BLASTX nr result

ID: Coptis24_contig00011704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011704
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521840.1| PREDICTED: exocyst complex component 3-like ...   243   9e-63
gb|AAF43235.1|AC012654_19 EST gb|AA712174 comes from this gene [...   243   2e-62
ref|NP_001185374.1| protein SEC6 [Arabidopsis thaliana] gi|33219...   243   2e-62
ref|XP_002887391.1| hypothetical protein ARALYDRAFT_476305 [Arab...   243   2e-62
ref|XP_002268285.2| PREDICTED: exocyst complex component 3-like ...   243   2e-62

>ref|XP_003521840.1| PREDICTED: exocyst complex component 3-like [Glycine max]
          Length = 756

 Score =  243 bits (621), Expect = 9e-63
 Identities = 119/138 (86%), Positives = 128/138 (92%)
 Frame = -3

Query: 416 RRLTELASDIGLEPLCALINNNLRCYDLAMELSSSTMEALPQNYFEQVNFEDTCKGFLEV 237
           +RL E AS+IGLEPLCA+INNNLRCYDLAMELS+ST+EALPQNY EQVNFEDTCKGFLEV
Sbjct: 483 KRLEEPASEIGLEPLCAMINNNLRCYDLAMELSNSTIEALPQNYAEQVNFEDTCKGFLEV 542

Query: 236 AKEAVHQTVSVIFENPGVQELLAKLYQKDWLEALVSEYLVETFDDYFSDVKMYIEERSFR 57
           AKEAVHQTVSVIFE+PGVQELL KLYQK+W E  V+EYLV TF DYF DVKMYIEERSFR
Sbjct: 543 AKEAVHQTVSVIFEDPGVQELLVKLYQKEWSEGQVTEYLVATFGDYFGDVKMYIEERSFR 602

Query: 56  RFVEACLEETVVLYVDHL 3
           RFVEACLEETVV+YVDHL
Sbjct: 603 RFVEACLEETVVVYVDHL 620


>gb|AAF43235.1|AC012654_19 EST gb|AA712174 comes from this gene [Arabidopsis thaliana]
          Length = 739

 Score =  243 bits (619), Expect = 2e-62
 Identities = 117/138 (84%), Positives = 128/138 (92%)
 Frame = -3

Query: 416 RRLTELASDIGLEPLCALINNNLRCYDLAMELSSSTMEALPQNYFEQVNFEDTCKGFLEV 237
           +R+ E ASDIGLEPLCA+INNNLRCYDLAMELS+ST+EALPQNY EQVNFEDTCKGFLEV
Sbjct: 466 KRVDEPASDIGLEPLCAMINNNLRCYDLAMELSNSTLEALPQNYAEQVNFEDTCKGFLEV 525

Query: 236 AKEAVHQTVSVIFENPGVQELLAKLYQKDWLEALVSEYLVETFDDYFSDVKMYIEERSFR 57
           AKEAVHQTV VIFE+PGVQELL KLYQK+W E  V+EYLV TF DYF+DVKMY+EERSFR
Sbjct: 526 AKEAVHQTVRVIFEDPGVQELLVKLYQKEWCEGQVTEYLVATFGDYFTDVKMYVEERSFR 585

Query: 56  RFVEACLEETVVLYVDHL 3
           RFVEACLEETVV+YVDHL
Sbjct: 586 RFVEACLEETVVVYVDHL 603


>ref|NP_001185374.1| protein SEC6 [Arabidopsis thaliana] gi|332197116|gb|AEE35237.1|
           protein SEC6 [Arabidopsis thaliana]
          Length = 774

 Score =  243 bits (619), Expect = 2e-62
 Identities = 117/138 (84%), Positives = 128/138 (92%)
 Frame = -3

Query: 416 RRLTELASDIGLEPLCALINNNLRCYDLAMELSSSTMEALPQNYFEQVNFEDTCKGFLEV 237
           +R+ E ASDIGLEPLCA+INNNLRCYDLAMELS+ST+EALPQNY EQVNFEDTCKGFLEV
Sbjct: 501 KRVDEPASDIGLEPLCAMINNNLRCYDLAMELSNSTLEALPQNYAEQVNFEDTCKGFLEV 560

Query: 236 AKEAVHQTVSVIFENPGVQELLAKLYQKDWLEALVSEYLVETFDDYFSDVKMYIEERSFR 57
           AKEAVHQTV VIFE+PGVQELL KLYQK+W E  V+EYLV TF DYF+DVKMY+EERSFR
Sbjct: 561 AKEAVHQTVRVIFEDPGVQELLVKLYQKEWCEGQVTEYLVATFGDYFTDVKMYVEERSFR 620

Query: 56  RFVEACLEETVVLYVDHL 3
           RFVEACLEETVV+YVDHL
Sbjct: 621 RFVEACLEETVVVYVDHL 638


>ref|XP_002887391.1| hypothetical protein ARALYDRAFT_476305 [Arabidopsis lyrata subsp.
           lyrata] gi|297333232|gb|EFH63650.1| hypothetical protein
           ARALYDRAFT_476305 [Arabidopsis lyrata subsp. lyrata]
          Length = 785

 Score =  243 bits (619), Expect = 2e-62
 Identities = 117/138 (84%), Positives = 128/138 (92%)
 Frame = -3

Query: 416 RRLTELASDIGLEPLCALINNNLRCYDLAMELSSSTMEALPQNYFEQVNFEDTCKGFLEV 237
           +R+ E ASDIGLEPLCA+INNNLRCYDLAMELS+ST+EALPQNY EQVNFEDTCKGFLEV
Sbjct: 512 KRVDEPASDIGLEPLCAMINNNLRCYDLAMELSNSTLEALPQNYAEQVNFEDTCKGFLEV 571

Query: 236 AKEAVHQTVSVIFENPGVQELLAKLYQKDWLEALVSEYLVETFDDYFSDVKMYIEERSFR 57
           AKEAVHQTV VIFE+PGVQELL KLYQK+W E  V+EYLV TF DYF+DVKMY+EERSFR
Sbjct: 572 AKEAVHQTVRVIFEDPGVQELLVKLYQKEWCEGQVTEYLVATFGDYFTDVKMYVEERSFR 631

Query: 56  RFVEACLEETVVLYVDHL 3
           RFVEACLEETVV+YVDHL
Sbjct: 632 RFVEACLEETVVVYVDHL 649


>ref|XP_002268285.2| PREDICTED: exocyst complex component 3-like [Vitis vinifera]
           gi|298204486|emb|CBI23761.3| unnamed protein product
           [Vitis vinifera]
          Length = 756

 Score =  243 bits (619), Expect = 2e-62
 Identities = 119/138 (86%), Positives = 128/138 (92%)
 Frame = -3

Query: 416 RRLTELASDIGLEPLCALINNNLRCYDLAMELSSSTMEALPQNYFEQVNFEDTCKGFLEV 237
           RRL E AS+IGLE LCA+INNNLRCYDLA+ELSSST+EALPQNY EQVNFEDTCKGFLEV
Sbjct: 483 RRLEEPASEIGLESLCAMINNNLRCYDLALELSSSTLEALPQNYAEQVNFEDTCKGFLEV 542

Query: 236 AKEAVHQTVSVIFENPGVQELLAKLYQKDWLEALVSEYLVETFDDYFSDVKMYIEERSFR 57
           AKEAVHQTVSVIFE+PGVQELL KLYQK+W E  V+EYLV TF DYF+DVKMYIEERSFR
Sbjct: 543 AKEAVHQTVSVIFEDPGVQELLVKLYQKEWCEGQVTEYLVATFGDYFTDVKMYIEERSFR 602

Query: 56  RFVEACLEETVVLYVDHL 3
           RFVEACLEETVV+YVDHL
Sbjct: 603 RFVEACLEETVVVYVDHL 620


Top