BLASTX nr result
ID: Coptis24_contig00011708
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011708 (1242 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24272.3| unnamed protein product [Vitis vinifera] 235 2e-59 ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi... 235 2e-59 ref|XP_002277668.1| PREDICTED: 42 kDa peptidyl-prolyl isomerase ... 194 3e-47 ref|XP_002313312.1| predicted protein [Populus trichocarpa] gi|1... 191 4e-46 emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera] 189 1e-45 >emb|CBI24272.3| unnamed protein product [Vitis vinifera] Length = 729 Score = 235 bits (599), Expect = 2e-59 Identities = 109/141 (77%), Positives = 129/141 (91%) Frame = +3 Query: 48 ALPGACRIHCNPELAEYAAGYLFELEPTYSGNYILLANIYSAAGRWGDAARIRRLMKARG 227 +L GACRIHCNP+LAEYAA YLFELEP SGNY+L+ANIYSAAGRW DAA+IR LMK RG Sbjct: 531 SLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERG 590 Query: 228 VTKPPGCSWIEVKRRVHSFIVGDTSHSLVDEISAKMNNLYSEIKEIGYVPDTKYVLQNLE 407 VTKPPGCSWIEVKR++HSF+VGDTSH L+++ISAKM +LY +IKEIGYVPDT +VLQ+++ Sbjct: 591 VTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVD 650 Query: 408 EDEKEDSLCGHSKKLAIAFGL 470 EDEKE SLCGHS+K+A+AFGL Sbjct: 651 EDEKEFSLCGHSEKIALAFGL 671 Score = 196 bits (497), Expect(2) = 7e-57 Identities = 93/120 (77%), Positives = 109/120 (90%), Gaps = 1/120 (0%) Frame = +3 Query: 771 RGLMKARGVTKPPGCSWIEVKRRVHSFIVGGTSHSLVDEISAKMNNLYSEIKEIGYVPDT 950 R LMK RGVTKPPGCSWIEVKR++HSF+VG TSH L+++ISAKM +LY +IKEIGYVPDT Sbjct: 583 RCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDT 642 Query: 951 KYVLQNLEEDEKD-SLCGHSEKLAIAFGLISTPNGTPLRIIKNLRVCGDCHKATKFISKL 1127 +VLQ+++EDEK+ SLCGHSEK+A+AFGLIST GTPLRIIKNLRVCGDCH ATKFISK+ Sbjct: 643 NFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKV 702 Score = 52.8 bits (125), Expect(2) = 7e-57 Identities = 21/24 (87%), Positives = 23/24 (95%) Frame = +2 Query: 1133 REIIMRDCYRFHHFVEGVCSCGDY 1204 R+IIMRD YRFHHFV+GVCSCGDY Sbjct: 705 RDIIMRDNYRFHHFVDGVCSCGDY 728 >ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Vitis vinifera] Length = 972 Score = 235 bits (599), Expect = 2e-59 Identities = 109/141 (77%), Positives = 129/141 (91%) Frame = +3 Query: 48 ALPGACRIHCNPELAEYAAGYLFELEPTYSGNYILLANIYSAAGRWGDAARIRRLMKARG 227 +L GACRIHCNP+LAEYAA YLFELEP SGNY+L+ANIYSAAGRW DAA+IR LMK RG Sbjct: 774 SLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERG 833 Query: 228 VTKPPGCSWIEVKRRVHSFIVGDTSHSLVDEISAKMNNLYSEIKEIGYVPDTKYVLQNLE 407 VTKPPGCSWIEVKR++HSF+VGDTSH L+++ISAKM +LY +IKEIGYVPDT +VLQ+++ Sbjct: 834 VTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVD 893 Query: 408 EDEKEDSLCGHSKKLAIAFGL 470 EDEKE SLCGHS+K+A+AFGL Sbjct: 894 EDEKEFSLCGHSEKIALAFGL 914 Score = 196 bits (497), Expect(2) = 7e-57 Identities = 93/120 (77%), Positives = 109/120 (90%), Gaps = 1/120 (0%) Frame = +3 Query: 771 RGLMKARGVTKPPGCSWIEVKRRVHSFIVGGTSHSLVDEISAKMNNLYSEIKEIGYVPDT 950 R LMK RGVTKPPGCSWIEVKR++HSF+VG TSH L+++ISAKM +LY +IKEIGYVPDT Sbjct: 826 RCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDT 885 Query: 951 KYVLQNLEEDEKD-SLCGHSEKLAIAFGLISTPNGTPLRIIKNLRVCGDCHKATKFISKL 1127 +VLQ+++EDEK+ SLCGHSEK+A+AFGLIST GTPLRIIKNLRVCGDCH ATKFISK+ Sbjct: 886 NFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKV 945 Score = 52.8 bits (125), Expect(2) = 7e-57 Identities = 21/24 (87%), Positives = 23/24 (95%) Frame = +2 Query: 1133 REIIMRDCYRFHHFVEGVCSCGDY 1204 R+IIMRD YRFHHFV+GVCSCGDY Sbjct: 948 RDIIMRDNYRFHHFVDGVCSCGDY 971 >ref|XP_002277668.1| PREDICTED: 42 kDa peptidyl-prolyl isomerase isoform 2 [Vitis vinifera] gi|225450075|ref|XP_002277645.1| PREDICTED: 42 kDa peptidyl-prolyl isomerase isoform 1 [Vitis vinifera] gi|297736282|emb|CBI24920.3| unnamed protein product [Vitis vinifera] Length = 365 Score = 194 bits (494), Expect = 3e-47 Identities = 90/102 (88%), Positives = 98/102 (96%) Frame = +1 Query: 466 AWTESTQHKFEDTWQEQRPIEMVLGKEKNQMTGLAIAVASMKSGECALLHVGWELGYGKE 645 AWTESTQHKFEDTW EQRP+E+V+GKEK +MTGLAI V++MKSGE ALLHVGWELGYGKE Sbjct: 78 AWTESTQHKFEDTWNEQRPVEIVIGKEKKEMTGLAIGVSNMKSGERALLHVGWELGYGKE 137 Query: 646 GSFSFPNVPPMADLIYEVELIGFDETKEGKARGDMTVEERIG 771 GSFSFPNVPPMAD++YEVELIGFDETKEGKARGDMTVEERIG Sbjct: 138 GSFSFPNVPPMADILYEVELIGFDETKEGKARGDMTVEERIG 179 >ref|XP_002313312.1| predicted protein [Populus trichocarpa] gi|118485759|gb|ABK94729.1| unknown [Populus trichocarpa] gi|222849720|gb|EEE87267.1| predicted protein [Populus trichocarpa] Length = 369 Score = 191 bits (484), Expect = 4e-46 Identities = 88/102 (86%), Positives = 95/102 (93%) Frame = +1 Query: 466 AWTESTQHKFEDTWQEQRPIEMVLGKEKNQMTGLAIAVASMKSGECALLHVGWELGYGKE 645 AWTESTQHKF+DTW EQRP EMVLGKEKN+M GLA+ V+SMK+GE ALLHVGWELGYGKE Sbjct: 75 AWTESTQHKFDDTWHEQRPFEMVLGKEKNEMAGLAVGVSSMKAGERALLHVGWELGYGKE 134 Query: 646 GSFSFPNVPPMADLIYEVELIGFDETKEGKARGDMTVEERIG 771 G+FSFPNVPPMAD+IYEVELIGFDE KEGKARGDMT EERIG Sbjct: 135 GNFSFPNVPPMADIIYEVELIGFDEVKEGKARGDMTAEERIG 176 >emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera] Length = 929 Score = 189 bits (481), Expect = 1e-45 Identities = 93/141 (65%), Positives = 110/141 (78%) Frame = +3 Query: 48 ALPGACRIHCNPELAEYAAGYLFELEPTYSGNYILLANIYSAAGRWGDAARIRRLMKARG 227 +L GACRIHCNP+LAEYAA YLFELEP SGNY+L+ANIYSAAGRW DAA+IR LMK RG Sbjct: 774 SLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERG 833 Query: 228 VTKPPGCSWIEVKRRVHSFIVGDTSHSLVDEISAKMNNLYSEIKEIGYVPDTKYVLQNLE 407 VTKPPGCSWIEVKR++HSF+VGDTSH L+++IS K L +++ Sbjct: 834 VTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISGKDGKL------------------DVD 875 Query: 408 EDEKEDSLCGHSKKLAIAFGL 470 EDEKE SLCGHS+K+A+AFGL Sbjct: 876 EDEKEFSLCGHSEKIALAFGL 896 Score = 123 bits (308), Expect = 1e-25 Identities = 65/106 (61%), Positives = 77/106 (72%), Gaps = 1/106 (0%) Frame = +3 Query: 771 RGLMKARGVTKPPGCSWIEVKRRVHSFIVGGTSHSLVDEISAKMNNLYSEIKEIGYVPDT 950 R LMK RGVTKPPGCSWIEVKR++HSF+VG TSH L+++IS K L Sbjct: 826 RCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISGKDGKL------------- 872 Query: 951 KYVLQNLEEDEKD-SLCGHSEKLAIAFGLISTPNGTPLRIIKNLRV 1085 +++EDEK+ SLCGHSEK+A+AFGLIST GTPLRIIKNLRV Sbjct: 873 -----DVDEDEKEFSLCGHSEKIALAFGLISTTXGTPLRIIKNLRV 913