BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011682
         (1528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   145   2e-32
ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   133   1e-28
ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   125   3e-26
ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   122   2e-25
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-24

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  145 bits (367), Expect = 2e-32
 Identities = 135/425 (31%), Positives = 205/425 (48%), Gaps = 20/425 (4%)
 Frame = -1

Query: 1495 ISNLPEPILSRIVSLLPLEDAIKTTSLSKKWLNVCTSLTNIEFDQVKFDRWARGKRQFKD 1316
            I NLP+ +L  I+S L  E A++T+ LSKKWL++  S TN+ F  +K  +    ++ F D
Sbjct: 28   IGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTFFGLKSPK----RKLFMD 83

Query: 1315 FVNQTLVLHGGLDIDKFSIYIDIGAISMSNVNSWIYFAVNHNVKE--VDIAGYYGYFEKL 1142
            FV++ L L G  +I +F +  ++     S V +WI  AVN NVK+  +++  +   F  L
Sbjct: 84   FVDRVLALRGPSNIVQFYLSCEV-KDDPSRVGTWISAAVNRNVKDLYLELRDFEASF-VL 141

Query: 1141 PCCLFTCGTLRVL--TLEYVNLQLPTMVGLPKLKSLKIKFVRFFDENSTAQLFSSCPLLE 968
            P CLF C TL  L   + Y+ L+LP+ + L  LK L +  V F D++ST QLF S P L 
Sbjct: 142  PHCLFNCETLTELEINMPYI-LKLPSSISLSCLKILNLYEVIFTDDHSTQQLF-SLPNLV 199

Query: 967  ELVISNCCFKDMNVSCIVEISSPSLKSVTVLSFYLPPVKISTSNL--CNIRYYGN----- 809
            EL I  C + ++     V IS+P L+S+ +      P + S ++L  C++R +G      
Sbjct: 200  ELEIHECNWMNL---VAVSISAPKLQSLDIHE----PCQSSPASLGGCHVRIFGTHLADF 252

Query: 808  ------PPEICLETLSSLSNV--DFEFTSRLRIYYTRASAILMGLQNVVRMVLRGCFIEL 653
                    + CL   S +      F    + R    RAS +L G+ +   + L    +++
Sbjct: 253  TIIGTLSNDYCLYESSVVETCISIFSAADKPRQTAYRASKLLEGISSAQSLCLTTNVVDV 312

Query: 652  LSRNEGSSARLPTSCFSLEYLQLDVKPSKEQVQVVILLLRNYPNLKHLRI-SVKEPTRRL 476
            L  +       P    +L  L  + + S         ++ N P+L  L+   V  P    
Sbjct: 313  LD-DAPELLAFPLEFRNLTSLLFESEESNLHSDGFWHIIYNSPHLIALQFYGVSMPKVPS 371

Query: 475  NLHELWXXXXXXXXXXXXGSSMDILDHLKTVDVESFGGSKIELDLVRYLLKNANILEKLN 296
            N  E W             S    L  LK + V  FGG + ELD V +LLKNA  LE ++
Sbjct: 372  NCREDW---------TLDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMD 422

Query: 295  IIYSG 281
            IIYSG
Sbjct: 423  IIYSG 427


>ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355477724|gb|AES58927.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 428

 Score =  133 bits (334), Expect = 1e-28
 Identities = 117/449 (26%), Positives = 207/449 (46%), Gaps = 10/449 (2%)
 Frame = -1

Query: 1501 DMISNLPEPILSRIVSLLPLEDAIKTTSLSKKWLNVCTSLTNIEFDQVKFDRWARGKRQF 1322
            D IS L   ++ +I+S LP+ +A++T+ LS KW     ++ N+ FD+      ++    F
Sbjct: 7    DRISYLLGDVIDKILSHLPIREAVRTSVLSNKWRYKWATIPNLVFDKQCVSATSKCSELF 66

Query: 1321 KD-------FVNQTLVLHGGLDIDKFSI-YIDIGAISMSNVNSWIYFAVNHNVKEVDIAG 1166
             D        ++Q L+L+ G  I+KF I    +  IS + ++ WI+     ++KE+ +  
Sbjct: 67   LDMEGKLMEIIDQVLLLYSG-PINKFQISRCGVNLISETALDRWIFHLTKRSIKELVLQI 125

Query: 1165 YYGYFEKLPCCLFTCGTLRVLTLEYVNLQLP-TMVGLPKLKSLKIKFVRFFDENSTAQLF 989
                  K+P CLF+C +L  LTL Y  L+ P T+ GL  LKSL +  V    + +   L 
Sbjct: 126  SERKLYKIPWCLFSCQSLHHLTLYYCLLKPPSTIEGLKNLKSLDLDHVS-MSQYAFENLI 184

Query: 988  SSCPLLEELVISNCCFKDMNVSCIVEISSPSLKSVTVLSFYLPPVKISTSNLCNIRYYGN 809
            SSCPLLE L ++     +++    + I +P+LK + +   +     IS  N   + Y   
Sbjct: 185  SSCPLLENLTLT-----ELDGFTQINIHAPNLKVLDICGKF---EDISFDNTFQLDYVFV 236

Query: 808  PPEICLETLSSLSNVDFEFTSRLRIYYTRASAILMGLQNVVRMVLRGCFIELLSRNEGSS 629
               + L + S+ S +    ++ L  +          L ++  +V+ G F++ L+      
Sbjct: 237  DLSLYLNSESNQSRLHGSPSNLLNFF--------AHLHHIHGLVINGYFLKYLAAG-AVP 287

Query: 628  ARLPTSCFSLEYLQLDVK-PSKEQVQVVILLLRNYPNLKHLRISVKEPTRRLNLHELWXX 452
             +LPT C +L YL   +     +++   + + R+ PNLK L I  K   + + L   +  
Sbjct: 288  VKLPTPCINLTYLWFSINFYDFKEISTALCVFRSSPNLKELNIFAKHEKKTIVLAPAFFC 347

Query: 451  XXXXXXXXXXGSSMDILDHLKTVDVESFGGSKIELDLVRYLLKNANILEKLNIIYSGKNG 272
                           +L  ++ V +E   G K ELD +R+LL ++ +LEK+ +  +   G
Sbjct: 348  WEDIFL------EPSMLTRVRHVGIEGISGIKSELDFMRFLLLHSPVLEKMRVKPNFNVG 401

Query: 271  KKDDVXXXXXXXXXXXSFTKASLSAEISF 185
             K               F +AS  AE+ +
Sbjct: 402  SK--------LMSELLRFKRASAQAEVVY 422


>ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355477725|gb|AES58928.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 657

 Score =  125 bits (314), Expect = 3e-26
 Identities = 97/341 (28%), Positives = 171/341 (50%), Gaps = 6/341 (1%)
 Frame = -1

Query: 1501 DMISNLPEPILSRIVSLLPLEDAIKTTSLSKKWLNVCTSLTNIEFDQ----VKFDRWARG 1334
            D IS LP  ++ RI+S LP+ D ++T+ LS KW     ++ N+ FD        +  A  
Sbjct: 323  DRISVLPGDVIDRILSCLPIRDVVRTSILSNKWRYKWITIPNLVFDSQCVSATSEHPAAI 382

Query: 1333 KRQFKDFVNQTLVLHGGLDIDKFSIYIDIGAISMSNVNSWIYFAVNHNVKEVDIAGYYGY 1154
            KR+    ++  L+L+ G  I+KF +    G IS + ++ WI+     ++KE+ +    G 
Sbjct: 383  KRKLLAIIDHVLLLYYG-PINKFKLS-PFGLISATALDRWIFHLTRRSIKELVLGLSIGQ 440

Query: 1153 FEKLPCCLFTCGTLRVLTLEYVNLQLPTMV-GLPKLKSLKIKFVRFFDENSTAQLFSSCP 977
              K+P CLF+C +L  LTL    L+ P+M+ GL  LKSL +  V    +++   L SSCP
Sbjct: 441  SYKIPWCLFSCQSLHYLTLFSCLLKPPSMIEGLKNLKSLYLVKVT-ISQDAFESLISSCP 499

Query: 976  LLEELVISNCCFKDMNVSCIVEISSPSLKSVTVLSFYLPPVKISTSNLCNIRYYGNPPEI 797
            LLE+L+++     + +    + I +P+L  + ++  +     IS  N   + Y      +
Sbjct: 500  LLEKLMLA-----EFDGFTQINIHAPNLNGLGIVGKF---EDISFENTYLLNYVIVDLSL 551

Query: 796  CLETLSSLSNVDFEFTSRLRIYYTRASAILMGLQNVVRMVLRGCFIELLSRNEGSSARLP 617
            CL + S+ S +    ++ L  +          + ++ ++ +RG F + L+       +LP
Sbjct: 552  CLNSESNHSRLQGSSSNLLNFF--------AHIHHIYKLDIRGYFFKYLAAGV-VPVKLP 602

Query: 616  TSCFSLEYLQLDVK-PSKEQVQVVILLLRNYPNLKHLRISV 497
            T C +L YL L +     +++   + + R+ PNLK L I V
Sbjct: 603  TPCINLTYLWLSINFYDLKEISTALCVFRSSPNLKELNIFV 643



 Score = 91.7 bits (226), Expect = 5e-16
 Identities = 90/340 (26%), Positives = 155/340 (45%), Gaps = 7/340 (2%)
 Frame = -1

Query: 1501 DMISNLPEPILSRIVSLLPLEDAIKTTSLSKKWLNVCTSLTNIEFDQVKFDRWARG---- 1334
            D IS LP  ++ RI+  LP+ D ++T+ L  KW    T++ N+ FD+      +      
Sbjct: 7    DRISCLPGDVIDRILLRLPIRDVVRTSVLCNKWRYKWTTIPNLVFDKQCVSATSHRPLVI 66

Query: 1333 KRQFKDFVNQTLVLHGGLDIDKFSIYIDIGAISMSNVNSWIYFAVNHNVKEVDIAGYYGY 1154
            +R+    ++  L+L+ G  I+KF                        ++K++ I    G 
Sbjct: 67   ERKLLAIIDHVLLLYSG-PINKF----------------------KRSIKKLVIEISKGQ 103

Query: 1153 FEKLPCCLFTCGTLRVLTLEYVNLQLP-TMVGLPKLKSLKIKFVRFFDENSTAQLFSSCP 977
              K+P CLF+C +L  L+L Y  L+ P T+VG   LKSL++       +++   L   CP
Sbjct: 104  PYKIPWCLFSCQSLLHLSLSYGLLKPPSTIVGFKNLKSLELDHFT-MSQDAFENLLFGCP 162

Query: 976  LLEELVISNCCFKDMNVSCIVEISSPSLKSVTVLSFYLPPVKISTSNLCNIRYYGNPPEI 797
            LLE+L+     F +      + I++P+LKS+ +   +     IS  N   +        +
Sbjct: 163  LLEKLI-----FDEFEGFTKININAPNLKSLGISGKF---EDISFINTFKLTCVAVDLSL 214

Query: 796  CLETLSSLSNVDFEFTSRLRIYYTRASAILMGLQ-NVVRMVLRGCFIELLSRNEGSSARL 620
             L + SS + +DF FT    +Y    S      + +VV   L    + L         +L
Sbjct: 215  YLNSESSSNLLDF-FTQLHHVYELYVSGYFSKSKFSVVHQYLAAGVVPL---------KL 264

Query: 619  PTSCFSLEYLQLDVKPSK-EQVQVVILLLRNYPNLKHLRI 503
            PT C +L  L L +  ++ +++   + + R+ PNLK L+I
Sbjct: 265  PTPCINLMSLWLSINFNELKEISTALSVFRSSPNLKELKI 304


>ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478059|gb|AES59262.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 528

 Score =  122 bits (307), Expect = 2e-25
 Identities = 114/415 (27%), Positives = 197/415 (47%), Gaps = 14/415 (3%)
 Frame = -1

Query: 1501 DMISNLPEPILSRIVSLLPLEDAIKTTSLSKKWLNVCTSLTNIEFD--------QVKFDR 1346
            D IS LP  ++ +I+S LP+ DA++T+ LS+ W     +L N+ FD            D 
Sbjct: 15   DRISWLPGHVIDQIMSYLPIRDAVRTSVLSRNWRKKWYTLPNLVFDTKLVPVPAATSGDP 74

Query: 1345 WARGKRQFKDFVNQTLVLHGG-LDIDKFSIYIDI-GAISM-SNVNSWIYFAVNHNVKEVD 1175
             A    +F   V+  L++H G +++ KFS   D+ G  S+ +N++ WI   +  ++KE+ 
Sbjct: 75   LAIIDNKFLQIVDHVLLVHSGPINMFKFSNVDDLMGEDSLVTNIDRWILHLIGRSIKELV 134

Query: 1174 IAGYYGYFEKLPCCLFTCGTLRVLTLEYVNLQLPTMV-GLPKLKSLKIKFVRFFDENSTA 998
            +  +   + KLP CLF+C +L  L L    L+ PTM  G   LKSL +  V    +++  
Sbjct: 135  LEVWIDDYYKLPWCLFSCQSLHSLKLNGCLLKPPTMFEGFRNLKSLDLCLVNIV-QDAFE 193

Query: 997  QLFSSCPLLEELVISNCCFKDMNVSCIVEISSPSLKSVTVLSFYLPPVKISTSNLCNIRY 818
               S CPLLE+L +     ++      + I +P+LK   ++  +      +T  L  I  
Sbjct: 194  NFISRCPLLEKLRL-----REFYGLTQINIHAPNLKFFEIVGEFEVVTFGNTFQLTTIVI 248

Query: 817  YGNPPEICLETLSSLSNVDFEFTSRLRIYYTRASAILMGLQNVVRMVLRGCFIELLSRNE 638
            Y      CLE L+S SN      SR     +          ++  + + G F++ L+   
Sbjct: 249  YS-----CLE-LTSNSN-----QSRSPGCSSNLLKFFDHRPHIQSLEIDGFFLKYLAAGV 297

Query: 637  GSSARLPTSCFSLEYLQLDVK-PSKEQVQVVILLLRNYPNLKHLRISVKEPTRRLNLHEL 461
                +LPT C +L +L L +   + E++   + + R+ PNL+ L+IS       L  H  
Sbjct: 298  -LPVKLPTPCINLSFLSLTINFDNMEEISAALCVFRSSPNLQKLKISA------LRAHVA 350

Query: 460  WXXXXXXXXXXXXGSSMDILD-HLKTVDVESFGGSKIELDLVRYLLKNANILEKL 299
                          SS  ++   ++ V ++   G++ EL+L+R+LL  + +LEK+
Sbjct: 351  TVPLTPATYCWEDISSRLVMPFRVRHVTIDGISGTQSELNLIRFLLLYSLVLEKM 405


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  119 bits (299), Expect = 2e-24
 Identities = 104/345 (30%), Positives = 171/345 (49%), Gaps = 26/345 (7%)
 Frame = -1

Query: 1528 GNCSAQQTKDM-------ISNLPEPILSRIVSLLPLEDAIKTTSLSKKWLNVCTSLTNIE 1370
            G   A Q +DM       I++LP+ +L  I+S L  +DA++T+ LS+KW ++  SL+N+E
Sbjct: 22   GGGVADQKQDMDDSGGKSINDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLE 81

Query: 1369 FDQVKFDRWARGKRQ-FKDFVNQTLVLHGGLDIDKFSIYIDIGAISMSNVNSWIYFAVNH 1193
            F Q  F    + KR+ F + V + L+L    +I+KF+  +  G    +   +W+  AVN 
Sbjct: 82   FHQCYF----KAKRKIFMNSVERVLLLRDSSNIEKFT--LSCGIDDATRTRTWVSAAVNR 135

Query: 1192 NVKEVDIAGYYGYFEK---LPCCLFTCGTLRVLTL-EYVNLQLPTMVGLPKLKSLKIKFV 1025
            NVKE+ +  Y G   +    P CLFTC TL  L +  +  L+L + + LP LK L ++ V
Sbjct: 136  NVKELCVNFYEGGESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHV 195

Query: 1024 RFFDENSTAQLFSSCPLLEELVISNCCFKDMNVSCIVEISSPSLKSVTVLSFYLPPVKIS 845
             F DE+ST Q+  +   LE+L IS   +K++     + IS+P L+S+ +   +   ++  
Sbjct: 196  VFPDEDSTQQIL-NLRTLEKLKISYYDWKNLKA---ITISAPKLRSLDICEMHRNDLR-- 249

Query: 844  TSNLCNIRYYGNP-----------PEICLETLSSLSNVDFEF---TSRLRIYYTRASAIL 707
             S+ C++  +G              + CL   SSL    F       R R    RA   +
Sbjct: 250  GSDACHVMIFGTALTFFSFSGGFWDDYCLFKSSSLVEAYFHVYGCYERSREIAHRAYKHI 309

Query: 706  MGLQNVVRMVLRGCFIELLSRNEGSSARLPTSCFSLEYLQLDVKP 572
            +GL  V  + L    +++       S  LPT+C   +++   V P
Sbjct: 310  VGLSTVKHLTLTPDVLKI-----ELSEELPTNCAKDDWILEPVPP 349