BLASTX nr result

ID: Coptis24_contig00011732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011732
         (1437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144307.1| PREDICTED: presenilin-like protein At1g08700...   506   e-141
ref|XP_002267364.1| PREDICTED: presenilin-like protein At1g08700...   500   e-139
ref|XP_002530952.1| conserved hypothetical protein [Ricinus comm...   494   e-137
ref|XP_002892470.1| presenilin family protein [Arabidopsis lyrat...   474   e-131
ref|NP_172346.1| Presenilin-1 [Arabidopsis thaliana] gi|6093852|...   472   e-130

>ref|XP_004144307.1| PREDICTED: presenilin-like protein At1g08700-like [Cucumis sativus]
            gi|449488277|ref|XP_004157988.1| PREDICTED:
            presenilin-like protein At1g08700-like [Cucumis sativus]
          Length = 456

 Score =  506 bits (1302), Expect = e-141
 Identities = 294/457 (64%), Positives = 317/457 (69%), Gaps = 25/457 (5%)
 Frame = -1

Query: 1401 MEGSILESIGVEIIGVMSPVSICMFXXXXXXXXXXXXXXXXXP-IRTAANLVYLETPSDS 1225
            ME SILE+IGVEIIGVMSPVSICM                    IRTAANLVYLETPSDS
Sbjct: 1    MESSILETIGVEIIGVMSPVSICMLLVVLLVYSLSSADPLASAPIRTAANLVYLETPSDS 60

Query: 1224 TTQKLEGALLNAAVFVVLIAVVTFILVLLYYYNFTNFLKNYMRFSAFFVLGSMGGGIFLS 1045
             +QKLEGALLNA VFVVLIA+VTF+L+LLYYYNFTNFLKNYMRFSAFFVLGSMGG IFLS
Sbjct: 61   ASQKLEGALLNALVFVVLIALVTFLLLLLYYYNFTNFLKNYMRFSAFFVLGSMGGSIFLS 120

Query: 1044 IIQHFSIPVDSITCFMLLFNFTILGVLSVFSRGIPIFLRQGYMVLLGIIVATWFTKLPEW 865
            IIQHFSIPVDSITC +LLFNFT++GVL+VFS GIPI +RQ YMV LGIIVA WFTKLPEW
Sbjct: 121  IIQHFSIPVDSITCLILLFNFTVVGVLAVFSGGIPIIMRQSYMVFLGIIVAAWFTKLPEW 180

Query: 864  TTWXXXXXXXXXXXXXXXAPGGPLKILVELASSRDEELPALVYEARPTVARDQQGRGSLG 685
            TTW               APGGPLK+LVELASSRDEELPALVYEARPTV+R  + RG LG
Sbjct: 181  TTWSLLVALALYDLVAVLAPGGPLKLLVELASSRDEELPALVYEARPTVSRGPENRGGLG 240

Query: 684  VLVAGAFMASPSIELQ-----NVGRN-LENDSNAYRSSIQTEAYNGGEDE------ERIP 541
            +LVAG    S SIELQ     N  RN  EN  N+ R +     + G E E      ER P
Sbjct: 241  LLVAGV-SDSGSIELQAHSDNNFNRNGDENLHNSDRRAAGNHNFRGEEVERNVDEGERSP 299

Query: 540  LVSPS--STVVDVGSLGARQSEIVEERSSHVMGHEAE----------XXXXXXXXXXXXX 397
            LVS S      D GS G     +  E   H    E E                       
Sbjct: 300  LVSYSRERNSSDSGSSGYSTGVLTPEMRRHYGNRETEIHIDGELSPLVQLPSFQTQIEME 359

Query: 396  XXXXXXIMKPGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCHR 217
                  +   GI+LGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCHR
Sbjct: 360  RVAQTEVTSRGIRLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCHR 419

Query: 216  ALPALPISITLGVTFYFLTRLLMEPFVVGTSTNLLMF 106
            ALPALPISI LGV FYFLTRL+MEPFVVGT+TNL+MF
Sbjct: 420  ALPALPISIALGVMFYFLTRLVMEPFVVGTATNLMMF 456


>ref|XP_002267364.1| PREDICTED: presenilin-like protein At1g08700-like [Vitis vinifera]
          Length = 448

 Score =  500 bits (1287), Expect = e-139
 Identities = 283/454 (62%), Positives = 320/454 (70%), Gaps = 22/454 (4%)
 Frame = -1

Query: 1401 MEGSILESIGVEIIGVMSPVSICMFXXXXXXXXXXXXXXXXXP--IRTAANLVYLETPSD 1228
            M+ SIL+S+GVEIIGVMSPVS+CM                     IRTAANLVYLE+PSD
Sbjct: 1    MDSSILDSLGVEIIGVMSPVSVCMLLVVLLVYTLSSATSSAASDTIRTAANLVYLESPSD 60

Query: 1227 STTQKLEGALLNAAVFVVLIAVVTFILVLLYYYNFTNFLKNYMRFSAFFVLGSMGGGIFL 1048
            STTQKLEGALLNA VF+VLIA+VTF+LVLLYYYNFTNFLKNYMRFSAFFVLG+MGG IFL
Sbjct: 61   STTQKLEGALLNALVFIVLIAIVTFVLVLLYYYNFTNFLKNYMRFSAFFVLGTMGGSIFL 120

Query: 1047 SIIQHFSIPVDSITCFMLLFNFTILGVLSVFSRGIPIFLRQGYMVLLGIIVATWFTKLPE 868
            S+IQHFS+P+DSITCF+LLFNFT++GVLSVFS G+PIF+RQ YMV+LGIIVA WFTKLPE
Sbjct: 121  SVIQHFSVPIDSITCFLLLFNFTVVGVLSVFSNGVPIFVRQVYMVVLGIIVAAWFTKLPE 180

Query: 867  WTTWXXXXXXXXXXXXXXXAPGGPLKILVELASSRDEELPALVYEARPTVARDQQGRGS- 691
            WTTW               APGGPLK+LVELAS+RDEELPALVYEARP V+R    RGS 
Sbjct: 181  WTTWVLLVALAVYDLVAVLAPGGPLKLLVELASTRDEELPALVYEARPVVSRGPGTRGSG 240

Query: 690  -----LGVLVAGAFMASPSIELQNVGRNLENDSNAYRSSIQTEAYNGGEDEERIPLV--- 535
                 LG+LV G    S S+ELQ V ++  N S+    ++  E    GE    +P +   
Sbjct: 241  TRGSNLGLLVGGV-SESGSVELQAVSQDNRNKSDEDVGNLANEE---GETSPLVPNLRDR 296

Query: 534  ------SPSSTVVDV-----GSLGARQSEIVEERSSHVMGHEAEXXXXXXXXXXXXXXXX 388
                  S   +VV+V        G R+SEIV +     +    E                
Sbjct: 297  PTSSSGSSEYSVVNVRLDRGAQFGNRESEIVVDEEMSPLVDMLE--FGGDREQTRGEIPE 354

Query: 387  XXXIMKPGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCHRALP 208
                   GIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCHRALP
Sbjct: 355  ASMGTSRGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCHRALP 414

Query: 207  ALPISITLGVTFYFLTRLLMEPFVVGTSTNLLMF 106
            ALPISITLGV FYFLTRLLMEPFVVGTS+NL+MF
Sbjct: 415  ALPISITLGVVFYFLTRLLMEPFVVGTSSNLMMF 448


>ref|XP_002530952.1| conserved hypothetical protein [Ricinus communis]
            gi|223529467|gb|EEF31424.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 455

 Score =  494 bits (1271), Expect = e-137
 Identities = 287/468 (61%), Positives = 319/468 (68%), Gaps = 36/468 (7%)
 Frame = -1

Query: 1401 MEGSILESIGVEIIGVMSPVSICMFXXXXXXXXXXXXXXXXXP-----IRTAANLVYLET 1237
            ME SILESIGVEIIGVMSPVSICM                        IRTAANLVYLE 
Sbjct: 1    MESSILESIGVEIIGVMSPVSICMLLVVLIVYSLSPSNPFSTAASAPPIRTAANLVYLEN 60

Query: 1236 PSDSTTQKLEGALLNAAVFVVLIAVVTFILVLLYYYNFTNFLKNYMRFSAFFVLGSMGGG 1057
            PSDST QKLEG+LLNA VFV+LIAVVTF+LVLLYYYN T FLKNYMRFSAFFVLGSMGG 
Sbjct: 61   PSDSTAQKLEGSLLNALVFVILIAVVTFLLVLLYYYNCTRFLKNYMRFSAFFVLGSMGGS 120

Query: 1056 IFLSIIQHFSIPVDSITCFMLLFNFTILGVLSVFSRGIPIFLRQGYMVLLGIIVATWFTK 877
            IFLS+IQHFSIP+DS+TCF++LFNFTI+GVLSVF  GIPIF RQGYMV LGI VA WFTK
Sbjct: 121  IFLSLIQHFSIPIDSVTCFIMLFNFTIVGVLSVFGGGIPIFFRQGYMVALGIFVAAWFTK 180

Query: 876  LPEWTTWXXXXXXXXXXXXXXXAPGGPLKILVELASSRDEELPALVYEARPTVARDQQGR 697
            LPEWTTW               APGGPLK+LVELA SRDEELPALVYEARPTV+++   +
Sbjct: 181  LPEWTTWTVLVALAVYDLVAVLAPGGPLKLLVELAQSRDEELPALVYEARPTVSQNGNNQ 240

Query: 696  GSLGVLVAGAFMASPSIELQ---NVGRNL---ENDSNAYRSSI------QTEAYNGGEDE 553
            G    L+ G    S S+E+Q   N  RN    EN  N+  +SI        E    G+D 
Sbjct: 241  GRSLDLLVGGVSDSGSVEMQMVSNANRNRNESENRVNSEYTSIPVRNVGNVEGIGNGDDS 300

Query: 552  ERIPLV-------------SPSSTVVDVGSLGARQSEI-VEERSSHV-----MGHEAEXX 430
            ER PLV             S  ST+V     G R+S++ V+E +S +     +G E E  
Sbjct: 301  ERFPLVGFSRERCSSSRESSEFSTMV-----GNRESDVAVDEETSPLVDMLRLGSEREQV 355

Query: 429  XXXXXXXXXXXXXXXXXIMKPGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLG 250
                                 GIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLG
Sbjct: 356  RRDAPEDSMLASR--------GIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLG 407

Query: 249  CTLILLSVCHRALPALPISITLGVTFYFLTRLLMEPFVVGTSTNLLMF 106
            CTLILLSVC RALPALPISITLG+ FYFLTRLLMEPF+VGT+TNL+MF
Sbjct: 408  CTLILLSVCRRALPALPISITLGIIFYFLTRLLMEPFIVGTATNLMMF 455


>ref|XP_002892470.1| presenilin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297338312|gb|EFH68729.1| presenilin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 452

 Score =  474 bits (1220), Expect = e-131
 Identities = 282/458 (61%), Positives = 316/458 (68%), Gaps = 26/458 (5%)
 Frame = -1

Query: 1401 MEGSILESIGVEIIGVMSPVSICMFXXXXXXXXXXXXXXXXXPIRTAANLVYLETPSDST 1222
            ME SIL+S+GVEIIGVM+PVSICMF                  IRTAANL+Y+E PSDS 
Sbjct: 1    MESSILDSLGVEIIGVMAPVSICMFLVVLLTYSLSVTSDPQ--IRTAANLIYIENPSDSA 58

Query: 1221 TQKLEGALLNAAVFVVLIAVVTFILVLLYYYNFTNFLKNYMRFSAFFVLGSMGGGIFLSI 1042
            T KLEG+L NA VFVVL+A VTFILVLL+YYNFTNFLK+YMRFSAFFV G+MGG IFLSI
Sbjct: 59   TVKLEGSLANAIVFVVLVAAVTFILVLLFYYNFTNFLKHYMRFSAFFVSGTMGGAIFLSI 118

Query: 1041 IQHFSIPVDSITCFMLLFNFTILGVLSVFSRGIPIFLRQGYMVLLGIIVATWFTKLPEWT 862
            IQHFSIPVDSITCF+LLFNFTILG LSVF+ GIPI LRQ YMV++GI+VA WFTKLPEWT
Sbjct: 119  IQHFSIPVDSITCFILLFNFTILGTLSVFAGGIPIVLRQCYMVVMGIVVAAWFTKLPEWT 178

Query: 861  TWXXXXXXXXXXXXXXXAPGGPLKILVELASSRDEELPALVYEARPTVARDQQGR---GS 691
            TW               APGGPLK+LVELASSRDEELPA+VYEARPTV+   QGR    S
Sbjct: 179  TWFVLVALALYDLVAVLAPGGPLKLLVELASSRDEELPAMVYEARPTVSSGNQGRNRGSS 238

Query: 690  LGVLVAGAFMA-SPSIELQNV--------GR----NLENDSNAYRSSIQTEAYNGGE--D 556
            L  LV G  ++ S S+ELQ V        GR    NL+ ++ A R     +    G    
Sbjct: 239  LRALVGGGGVSDSGSVELQAVRNHDGNQLGRENTHNLDYNAVAVRDIDNVDGNGNGNRGG 298

Query: 555  EERIPLV-SP-----SSTVVDVGSLGARQSEIVEERSS--HVMGHEAEXXXXXXXXXXXX 400
             ER PLV SP     S+ V   G++  R+S I EE S    +MG                
Sbjct: 299  VERSPLVGSPGASEHSTRVGTRGNIDDRESAIDEEMSPLVELMG----WGDNREEARGLE 354

Query: 399  XXXXXXXIMKPGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCH 220
                       GIKLGLGDF+FYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSV +
Sbjct: 355  ESDNVVDSSNRGIKLGLGDFIFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVYN 414

Query: 219  RALPALPISITLGVTFYFLTRLLMEPFVVGTSTNLLMF 106
            RALPALPISI LGV FYFLTRLLMEPFVVG +TNL+MF
Sbjct: 415  RALPALPISIMLGVVFYFLTRLLMEPFVVGVTTNLMMF 452


>ref|NP_172346.1| Presenilin-1 [Arabidopsis thaliana] gi|6093852|sp|O64668.1|PSNA_ARATH
            RecName: Full=Presenilin-like protein At1g08700
            gi|9802574|gb|AAF99776.1|AC003981_26 F22O13.18
            [Arabidopsis thaliana] gi|16604521|gb|AAL24266.1|
            At1g08700/F22O13_18 [Arabidopsis thaliana]
            gi|111074460|gb|ABH04603.1| At1g08700 [Arabidopsis
            thaliana] gi|332190215|gb|AEE28336.1| Presenilin-1
            [Arabidopsis thaliana]
          Length = 453

 Score =  472 bits (1214), Expect = e-130
 Identities = 281/459 (61%), Positives = 318/459 (69%), Gaps = 27/459 (5%)
 Frame = -1

Query: 1401 MEGSILESIGVEIIGVMSPVSICMFXXXXXXXXXXXXXXXXXPIRTAANLVYLETPSDST 1222
            ME SIL+S+GVEIIGVM+PVSICMF                  IR+AANL+Y+E PSDST
Sbjct: 1    MESSILDSLGVEIIGVMAPVSICMFLVVLLTYSLSVTSDPQ--IRSAANLIYIENPSDST 58

Query: 1221 TQKLEGALLNAAVFVVLIAVVTFILVLLYYYNFTNFLKNYMRFSAFFVLGSMGGGIFLSI 1042
            T KLEG+L NA VFVVLIA VTFILVLL+YYNFTNFLK+YMRFSAFFVLG+MGG IFLSI
Sbjct: 59   TVKLEGSLANAIVFVVLIAAVTFILVLLFYYNFTNFLKHYMRFSAFFVLGTMGGAIFLSI 118

Query: 1041 IQHFSIPVDSITCFMLLFNFTILGVLSVFSRGIPIFLRQGYMVLLGIIVATWFTKLPEWT 862
            IQHFSIPVDSITCF+LLFNFTILG LSVF+ GIPI LRQ YMV++GI+VA WFTKLPEWT
Sbjct: 119  IQHFSIPVDSITCFILLFNFTILGTLSVFAGGIPIVLRQCYMVVMGIVVAAWFTKLPEWT 178

Query: 861  TWXXXXXXXXXXXXXXXAPGGPLKILVELASSRDEELPALVYEARPTVARDQQGR---GS 691
            TW               APGGPLK+LVELASSRDEELPA+VYEARPTV+   Q R    S
Sbjct: 179  TWFILVALALYDLVAVLAPGGPLKLLVELASSRDEELPAMVYEARPTVSSGNQRRNRGSS 238

Query: 690  LGVLVAGAFMA-SPSIELQNVGRN------LENDSNAYRSSIQTEAYNGGEDE------- 553
            L  LV G  ++ S S+ELQ V  +       EN  N   ++I     +  +D        
Sbjct: 239  LRALVGGGGVSDSGSVELQAVRNHDVNQLGRENSHNMDYNAIAVRDIDNVDDGIGNGSRG 298

Query: 552  --ERIPLV-SP-----SSTVVDVGSLGARQSEIVEERSS--HVMGHEAEXXXXXXXXXXX 403
              ER PLV SP     S++V   G++  R+S + EE S    +MG               
Sbjct: 299  GLERSPLVGSPSASEHSTSVGTRGNMEDRESVMDEEMSPLVELMG----WGDNREEARGL 354

Query: 402  XXXXXXXXIMKPGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVC 223
                    I   GIKLGLGDF+FYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSV 
Sbjct: 355  EESDNVVDISNRGIKLGLGDFIFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVY 414

Query: 222  HRALPALPISITLGVTFYFLTRLLMEPFVVGTSTNLLMF 106
            +RALPALPISI LGV FYFLTRLLMEPFVVG +TNL+MF
Sbjct: 415  NRALPALPISIMLGVVFYFLTRLLMEPFVVGVTTNLMMF 453


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