BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011713
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                  80   3e-13
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                  76   7e-12
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]              75   1e-11
ref|XP_002527588.1| hypothetical protein RCOM_1568080 [Ricinus c...    75   2e-11
ref|XP_002528720.1| conserved hypothetical protein [Ricinus comm...    75   2e-11

>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 31/75 (41%), Positives = 52/75 (69%)
 Frame = +2

Query: 446 IKIDVPTFDGKLDPDEFIDWLNQIEKAFDYKNLDDGKKVKLAATKLKGYALVWWDELNLR 625
           IK+++P F G L+PD+ ++W+  +EK F+YKN +D K  K+A  KLKGYA +W+D L  +
Sbjct: 90  IKVEIPEFSGSLNPDDLLEWIRDVEKIFEYKNYNDVKACKVAVLKLKGYASLWYDNLKHQ 149

Query: 626 RVNQGYRRVCTWASM 670
           R+ +G   + +W+ +
Sbjct: 150 RLKEGKDPLRSWSKL 164


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 29/76 (38%), Positives = 48/76 (63%)
 Frame = +2

Query: 443 DIKIDVPTFDGKLDPDEFIDWLNQIEKAFDYKNLDDGKKVKLAATKLKGYALVWWDELNL 622
           D+K+++P F G L+P++ +DW   IE+ F++K   DGK  K+A  KLKGYA +W++ L  
Sbjct: 87  DLKVEIPDFHGSLNPEDLLDWFRTIERVFEFKGYSDGKAFKVAILKLKGYASLWYENLKN 146

Query: 623 RRVNQGYRRVCTWASM 670
           +R   G   + +W  +
Sbjct: 147 QRRRDGKEPIKSWLKL 162


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
 Frame = +2

Query: 374 QNIDNGVVDVNRFLRILERSQAGD----IKIDVPTFDGKLDPDEFIDWLNQIEKAFDYKN 541
           QN ++G  D     R   R Q GD    IKI VPTF GK DP+ +++W  ++E+ F+  N
Sbjct: 46  QNSNDGSGDEEERRR--RRRQGGDNLRGIKIKVPTFVGKSDPEAYLEWETKLEQIFNCHN 103

Query: 542 LDDGKKVKLAATKLKGYALVWWDELNLRRVNQGYRRVCTWASM 670
             + +KV++A+ + K YALVWWD+L   R     R + TW  M
Sbjct: 104 YSNLEKVQVASIEFKEYALVWWDQLTKDRRRYAERPIDTWEEM 146


>ref|XP_002527588.1| hypothetical protein RCOM_1568080 [Ricinus communis]
           gi|223533034|gb|EEF34796.1| hypothetical protein
           RCOM_1568080 [Ricinus communis]
          Length = 136

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 32/77 (41%), Positives = 47/77 (61%)
 Frame = +2

Query: 440 GDIKIDVPTFDGKLDPDEFIDWLNQIEKAFDYKNLDDGKKVKLAATKLKGYALVWWDELN 619
           G IK+ +P+F G+ DPD +++W  ++E  F+  N  + KKVKLAA +   YA+VWWD+  
Sbjct: 14  GSIKMKIPSFQGRNDPDVYLEWERKVELIFECHNYSEEKKVKLAAVEFSDYAIVWWDQFC 73

Query: 620 LRRVNQGYRRVCTWASM 670
             R   G R V +W  M
Sbjct: 74  KERRRYGERPVESWIEM 90


>ref|XP_002528720.1| conserved hypothetical protein [Ricinus communis]
           gi|223531814|gb|EEF33632.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 37/114 (32%), Positives = 58/114 (50%)
 Frame = +2

Query: 329 EKYDHFNYFDEDYGIQNIDNGVVDVNRFLRILERSQAGDIKIDVPTFDGKLDPDEFIDWL 508
           E  D  + +D++   Q      VD NR        +   ++ ++P F G L  +EF+DWL
Sbjct: 14  EDEDLGDEYDDEVPRQRQRPNAVDNNR-------CRESGMRTEIPEFHGSLQAEEFLDWL 66

Query: 509 NQIEKAFDYKNLDDGKKVKLAATKLKGYALVWWDELNLRRVNQGYRRVCTWASM 670
             +E+  D+K + + K V L AT+LKG A+ WW +  L R   G  ++ TW  M
Sbjct: 67  ATVEEILDFKGVQEDKCVPLVATRLKGRAIAWWQQSKLTRTRLGKDKIATWEKM 120