BLASTX nr result

ID: Coptis24_contig00011715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011715
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145017.1| PREDICTED: tubulin-specific chaperone A-like...    61   8e-08
ref|XP_002270593.1| PREDICTED: tubulin-specific chaperone A [Vit...    57   2e-06
ref|XP_002523979.1| tubulin-specific chaperone A (tubulin-foldin...    56   3e-06
ref|NP_001048513.2| Os02g0816500 [Oryza sativa Japonica Group] g...    55   6e-06
ref|XP_002319219.1| tubulin folding cofactor [Populus trichocarp...    55   8e-06

>ref|XP_004145017.1| PREDICTED: tubulin-specific chaperone A-like isoform 2 [Cucumis
           sativus] gi|449470626|ref|XP_004153017.1| PREDICTED:
           tubulin-specific chaperone A-like isoform 2 [Cucumis
           sativus]
          Length = 102

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/43 (67%), Positives = 36/43 (83%)
 Frame = -2

Query: 351 LFDQENVLAESRMMIPDCRKRLEASLADIKESLVS*LLTITKH 223
           L  QENVLAESRMM+PDC KRLE +LAD+K++LVS ++T T H
Sbjct: 48  LKQQENVLAESRMMVPDCHKRLEFALADLKDALVSIIITFTFH 90


>ref|XP_002270593.1| PREDICTED: tubulin-specific chaperone A [Vitis vinifera]
           gi|147854591|emb|CAN82778.1| hypothetical protein
           VITISV_011414 [Vitis vinifera]
           gi|297734639|emb|CBI16690.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -2

Query: 351 LFDQENVLAESRMMIPDCRKRLEASLADIKESL 253
           L  QENVLAESRMMIPDCRKRLEASLAD+K +L
Sbjct: 48  LKQQENVLAESRMMIPDCRKRLEASLADLKGTL 80


>ref|XP_002523979.1| tubulin-specific chaperone A (tubulin-folding cofactor A) (cfa),
           putative [Ricinus communis] gi|223536706|gb|EEF38347.1|
           tubulin-specific chaperone A (tubulin-folding cofactor
           A) (cfa), putative [Ricinus communis]
          Length = 113

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -2

Query: 351 LFDQENVLAESRMMIPDCRKRLEASLADIKESLV 250
           L  QENVLAESRMMIPDCRKRLEA++AD+K +LV
Sbjct: 48  LKQQENVLAESRMMIPDCRKRLEAAIADLKGTLV 81


>ref|NP_001048513.2| Os02g0816500 [Oryza sativa Japonica Group]
           gi|47848186|dbj|BAD22013.1| putative tubulin folding
           cofactor A [Oryza sativa Japonica Group]
           gi|255671353|dbj|BAF10427.2| Os02g0816500 [Oryza sativa
           Japonica Group]
          Length = 90

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = -2

Query: 351 LFDQENVLAESRMMIPDCRKRLEASLADIKESLVS 247
           L  QENVLAESRMM+PDC KRLE +LAD+K +LVS
Sbjct: 48  LKQQENVLAESRMMVPDCHKRLETALADLKATLVS 82


>ref|XP_002319219.1| tubulin folding cofactor [Populus trichocarpa]
           gi|118482709|gb|ABK93273.1| unknown [Populus
           trichocarpa] gi|222857595|gb|EEE95142.1| tubulin folding
           cofactor [Populus trichocarpa]
          Length = 115

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -2

Query: 351 LFDQENVLAESRMMIPDCRKRLEASLADIKESL 253
           L  QENVLAESRMMIPDCRKRLEA+LAD+K  L
Sbjct: 50  LKQQENVLAESRMMIPDCRKRLEAALADLKAIL 82


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