BLASTX nr result

ID: Coptis24_contig00011693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011693
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524665.1| PREDICTED: nuA4 complex subunit EAF3 homolog...    87   2e-15
ref|XP_002524929.1| chromatin binding protein, putative [Ricinus...    86   2e-15
ref|XP_003550033.1| PREDICTED: nuA4 complex subunit EAF3 homolog...    86   3e-15
gb|ABK26286.1| unknown [Picea sitchensis]                              86   3e-15
ref|XP_002283618.1| PREDICTED: mortality factor 4-like protein 1...    85   7e-15

>ref|XP_003524665.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]
          Length = 319

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 4/73 (5%)
 Frame = -1

Query: 209 MGSSNRDNESDTDFNEPKTDQESD----FIEGEKVLAYHGPCIYKAKVQKVELSREEGKY 42
           MG+S++DN+S T  +    D +      + EGEKVLAYHGP IY+AKVQK E+ + E KY
Sbjct: 1   MGNSSKDNDSATSADASAGDVQPSNSAVYSEGEKVLAYHGPRIYEAKVQKAEIRKSEWKY 60

Query: 41  YVHYLGWNKSWDE 3
           +VHYLGW+K+WDE
Sbjct: 61  FVHYLGWSKNWDE 73


>ref|XP_002524929.1| chromatin binding protein, putative [Ricinus communis]
           gi|223535764|gb|EEF37426.1| chromatin binding protein,
           putative [Ricinus communis]
          Length = 318

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
 Frame = -1

Query: 209 MGSSNRDN---ESDTDFNEPKTDQESDFIEGEKVLAYHGPCIYKAKVQKVELSREEGKYY 39
           MGSS++D+   + +T   +        F EGE+VLAYHGP IY+AKVQK EL ++E +Y+
Sbjct: 1   MGSSSKDDSGSDGETSSGDAPPSNSGIFSEGERVLAYHGPRIYEAKVQKAELRKKEWRYF 60

Query: 38  VHYLGWNKSWDE 3
           VHYLGWNK+WDE
Sbjct: 61  VHYLGWNKNWDE 72


>ref|XP_003550033.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]
          Length = 319

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/73 (54%), Positives = 52/73 (71%), Gaps = 4/73 (5%)
 Frame = -1

Query: 209 MGSSNRDNESDTDFNEPKTD----QESDFIEGEKVLAYHGPCIYKAKVQKVELSREEGKY 42
           MG+S++DN+S T  +    D        + EGEKVLAYHGP IY+AKVQK E+ + E KY
Sbjct: 1   MGNSSKDNDSATSADASAGDIPPSNSGVYSEGEKVLAYHGPRIYEAKVQKTEIRKSEWKY 60

Query: 41  YVHYLGWNKSWDE 3
           +VHYLGW+K+WDE
Sbjct: 61  FVHYLGWSKNWDE 73


>gb|ABK26286.1| unknown [Picea sitchensis]
          Length = 280

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 6/69 (8%)
 Frame = -1

Query: 191 DNESDT------DFNEPKTDQESDFIEGEKVLAYHGPCIYKAKVQKVELSREEGKYYVHY 30
           D+ +DT      D +E    Q S F EGEKVLAYHGP IY+AKVQ+ EL ++E KYYVHY
Sbjct: 22  DHNNDTKVKDNMDEDEAIKQQSSHFKEGEKVLAYHGPLIYEAKVQRAELRKKEWKYYVHY 81

Query: 29  LGWNKSWDE 3
           LGW+K+WDE
Sbjct: 82  LGWSKNWDE 90


>ref|XP_002283618.1| PREDICTED: mortality factor 4-like protein 1 [Vitis vinifera]
           gi|296087392|emb|CBI33766.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
 Frame = -1

Query: 209 MGSSNRD------NESDTDFNEPKTDQESDFIEGEKVLAYHGPCIYKAKVQKVELSREEG 48
           MGSSN         ++DT   +        F EGEKVLAYHGP IY+AKVQK E  ++E 
Sbjct: 1   MGSSNTGVKDDSTTDADTSTGDLPASNSGTFSEGEKVLAYHGPRIYEAKVQKAEFRKKEW 60

Query: 47  KYYVHYLGWNKSWDE 3
           +Y+VHYLGWNK+WDE
Sbjct: 61  RYFVHYLGWNKNWDE 75


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