
            GL+C LLSMLVFFNP+KFGITFTFGNLLSLGS      PK Q++MMLDPVRIYATA Y 
Sbjct: 61  TGLACVLLSMLVFFNPVKFGITFTFGNLLSLGSTAFLIGPKRQVSMMLDPVRIYATALYL 120

Query: 382 XXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSEF 552
                       VHNKLLTL+AI+LEF ALIWYSLSYIPFAR+MVSKIM  CFD+EF
Sbjct: 121 ASIIIALLCALYVHNKLLTLLAIILEFGALIWYSLSYIPFARAMVSKIMLACFDTEF 177


>ref|XP_003548262.1| PREDICTED: vesicle transport protein SFT2B [Glycine max]
           gi|255629641|gb|ACU15168.1| unknown [Glycine max]
          Length = 178

 Score =  215 bits (547), Expect = 2e-53
 Identities = 113/178 (63%), Positives = 128/178 (71%), Gaps = 8/178 (4%)
 Frame = +1

Query: 43  MERMNQAMEKMKMLVGIXXXXXXXXXXXSS------FMDEFNRNCTLSTTQRLYGFATCL 204
           ME+MN+A EK+K++VG+            +      FMD+FNRNCTLSTTQRLYGFA C 
Sbjct: 1   MEKMNKAFEKVKIMVGMDAEDEDQQAAALNSSNSFAFMDDFNRNCTLSTTQRLYGFAICF 60

Query: 205 MAGLSCTLLSMLVFFNPIKFGITFTFGNLLSLGSLPHR--PKTQLTMMLDPVRIYATATY 378
            AGL+CTLLSMLVFF PIKF I FT GNLLSLGS      PK Q+TMMLDPVRIYATA Y
Sbjct: 61  AAGLTCTLLSMLVFFKPIKFAIAFTLGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATAIY 120

Query: 379 XXXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIPFARSMVSKIMTTCFDSEF 552
                        VHNKLLT +AI+LEF AL+WYSLSYIPFARSMVSKIM +CFD+EF
Sbjct: 121 IASMIIALFCALYVHNKLLTFLAIILEFGALVWYSLSYIPFARSMVSKIMVSCFDTEF 178


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