BLASTX nr result

ID: Coptis24_contig00011725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011725
         (1577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143346.1| PREDICTED: tRNA uridine 5-carboxymethylamino...   796   0.0  
ref|XP_004159235.1| PREDICTED: LOW QUALITY PROTEIN: tRNA uridine...   795   0.0  
ref|XP_002264011.2| PREDICTED: tRNA uridine 5-carboxymethylamino...   794   0.0  
ref|XP_003630302.1| tRNA uridine 5-carboxymethylaminomethyl modi...   787   0.0  
gb|ABF72028.1| glucose-inhibited division A family protein [Musa...   787   0.0  

>ref|XP_004143346.1| PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification
            enzyme MnmG-like [Cucumis sativus]
          Length = 730

 Score =  796 bits (2057), Expect = 0.0
 Identities = 393/467 (84%), Positives = 424/467 (90%), Gaps = 4/467 (0%)
 Frame = -3

Query: 1395 VNASTSSQDWKSSV----ERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQP 1228
            V AS+SSQDW++S     ERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQP
Sbjct: 58   VAASSSSQDWRNSAGAVDERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQP 117

Query: 1227 CNPAVGGPAKSQLVHEVDALGGDIGKIADRCYLQKRTLNLSRGPAVHALRAQTDKREYAM 1048
            CNPAVGGPAKSQLVHEVDALGG+IGK+ADRCYLQKR LN+SRGPAV ALRAQTDKREYA+
Sbjct: 118  CNPAVGGPAKSQLVHEVDALGGEIGKVADRCYLQKRVLNVSRGPAVRALRAQTDKREYAL 177

Query: 1047 EMRRVLESTPNLSIREAMVTDVLVGKNDNVEGVRTFFGMTFCAPSVVLTTGTFMSGKIWV 868
            +M+ ++E+TPNLSIREAMVTD+L+GKNDNVEGV TFFGM F A +V+LTTGTFMSGKIWV
Sbjct: 178  QMKSIVENTPNLSIREAMVTDLLLGKNDNVEGVCTFFGMNFYASAVILTTGTFMSGKIWV 237

Query: 867  GKTSMPAGRAGESASYGLTENLQSFGFETDRLKTGTPARVDSRTVDFSGLEPQHGDEEVS 688
            G+TSMPAGRAGESAS+GLTENLQ  GFE DRLKTGTPARVD RTVDFS LEPQHGD+EV+
Sbjct: 238  GRTSMPAGRAGESASHGLTENLQRLGFEIDRLKTGTPARVDCRTVDFSTLEPQHGDDEVN 297

Query: 687  WFSFDPDYHIEREQMCCYLTRTTKITHQLIRDNLHETPTYGGWVESKGPRYCPSIEDKIV 508
            WFSFDPD+HIEREQMCCYLTRTTK TH LI++NLHETPTYGGWVE+KGPRYCPSIEDKIV
Sbjct: 298  WFSFDPDFHIEREQMCCYLTRTTKSTHDLIKENLHETPTYGGWVEAKGPRYCPSIEDKIV 357

Query: 507  RFQGKDSHQIFLEPEGRTVPELYVQGFSXXXXXXXXXXXXXXXXXXENCSMLRPAYAVEY 328
            RFQ K+SHQIFLEPEGR VPELYVQGFS                  ENCSMLRPAYAVEY
Sbjct: 358  RFQDKESHQIFLEPEGRNVPELYVQGFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEY 417

Query: 327  DFLPAHQCSRSLMTKKIDGLFFSGQINGTTGYEEAAAQGIIAGVNAARCSDGKPLITLER 148
            DFLPAHQCSRSLMTKKIDGLFFSGQINGTTGYEEAAAQGI++G+NAAR SDGK LI LER
Sbjct: 418  DFLPAHQCSRSLMTKKIDGLFFSGQINGTTGYEEAAAQGILSGINAARFSDGKSLIVLER 477

Query: 147  ESSYIGTLIDDLVTKDLREPYRVLTSRSEYRLLLRADNADSRLTPLG 7
            ESSYIGTLIDDLVTKDLREPYR+LTSRSE+RLLLR+DNADSRLTPLG
Sbjct: 478  ESSYIGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLG 524


>ref|XP_004159235.1| PREDICTED: LOW QUALITY PROTEIN: tRNA uridine
            5-carboxymethylaminomethyl modification enzyme MnmG-like
            [Cucumis sativus]
          Length = 730

 Score =  795 bits (2052), Expect = 0.0
 Identities = 392/467 (83%), Positives = 423/467 (90%), Gaps = 4/467 (0%)
 Frame = -3

Query: 1395 VNASTSSQDWKSSV----ERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQP 1228
            V AS+SSQDW++S     ERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQP
Sbjct: 58   VAASSSSQDWRNSAGAVDERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQP 117

Query: 1227 CNPAVGGPAKSQLVHEVDALGGDIGKIADRCYLQKRTLNLSRGPAVHALRAQTDKREYAM 1048
            CNPAVGGPAKSQLVHEVDALGG+IGK+ADRCYLQKR LN+SRGPAV ALRAQTDKREYA+
Sbjct: 118  CNPAVGGPAKSQLVHEVDALGGEIGKVADRCYLQKRVLNVSRGPAVRALRAQTDKREYAL 177

Query: 1047 EMRRVLESTPNLSIREAMVTDVLVGKNDNVEGVRTFFGMTFCAPSVVLTTGTFMSGKIWV 868
            +M+ ++E+TPNLSIREAMVTD+L+GKNDNVEGV TFFGM F A +V+LTTGTFMSGKIWV
Sbjct: 178  QMKSIVENTPNLSIREAMVTDLLLGKNDNVEGVCTFFGMNFYASAVILTTGTFMSGKIWV 237

Query: 867  GKTSMPAGRAGESASYGLTENLQSFGFETDRLKTGTPARVDSRTVDFSGLEPQHGDEEVS 688
            G+TSMPAGRAGESAS+GLTENLQ  GFE DRLKTGTPARVD RTVDFS LEPQHGD+EV+
Sbjct: 238  GRTSMPAGRAGESASHGLTENLQRLGFEIDRLKTGTPARVDCRTVDFSTLEPQHGDDEVN 297

Query: 687  WFSFDPDYHIEREQMCCYLTRTTKITHQLIRDNLHETPTYGGWVESKGPRYCPSIEDKIV 508
            WFSFDPD+HIEREQMCCYLTRTTK TH LI++NLHETPTYGGWVE+KGPRYCPSIEDKIV
Sbjct: 298  WFSFDPDFHIEREQMCCYLTRTTKSTHDLIKENLHETPTYGGWVEAKGPRYCPSIEDKIV 357

Query: 507  RFQGKDSHQIFLEPEGRTVPELYVQGFSXXXXXXXXXXXXXXXXXXENCSMLRPAYAVEY 328
            RFQ K+SHQIFLEPEGR VPELYVQGFS                  ENCSMLRPAYAVEY
Sbjct: 358  RFQDKESHQIFLEPEGRNVPELYVQGFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEY 417

Query: 327  DFLPAHQCSRSLMTKKIDGLFFSGQINGTTGYEEAAAQGIIAGVNAARCSDGKPLITLER 148
            DFLPAHQCSRSLMTKK DGLFFSGQINGTTGYEEAAAQGI++G+NAAR SDGK LI LER
Sbjct: 418  DFLPAHQCSRSLMTKKXDGLFFSGQINGTTGYEEAAAQGILSGINAARFSDGKSLIVLER 477

Query: 147  ESSYIGTLIDDLVTKDLREPYRVLTSRSEYRLLLRADNADSRLTPLG 7
            ESSYIGTLIDDLVTKDLREPYR+LTSRSE+RLLLR+DNADSRLTPLG
Sbjct: 478  ESSYIGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLG 524


>ref|XP_002264011.2| PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification
            enzyme MnmG-like [Vitis vinifera]
          Length = 722

 Score =  794 bits (2051), Expect = 0.0
 Identities = 388/449 (86%), Positives = 416/449 (92%)
 Frame = -3

Query: 1353 ERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEVD 1174
            ERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEVD
Sbjct: 68   ERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEVD 127

Query: 1173 ALGGDIGKIADRCYLQKRTLNLSRGPAVHALRAQTDKREYAMEMRRVLESTPNLSIREAM 994
            ALGG+IGK+ADRCYLQKR LN+SRGPAV ALRAQTDKR+YA++M+ ++ES PNLSIREAM
Sbjct: 128  ALGGEIGKVADRCYLQKRVLNISRGPAVRALRAQTDKRDYALQMKNIVESCPNLSIREAM 187

Query: 993  VTDVLVGKNDNVEGVRTFFGMTFCAPSVVLTTGTFMSGKIWVGKTSMPAGRAGESASYGL 814
            VTD+L+GKNDNVEGVRTFFGM F APSV+LTTGTFMSGKIWVG+TSMPAGRAGESAS+GL
Sbjct: 188  VTDILLGKNDNVEGVRTFFGMDFYAPSVILTTGTFMSGKIWVGRTSMPAGRAGESASHGL 247

Query: 813  TENLQSFGFETDRLKTGTPARVDSRTVDFSGLEPQHGDEEVSWFSFDPDYHIEREQMCCY 634
            TENLQ  GFETDRLKTGTPARVD RTVDFSGLEPQHGDEEVSWFSFDPD+HIEREQMCCY
Sbjct: 248  TENLQRLGFETDRLKTGTPARVDCRTVDFSGLEPQHGDEEVSWFSFDPDFHIEREQMCCY 307

Query: 633  LTRTTKITHQLIRDNLHETPTYGGWVESKGPRYCPSIEDKIVRFQGKDSHQIFLEPEGRT 454
            LTRTTK THQLI++NLHETPTYGGWVE+KGPRYCPSIEDKIVRFQ K+SHQIFLEPEGR 
Sbjct: 308  LTRTTKSTHQLIKENLHETPTYGGWVEAKGPRYCPSIEDKIVRFQDKESHQIFLEPEGRN 367

Query: 453  VPELYVQGFSXXXXXXXXXXXXXXXXXXENCSMLRPAYAVEYDFLPAHQCSRSLMTKKID 274
            VPELYVQGFS                  ENCSMLRPAYAVEYDFLPA+QCSRSLMTK+I+
Sbjct: 368  VPELYVQGFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEYDFLPAYQCSRSLMTKQIE 427

Query: 273  GLFFSGQINGTTGYEEAAAQGIIAGVNAARCSDGKPLITLERESSYIGTLIDDLVTKDLR 94
            GLFFSGQINGTTGYEEAAAQG+I+G+NAAR SDGK LI LERESSYIGTLIDDLVTKDLR
Sbjct: 428  GLFFSGQINGTTGYEEAAAQGLISGINAARYSDGKSLIVLERESSYIGTLIDDLVTKDLR 487

Query: 93   EPYRVLTSRSEYRLLLRADNADSRLTPLG 7
            EPYR+LTSRSE+RLLLR+DNADSRLTPLG
Sbjct: 488  EPYRMLTSRSEHRLLLRSDNADSRLTPLG 516


>ref|XP_003630302.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG
            [Medicago truncatula] gi|355524324|gb|AET04778.1| tRNA
            uridine 5-carboxymethylaminomethyl modification enzyme
            mnmG [Medicago truncatula]
          Length = 727

 Score =  787 bits (2033), Expect = 0.0
 Identities = 392/466 (84%), Positives = 420/466 (90%), Gaps = 2/466 (0%)
 Frame = -3

Query: 1398 TVNASTSSQD--WKSSVERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQPC 1225
            TV +++SS+D  ++   E+YDVIVVGGGHAGCEAALASARLGA+TLLLTLNIDRIAWQPC
Sbjct: 58   TVTSASSSRDLDYEFGTEKYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPC 117

Query: 1224 NPAVGGPAKSQLVHEVDALGGDIGKIADRCYLQKRTLNLSRGPAVHALRAQTDKREYAME 1045
            NPAVG PAKSQLVHEVDALGGDIGKIADRCYLQKR LN S+GPAV ALRAQTDKREYA+ 
Sbjct: 118  NPAVGAPAKSQLVHEVDALGGDIGKIADRCYLQKRVLNSSKGPAVRALRAQTDKREYALV 177

Query: 1044 MRRVLESTPNLSIREAMVTDVLVGKNDNVEGVRTFFGMTFCAPSVVLTTGTFMSGKIWVG 865
            M+ V+ESTPNLSIREAMVTD+L+GKNDNVEGV TFFGM F APSV+LTTGTFMSGKIWVG
Sbjct: 178  MKNVVESTPNLSIREAMVTDILLGKNDNVEGVCTFFGMKFYAPSVILTTGTFMSGKIWVG 237

Query: 864  KTSMPAGRAGESASYGLTENLQSFGFETDRLKTGTPARVDSRTVDFSGLEPQHGDEEVSW 685
            +TSMPAGRAGESAS+GLTENLQ  GFETDRLKTGTPARVD RTVDFSGLE Q GDEEVSW
Sbjct: 238  RTSMPAGRAGESASHGLTENLQQLGFETDRLKTGTPARVDIRTVDFSGLESQPGDEEVSW 297

Query: 684  FSFDPDYHIEREQMCCYLTRTTKITHQLIRDNLHETPTYGGWVESKGPRYCPSIEDKIVR 505
            FSFDPD HIEREQMCCYLTRTT  THQ+IRDNLHETPTYGGWVE+KGPRYCPSIEDKIVR
Sbjct: 298  FSFDPDVHIEREQMCCYLTRTTSATHQIIRDNLHETPTYGGWVEAKGPRYCPSIEDKIVR 357

Query: 504  FQGKDSHQIFLEPEGRTVPELYVQGFSXXXXXXXXXXXXXXXXXXENCSMLRPAYAVEYD 325
            FQ K+SHQIFLEPEGR VPELYVQGFS                  ENCSMLRPAYAVEYD
Sbjct: 358  FQDKESHQIFLEPEGRDVPELYVQGFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEYD 417

Query: 324  FLPAHQCSRSLMTKKIDGLFFSGQINGTTGYEEAAAQGIIAGVNAARCSDGKPLITLERE 145
            +LPAHQCSRSLMTKKI+GLFFSGQINGTTGYEEAAAQGII+G+NAAR +DGK LI LERE
Sbjct: 418  YLPAHQCSRSLMTKKIEGLFFSGQINGTTGYEEAAAQGIISGINAARHADGKSLIVLERE 477

Query: 144  SSYIGTLIDDLVTKDLREPYRVLTSRSEYRLLLRADNADSRLTPLG 7
            SSYIGTLIDDLVTKDLREPYR+LTSRSE+RLLLR+DNADSRLTPLG
Sbjct: 478  SSYIGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLG 523


>gb|ABF72028.1| glucose-inhibited division A family protein [Musa acuminata]
          Length = 638

 Score =  787 bits (2032), Expect = 0.0
 Identities = 387/465 (83%), Positives = 419/465 (90%)
 Frame = -3

Query: 1398 TVNASTSSQDWKSSVERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQPCNP 1219
            T  A     + K+  E+YDVIVVGGGHAGCEAALA+ARLGA+TLLLTLNIDRIAWQPCNP
Sbjct: 63   TTLAQGGKDNSKAIEEQYDVIVVGGGHAGCEAALAAARLGARTLLLTLNIDRIAWQPCNP 122

Query: 1218 AVGGPAKSQLVHEVDALGGDIGKIADRCYLQKRTLNLSRGPAVHALRAQTDKREYAMEMR 1039
            AVGGPAKSQLVHEVDALGG+IGKIADRCYLQKR LN S+GPAV ALRAQTDKREYA+EM+
Sbjct: 123  AVGGPAKSQLVHEVDALGGEIGKIADRCYLQKRVLNRSKGPAVRALRAQTDKREYALEMK 182

Query: 1038 RVLESTPNLSIREAMVTDVLVGKNDNVEGVRTFFGMTFCAPSVVLTTGTFMSGKIWVGKT 859
            +V+EST NL IREAMVT++LVGKND VEGV TFFGM F APSVVLTTGTFMSGKIWVG+T
Sbjct: 183  KVVESTTNLFIREAMVTNILVGKNDTVEGVSTFFGMNFYAPSVVLTTGTFMSGKIWVGRT 242

Query: 858  SMPAGRAGESASYGLTENLQSFGFETDRLKTGTPARVDSRTVDFSGLEPQHGDEEVSWFS 679
            SMPAGRAGESAS+GLTE+LQ  GFETDRLKTGTPARVD R+V+FSGLEPQHGDEEV+WFS
Sbjct: 243  SMPAGRAGESASHGLTESLQQLGFETDRLKTGTPARVDYRSVNFSGLEPQHGDEEVNWFS 302

Query: 678  FDPDYHIEREQMCCYLTRTTKITHQLIRDNLHETPTYGGWVESKGPRYCPSIEDKIVRFQ 499
            FDPDYH+EREQMCCYLTRTTK THQLI+DNLHETPTYGGWVE+KGPRYCPSIEDKIVRFQ
Sbjct: 303  FDPDYHVEREQMCCYLTRTTKDTHQLIKDNLHETPTYGGWVEAKGPRYCPSIEDKIVRFQ 362

Query: 498  GKDSHQIFLEPEGRTVPELYVQGFSXXXXXXXXXXXXXXXXXXENCSMLRPAYAVEYDFL 319
             KDSHQIFLEPEGRTVP+LYVQGFS                  ENC MLRPAYAVEYD+L
Sbjct: 363  DKDSHQIFLEPEGRTVPDLYVQGFSTGLPERLQLTLLRTLPGLENCLMLRPAYAVEYDYL 422

Query: 318  PAHQCSRSLMTKKIDGLFFSGQINGTTGYEEAAAQGIIAGVNAARCSDGKPLITLERESS 139
            PAHQCSRSLMTKK++GLFFSGQINGTTGYEEAAAQG+I+G+NAAR SDGK +I LERESS
Sbjct: 423  PAHQCSRSLMTKKLEGLFFSGQINGTTGYEEAAAQGLISGINAARHSDGKSIIILERESS 482

Query: 138  YIGTLIDDLVTKDLREPYRVLTSRSEYRLLLRADNADSRLTPLGW 4
            YIGTLIDDLVTKDLREPYR+LTSRSE+RLLLRADNADSRLTPLGW
Sbjct: 483  YIGTLIDDLVTKDLREPYRMLTSRSEHRLLLRADNADSRLTPLGW 527


Top