BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011712
         (1437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521772.1| conserved hypothetical protein [Ricinus comm...   115   3e-23
ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vit...   107   1e-20
ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|2...   103   9e-20
ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23...   103   1e-19
ref|XP_004171022.1| PREDICTED: F-box/kelch-repeat protein At3g23...    91   6e-16

>ref|XP_002521772.1| conserved hypothetical protein [Ricinus communis]
            gi|223538985|gb|EEF40582.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 413

 Score =  115 bits (288), Expect = 3e-23
 Identities = 111/411 (27%), Positives = 172/411 (41%), Gaps = 37/411 (9%)
 Frame = -2

Query: 1247 ISDEKESHWVAPYFVVDIIFNIFTRVPAHKVQEVRYSCKEWYDVMNSSRFTLTHLHHSNP 1068
            + DE+    V PYF  D I NI  R+P   +Q  R+ CK WY ++NSS F   HL  S  
Sbjct: 25   VEDEQNKQHV-PYFHKDCISNILIRLPLQSLQSSRFVCKLWYSIINSSIFIDAHLRRSES 83

Query: 1067 SLIAIPIV-------MVLPVKEGVRY-VRPDIIQIH------EKKRLKPRKFVDNTCEFV 930
             LI +  V          P +E   + V    +Q +      E       KF     EF 
Sbjct: 84   VLIYVKPVPNKRYSATSKPPEESNNFSVEASFLQSNSGSIFAEPIMNSAPKFCIQFVEFK 143

Query: 929  DKTCKF----------VVDTCNGLVLLEDVV--GNLYISNPATGEMLTFPPCVQRSECLD 786
            +   K           +  TCNGL+LL++ +  G L + NP T +++  P     S   D
Sbjct: 144  EGNMKIGEYNVNCLGNIRATCNGLILLDNKLKKGGLIVMNPVTRKLIALPLGTIYSP-QD 202

Query: 785  VLRALSYIDSTGEYKVVSVVKNKAGLLECEMIGLGSITRKMVSSPFGRILRWSLVQHNSI 606
                 +  D+TGEYKVV + +++ G + CE + L +   K V+ P   + RW    +  +
Sbjct: 203  ESYGFALSDTTGEYKVVHLFRDELGYVSCETLNLRARFWKEVNGPSFGLFRW--FGYRPV 260

Query: 605  TIKGLFHFMFCGAYKVHSRCESRYVVSFDIVEEKFYISEVPDFPNRNEKLHKMDGCLSVA 426
               G  H+       +     + Y+VS ++  EKF+   +P     ++++ +M G L   
Sbjct: 261  AALGALHW-------IPQVDHNDYLVSMEVDNEKFHSVPLPKSCRIHDRIIEMGGLLCFV 313

Query: 425  VPNRKKICYRWEIWALKDPYGGEWCKQYSIN-------LAVCGKKFHKVWPFTRLVATLE 267
                  I    +IW L+   G  W KQYSI        + +C  +      F R     +
Sbjct: 314  THEELNI----DIWNLRSLSGDVWTKQYSITRGSIIDMVPICSLRIGGELIFKR-----D 364

Query: 266  NDRFWIITSPVSGFQFYIYDFQLQLLRPIEID----PIRSYIVRPHVESLV 126
             D             FY YD +L+ +R +E+D    P     + PHV SL+
Sbjct: 365  EDG-----------SFYSYDCRLKEMRKVEMDKKCLPFHGTYL-PHVNSLI 403


>ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vitis vinifera]
          Length = 417

 Score =  107 bits (266), Expect = 1e-20
 Identities = 109/416 (26%), Positives = 176/416 (42%), Gaps = 32/416 (7%)
 Frame = -2

Query: 1265 NLEEITISDEKESHWVAPYFVVDIIFNIFTRVPAHKVQEVRYSCKEWYDVMNSSRFTLTH 1086
            ++EE  +S + E   V PY   D   NI  R+P   +   R  CK WY ++NS  F   H
Sbjct: 16   SVEERALSKKVEEKQV-PYLPKDCFSNILVRLPIESLPSSRLVCKPWYKLINSPIFIDAH 74

Query: 1085 LHHSNPSLIAI-PIVM------------VLPVKEGVRYVRPDIIQI------HEKKRLKP 963
            L  S   LI + PIV             +   K     V  +++Q+      H+      
Sbjct: 75   LRRSEVVLIFLTPIVKQETYLYPFSTRSISQEKPNTFSVEVNLLQLESTPLFHQPVIDPR 134

Query: 962  RKFVDNTCEFVDKTCKF----------VVDTCNGLVLLEDVV--GNLYISNPATGEMLTF 819
            RK      E  D   K           +  + NGL+LLE+ +  G L + NP T ++   
Sbjct: 135  RKSYIQFMEIKDGKSKIGEFNISCMGEITASFNGLILLENKLKRGRLVVMNPVTRKLTEL 194

Query: 818  P-PCVQRSECLDVLRALSYIDSTGEYKVVSVVKNKAGLLECEMIGLGSITRKMVSSPFGR 642
            P   + +        ALSY  ST EYKVV +  ++   + CE++ +G+ T + V+ P   
Sbjct: 195  PLGTLSQPHQESYGFALSY--STSEYKVVHLFHDELRYINCEILNVGTRTWRPVNGPSFG 252

Query: 641  ILRWSLVQHNSITIKGLFHFMFCGAYKVHSRCESRYVVSFDIVEEKFYISEVPDFPNRNE 462
            ++ W    +  ++  G  H+       V    ++ Y+VS  +  EKF+  ++P     ++
Sbjct: 253  LISW--FGYKPVSAMGALHW-------VPHINDNDYIVSLHLENEKFHTVQLPKSYRTHD 303

Query: 461  KLHKMDGCLSVAVPNRKKICYRWEIWALKDPYGGEWCKQYSINLAVCGKKFHKVWPFTRL 282
             + +M G L     + + +  +  IW+LK   G  W KQ+ I           + P   +
Sbjct: 304  GIVEMGGSLCFVSHDEEML--QIGIWSLKGLSGEGWTKQHCITTGC----ILDMVPLFSM 357

Query: 281  VATLENDRFWIITSPVSGFQFYIYDFQLQLLRPIEIDPIRSYIVRPHVESLVRCLP 114
              T E     ++         Y YDFQLQ++R I+++   S    PHV SLV   P
Sbjct: 358  RTTEE-----MVFKRDEDGSLYAYDFQLQVMRKIDMETPLSDCYLPHVNSLVSWCP 408


>ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|222835655|gb|EEE74090.1|
            predicted protein [Populus trichocarpa]
          Length = 426

 Score =  103 bits (258), Expect = 9e-20
 Identities = 110/434 (25%), Positives = 179/434 (41%), Gaps = 48/434 (11%)
 Frame = -2

Query: 1271 SNNLEEITISDEKESHWV------APYFVVDIIFNIFTRVPAHKVQEVRYSCKEWYDVMN 1110
            S ++EE  +S + E          APYF  D I NI   +P   +   R+ CK WY+++N
Sbjct: 13   SKSVEERALSKKMEDDQKKLPAGPAPYFHKDCISNILIWLPLESLPSSRFVCKPWYNIIN 72

Query: 1109 SSRFTLTHLHHSNPSLIAI---------------PIVMVLPVKEGVRYVRPDIIQIHEKK 975
            S  F  +H   S   LI +               P  M    +E       ++  +    
Sbjct: 73   SRTFIDSHFRRSESVLIFLKSVSRGRSYPYSRPDPFSMTSMPEEQGNTFSVEVALLQSNL 132

Query: 974  RLKP----------RKFVDNTCEFVD---KTCKFVVD-------TCNGLVLLED-VVGNL 858
            +  P           KF     EF +   K  K+ V        TCNGL+LL++ V   L
Sbjct: 133  KTVPIFGPHVTGSSSKFFIQFMEFKEGKIKVGKYNVSCLGNIRATCNGLILLDNHVKKGL 192

Query: 857  YISNPATGEMLTFPP---CVQRSECLDVLRALSYIDSTGEYKVVSVVKNKAGLLECEMIG 687
             + NP T +++T P    C    E      AL+++  TG+YK+V + +++   + CE + 
Sbjct: 193  IVMNPVTRKLITLPLGTLCNYHKESYGF--ALNHV--TGDYKLVHLFRDEFEYVTCETLD 248

Query: 686  LGSITRKMVSSPFGRILRWSLVQHNSITIKGLFHFMFCGAYKVHSRCESRYVVSFDIVEE 507
            L + + + V+ P   +  W    H  ++  G  H+       +     S ++VS ++  E
Sbjct: 249  LATRSWRAVNGPSFGLFNW--FGHAPVSAIGALHW-------IPQLDNSDFIVSMEVENE 299

Query: 506  KFYISEVPDFPNRNEKLHKMDGCLSVAVPNRKKICYRWEIWALKDPYGGEWCKQYSINLA 327
            +F+   +P     ++++ +M G L         I    +IW LK    G W KQYSI   
Sbjct: 300  RFHCIPLPHRCTTHDRVMEMGGLLCFVTHEDLNI----DIWNLKSVPEGIWTKQYSITK- 354

Query: 326  VCGKKFHKVWPFTRLVATLENDRFWIITSPVSGFQFYIYDFQLQLLRPIEIDPIR---SY 156
              G     V  F+     +  D   +I        F+ YDF+ +++R  E+D  R   S 
Sbjct: 355  --GSLIDMVPLFS---LRISGD---VIFRRKEDGSFHAYDFKSEVMREFEMDKERNLSSG 406

Query: 155  IVRPHVESLVRCLP 114
               PHV SL+   P
Sbjct: 407  AYLPHVNSLLSWTP 420


>ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
            sativus]
          Length = 401

 Score =  103 bits (256), Expect = 1e-19
 Identities = 109/423 (25%), Positives = 173/423 (40%), Gaps = 32/423 (7%)
 Frame = -2

Query: 1298 SREDLSIENSNNLEEITISDEKESHWVAPYFVVDIIFNIFTRVPAHKVQEVRYSCKEWYD 1119
            SR     E   N+EE      K+   + PY   D + NI  R+P   +    + CK W++
Sbjct: 2    SRSAKKSELVRNVEE----KRKQQESLIPYVHEDCVSNILIRLPLDSLHRSMFVCKHWFN 57

Query: 1118 VMNSSRFTLTHLHHSNPSLIAIP----------IVMVLPV--KEGVRYVRPDIIQIHEK- 978
            ++ S  F  TH H S   LI             +   LP   K     +    +Q  E  
Sbjct: 58   IICSPTFVETHFHRSESVLIFTAPTRYEETSHHLTPSLPHSGKSNTLSIEAKYMQSSESL 117

Query: 977  ---KRLKP--RKFVD---------NTCEFVDKTCKFVVDTCNGLVLLEDV--VGNLYISN 846
                 L+P  ++F+          N  E+       +  TCNGL+LL++   +G L + N
Sbjct: 118  SLFHNLEPTSKRFIQFLEFQDGISNVGEYSLSCFGQIRATCNGLILLDNKLKIGGLIVIN 177

Query: 845  PATGEMLTFPPCVQRSECLDVLRALSYIDSTGEYKVVSVVKNKAGLLECEMIGLGSITRK 666
            P T ++   PP    S   +     +Y + +G YKVV + ++    + CE+  LG+   +
Sbjct: 178  PVTRKLTALPPGTLNSSHNESY-GFAYDNISGRYKVVHLFRDALMYISCEIFILGTENWR 236

Query: 665  MVSSPFGRILRWSLVQHNSITIKGLFHFMFCGAYKVHSRCESRYVVSFDIVEEKFYISEV 486
             V  P   +  W    +  +   G  H++       HS C    + S +I  EKF    +
Sbjct: 237  AVDGPPFGLFGW--FGYKPVEAIGALHWI---PQVNHSDC----IASLEIENEKFQTIPL 287

Query: 485  PDFPNRNEKLHKMDGCLSVAVPNRKKICYRWEIWALKDPYGGEWCKQYSINLAVCGKKFH 306
            P+  NR + + ++   LS             +IW LK   G  W KQ+SIN+  C     
Sbjct: 288  PNSCNRYDGIVEIGSSLSYVTHMET----HTDIWILKGLSGEIWIKQHSINIG-CRMDMV 342

Query: 305  KVWPFTRLVATLENDRFWIITSPVSGFQFYIYDFQLQLLRPIEIDP---IRSYIVRPHVE 135
             +  F      +  D   +I     GF FYIYDF+L+ +  +E      + S  + PHV 
Sbjct: 343  PLLSF-----RIRGD---LIFKSKDGF-FYIYDFELRSITKVEDKKRLRVSSDFLFPHVN 393

Query: 134  SLV 126
            S+V
Sbjct: 394  SMV 396


>ref|XP_004171022.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
            sativus]
          Length = 390

 Score = 91.3 bits (225), Expect = 6e-16
 Identities = 89/352 (25%), Positives = 143/352 (40%), Gaps = 29/352 (8%)
 Frame = -2

Query: 1298 SREDLSIENSNNLEEITISDEKESHWVAPYFVVDIIFNIFTRVPAHKVQEVRYSCKEWYD 1119
            SR     E   N+EE      K+   + PY   D + NI  R+P   +    + CK W++
Sbjct: 2    SRSAKKSELVRNVEE----KRKQQESLIPYVHEDCVSNILIRLPLDSLHRSMFVCKHWFN 57

Query: 1118 VMNSSRFTLTHLHHSNPSLIAIP----------IVMVLPV--KEGVRYVRPDIIQIHEK- 978
            ++ S  F  TH H S   LI             +   LP   K     +    +Q  E  
Sbjct: 58   IICSPTFVETHFHRSESVLIFTAPTRYEETSHHLTPSLPHSGKSNTLSIEAKYMQSSESL 117

Query: 977  ---KRLKP--RKFVD---------NTCEFVDKTCKFVVDTCNGLVLLEDV--VGNLYISN 846
                 L+P  ++F+          N  E+       +  TCNGL+LL++   +G L + N
Sbjct: 118  SLFHNLEPTSKRFIQFLEFQDGISNVGEYSLSCFGQIRATCNGLILLDNKLKIGGLIVIN 177

Query: 845  PATGEMLTFPPCVQRSECLDVLRALSYIDSTGEYKVVSVVKNKAGLLECEMIGLGSITRK 666
            P T ++   PP    S   +     +Y + +G YKVV + ++    + CE+  LG+   +
Sbjct: 178  PVTRKLTALPPGTLNSSHNESY-GFAYDNVSGRYKVVHLFRDALMYISCEIFILGTENWR 236

Query: 665  MVSSPFGRILRWSLVQHNSITIKGLFHFMFCGAYKVHSRCESRYVVSFDIVEEKFYISEV 486
             V  P   +  W    +  +   G  H++       HS C    + S +I  EKF    +
Sbjct: 237  AVDGPPFGLFGW--FGYKPVEAIGALHWI---PQVNHSDC----IASLEIENEKFQTIPL 287

Query: 485  PDFPNRNEKLHKMDGCLSVAVPNRKKICYRWEIWALKDPYGGEWCKQYSINL 330
            P+  NR + + ++   LS             +IW LK   G  W KQ+SIN+
Sbjct: 288  PNSCNRYDGIVEIGSSLSYVTHMET----HTDIWILKGLSGEIWIKQHSINI 335