BLASTX nr result

ID: Coptis24_contig00011724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011724
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549307.1| PREDICTED: aberrant root formation protein 4...    82   1e-13
ref|XP_003604590.1| Aberrant root formation protein [Medicago tr...    77   2e-12
ref|XP_002282976.2| PREDICTED: aberrant root formation protein 4...    77   3e-12
emb|CBI21098.3| unnamed protein product [Vitis vinifera]               77   3e-12
ref|XP_002515461.1| Aberrant root formation protein, putative [R...    76   5e-12

>ref|XP_003549307.1| PREDICTED: aberrant root formation protein 4-like [Glycine max]
          Length = 730

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/57 (64%), Positives = 46/57 (80%)
 Frame = -2

Query: 603 KAYTEWLLPLRAVVSRIMAENEKDCCEFEVDDICAFNPLQLVLHRCIELIEEKLQQS 433
           KAY EWLLPLR +V+ IMAE+  D  EF VD +C  NPL+LVL+RCIEL++EKL+QS
Sbjct: 673 KAYNEWLLPLRTLVTGIMAESHSDYDEFAVDTVCTLNPLELVLYRCIELVDEKLKQS 729


>ref|XP_003604590.1| Aberrant root formation protein [Medicago truncatula]
           gi|355505645|gb|AES86787.1| Aberrant root formation
           protein [Medicago truncatula]
          Length = 564

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 34/56 (60%), Positives = 43/56 (76%)
 Frame = -2

Query: 603 KAYTEWLLPLRAVVSRIMAENEKDCCEFEVDDICAFNPLQLVLHRCIELIEEKLQQ 436
           K Y EWLLPLR +V+ IM EN+ D  E  +D +C  NPL+LVL+RCIEL+EEKL+Q
Sbjct: 507 KVYNEWLLPLRTLVTGIMVENKSDYDELAIDTLCTLNPLELVLYRCIELVEEKLKQ 562


>ref|XP_002282976.2| PREDICTED: aberrant root formation protein 4-like [Vitis vinifera]
          Length = 668

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/56 (62%), Positives = 45/56 (80%)
 Frame = -2

Query: 603 KAYTEWLLPLRAVVSRIMAENEKDCCEFEVDDICAFNPLQLVLHRCIELIEEKLQQ 436
           KAY EWLLPLR +V+ I AEN+ D  +  VD +CA NP++LVL+RCIEL+EEKL+Q
Sbjct: 613 KAYNEWLLPLRTLVTGIEAENKNDYDQLVVDMVCALNPVELVLYRCIELVEEKLKQ 668


>emb|CBI21098.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/56 (62%), Positives = 45/56 (80%)
 Frame = -2

Query: 603 KAYTEWLLPLRAVVSRIMAENEKDCCEFEVDDICAFNPLQLVLHRCIELIEEKLQQ 436
           KAY EWLLPLR +V+ I AEN+ D  +  VD +CA NP++LVL+RCIEL+EEKL+Q
Sbjct: 551 KAYNEWLLPLRTLVTGIEAENKNDYDQLVVDMVCALNPVELVLYRCIELVEEKLKQ 606


>ref|XP_002515461.1| Aberrant root formation protein, putative [Ricinus communis]
           gi|223545405|gb|EEF46910.1| Aberrant root formation
           protein, putative [Ricinus communis]
          Length = 369

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 32/57 (56%), Positives = 47/57 (82%)
 Frame = -2

Query: 603 KAYTEWLLPLRAVVSRIMAENEKDCCEFEVDDICAFNPLQLVLHRCIELIEEKLQQS 433
           +AY++W LPLR VV+ I+AEN+ D  +F ++ +CA NP++LVL+RCIEL+EEKL+ S
Sbjct: 312 QAYSQWFLPLRTVVTGILAENKNDHDQFAINTVCALNPVELVLYRCIELVEEKLKHS 368


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