BLASTX nr result
ID: Coptis24_contig00011673
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011673
(1929 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinu... 787 0.0
emb|CBI37733.3| unnamed protein product [Vitis vinifera] 774 0.0
ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vin... 774 0.0
ref|XP_002313575.1| glutamate-gated kainate-type ion channel rec... 773 0.0
emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera] 769 0.0
>ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis]
gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant,
putative [Ricinus communis]
Length = 924
Score = 787 bits (2032), Expect = 0.0
Identities = 386/566 (68%), Positives = 468/566 (82%), Gaps = 6/566 (1%)
Frame = +3
Query: 60 MTVFD*GKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGFRQIGYWSNYSG 239
+++FD G +LL +IL TNMTGLTGPIRFNPDRSL+HP+ +++NVI +G++QIGYWSNYSG
Sbjct: 355 LSIFDGGSKLLKNILLTNMTGLTGPIRFNPDRSLLHPSYEIVNVIETGYQQIGYWSNYSG 414
Query: 240 LSVVPPETLYKKPPNRSSSNQQLYSVIWPGETTTKPRGWVFPDNGRQLRVGVPNRVSYQE 419
LSVVPPETLY KP NRSSS+Q+L+SV+WPG + +PRGWVFPDNGR+LR+G+PNRVSY++
Sbjct: 415 LSVVPPETLYGKPANRSSSSQRLFSVLWPGGVSARPRGWVFPDNGRRLRIGIPNRVSYRD 474
Query: 420 FVSKVKGTDVVKGYCIDVFLAAINLLPYAVPHEFIPFGDGHKNPSYTELVSLITSNVFDA 599
FVSK+ GTD V+GYCIDVFLAAI LLPYAVP++FIPFGDGHKNPSY+ELV+ IT VFD
Sbjct: 475 FVSKINGTDEVQGYCIDVFLAAIKLLPYAVPYKFIPFGDGHKNPSYSELVNRITVGVFDG 534
Query: 600 AIGDIAIVTNRTKIVDFTQPYIESGLTIVAPVRKRNSSAWAFLRPFTWTLWAVTALFFLL 779
IGDIAIVTNRT++VDFTQPYIESGL +VAPV+K NS+ WAFLRPFT +WAVTA+FFLL
Sbjct: 535 VIGDIAIVTNRTRVVDFTQPYIESGLVVVAPVKKLNSNEWAFLRPFTPWMWAVTAIFFLL 594
Query: 780 VGAVVWILEHRMNDEFRGPPKQQIVTILWFSFSTLFFAHRENTVSSLGRXXXXXXXXXXX 959
VGAVVWILEHR+NDEFRGPP++Q+VTILWFSFST+FFAHRENTVS+LGR
Sbjct: 595 VGAVVWILEHRINDEFRGPPRKQVVTILWFSFSTMFFAHRENTVSTLGRMVLIIWLFVVL 654
Query: 960 XXNSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLI 1139
NSSYTASLTSILTVQ+LSSPIKG+++L+TS+ IG+QVGSFAENYL EELNIAK+RL+
Sbjct: 655 IINSSYTASLTSILTVQQLSSPIKGIDTLVTSSEHIGYQVGSFAENYLNEELNIAKTRLV 714
Query: 1140 ALGSPEEYATALERGRVSAIVDELPYVEVFLSKHCKFSAVGQVFTKSGWGFAFPRDSPLA 1319
ALGSPEEYA+AL G V+A+VDE PYV++FLS HC+FS GQ FTKSGWGFAFPRDSPLA
Sbjct: 715 ALGSPEEYASALANGTVAAVVDERPYVDLFLSDHCQFSIRGQEFTKSGWGFAFPRDSPLA 774
Query: 1320 VDLSTAILTLSENGDLQRIHDKWLTRKACTKD-TEIASDRLHLRSFWGLFLICGVACFLA 1496
+D+STAILTLSE GDLQ+IHDKWL RK C+ ++ S++L L+SFWGLFLICG+ACFLA
Sbjct: 775 MDISTAILTLSETGDLQKIHDKWLARKVCSSQISDSGSEQLQLQSFWGLFLICGIACFLA 834
Query: 1497 LLVYFISTVKQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDK-EETVSKNKRK----SI 1661
L +YF ++QF R +QTFLSFVD+K +E+ SK+KRK SI
Sbjct: 835 LFIYFCMMLRQFSR-HAPEDSDPSIRSSRSRRIQTFLSFVDEKADESKSKSKRKRGDESI 893
Query: 1662 DNVQDDKSRSGSKRRQMETSPD*HAN 1739
++D S GS R Q + S + H++
Sbjct: 894 GYGKEDDSVDGSDRIQRDISQERHSS 919
>emb|CBI37733.3| unnamed protein product [Vitis vinifera]
Length = 1147
Score = 774 bits (1998), Expect = 0.0
Identities = 385/561 (68%), Positives = 453/561 (80%), Gaps = 6/561 (1%)
Frame = +3
Query: 60 MTVFD*GKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGFRQIGYWSNYSG 239
+++FD G+QLL +ILQ N TGLTGP+RF PDRS +HPA +VINV+G+GFRQ+GYWS+YSG
Sbjct: 585 LSIFDGGQQLLKNILQINRTGLTGPLRFGPDRSPVHPAYEVINVVGTGFRQLGYWSDYSG 644
Query: 240 LSVVPPETLYKKPPNRSSSNQQLYSVIWPGETTTKPRGWVFPDNGRQLRVGVPNRVSYQE 419
LSV P+TLY KPPNRS SNQQLY V+WPGE T KPRGWVFP+NGR LR+GVPNRVSY++
Sbjct: 645 LSVASPDTLYAKPPNRSRSNQQLYDVLWPGEITKKPRGWVFPNNGRHLRIGVPNRVSYRD 704
Query: 420 FVSKVKGTDVVKGYCIDVFLAAINLLPYAVPHEFIPFGDGHKNPSYTELVSLITSNVFDA 599
FVSK K TD + GYCIDVF AAI LLPYAVP++F+ FGDG +NP+Y +LV + SN FDA
Sbjct: 705 FVSKGKDTDDLHGYCIDVFTAAIALLPYAVPYKFVLFGDGLENPNYNQLVYKVASNDFDA 764
Query: 600 AIGDIAIVTNRTKIVDFTQPYIESGLTIVAPVRKRNSSAWAFLRPFTWTLWAVTALFFLL 779
A+GDIAIVTNRTK VDFTQPYIESGL +VAPV+K NSSAWAFL+PF+ +W +TA FFL+
Sbjct: 765 AVGDIAIVTNRTKAVDFTQPYIESGLVVVAPVKKLNSSAWAFLKPFSPLMWGITASFFLI 824
Query: 780 VGAVVWILEHRMNDEFRGPPKQQIVTILWFSFSTLFFAHRENTVSSLGRXXXXXXXXXXX 959
VGAVVWILEHR+ND+FRGPPK+QIVT+LWFSFSTLFF+HRENTVSSLGR
Sbjct: 825 VGAVVWILEHRINDDFRGPPKKQIVTMLWFSFSTLFFSHRENTVSSLGRMVLIIWLFVVL 884
Query: 960 XXNSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLI 1139
NSSYTASLTSILTVQ+LSS IKG+E+LITS + IGFQVGSFAENYL +EL+I KSRLI
Sbjct: 885 IINSSYTASLTSILTVQQLSSSIKGIETLITSNDRIGFQVGSFAENYLSDELDIPKSRLI 944
Query: 1140 ALGSPEEYATALERGRVSAIVDELPYVEVFLSKHCKFSAVGQVFTKSGWGFAFPRDSPLA 1319
ALGSPEEYATALE G V+A+VDE PY+EVFL+ HCKFS VG FT+SGWGFAFPRDS L
Sbjct: 945 ALGSPEEYATALENGTVAAVVDERPYIEVFLASHCKFSIVGPQFTRSGWGFAFPRDSSLT 1004
Query: 1320 VDLSTAILTLSENGDLQRIHDKWLTRKACTKDTEIASDRLHLRSFWGLFLICGVACFLAL 1499
VDLSTAILTLSENGDLQRIHDKWL K C+ ++++ SD+L +SFWGLFLICG+ACFLAL
Sbjct: 1005 VDLSTAILTLSENGDLQRIHDKWLKNKVCSDNSQLGSDQLQFQSFWGLFLICGIACFLAL 1064
Query: 1500 LVYFISTVKQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDKEE-TVSKNKRKSID---- 1664
LVYF V+QF + LQTFLSFVD+K E + +K+KRK D
Sbjct: 1065 LVYFCMMVRQFSK-QFSEASPSSHGSSLSARLQTFLSFVDNKAEVSKAKSKRKRGDMSLD 1123
Query: 1665 -NVQDDKSRSGSKRRQMETSP 1724
N ++DKSR+GS R + P
Sbjct: 1124 SNGREDKSRNGSTRTKQTDLP 1144
>ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vinifera]
Length = 917
Score = 774 bits (1998), Expect = 0.0
Identities = 385/561 (68%), Positives = 453/561 (80%), Gaps = 6/561 (1%)
Frame = +3
Query: 60 MTVFD*GKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGFRQIGYWSNYSG 239
+++FD G+QLL +ILQ N TGLTGP+RF PDRS +HPA +VINV+G+GFRQ+GYWS+YSG
Sbjct: 355 LSIFDGGQQLLKNILQINRTGLTGPLRFGPDRSPVHPAYEVINVVGTGFRQLGYWSDYSG 414
Query: 240 LSVVPPETLYKKPPNRSSSNQQLYSVIWPGETTTKPRGWVFPDNGRQLRVGVPNRVSYQE 419
LSV P+TLY KPPNRS SNQQLY V+WPGE T KPRGWVFP+NGR LR+GVPNRVSY++
Sbjct: 415 LSVASPDTLYAKPPNRSRSNQQLYDVLWPGEITKKPRGWVFPNNGRHLRIGVPNRVSYRD 474
Query: 420 FVSKVKGTDVVKGYCIDVFLAAINLLPYAVPHEFIPFGDGHKNPSYTELVSLITSNVFDA 599
FVSK K TD + GYCIDVF AAI LLPYAVP++F+ FGDG +NP+Y +LV + SN FDA
Sbjct: 475 FVSKGKDTDDLHGYCIDVFTAAIALLPYAVPYKFVLFGDGLENPNYNQLVYKVASNDFDA 534
Query: 600 AIGDIAIVTNRTKIVDFTQPYIESGLTIVAPVRKRNSSAWAFLRPFTWTLWAVTALFFLL 779
A+GDIAIVTNRTK VDFTQPYIESGL +VAPV+K NSSAWAFL+PF+ +W +TA FFL+
Sbjct: 535 AVGDIAIVTNRTKAVDFTQPYIESGLVVVAPVKKLNSSAWAFLKPFSPLMWGITASFFLI 594
Query: 780 VGAVVWILEHRMNDEFRGPPKQQIVTILWFSFSTLFFAHRENTVSSLGRXXXXXXXXXXX 959
VGAVVWILEHR+ND+FRGPPK+QIVT+LWFSFSTLFF+HRENTVSSLGR
Sbjct: 595 VGAVVWILEHRINDDFRGPPKKQIVTMLWFSFSTLFFSHRENTVSSLGRMVLIIWLFVVL 654
Query: 960 XXNSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLI 1139
NSSYTASLTSILTVQ+LSS IKG+E+LITS + IGFQVGSFAENYL +EL+I KSRLI
Sbjct: 655 IINSSYTASLTSILTVQQLSSSIKGIETLITSNDRIGFQVGSFAENYLSDELDIPKSRLI 714
Query: 1140 ALGSPEEYATALERGRVSAIVDELPYVEVFLSKHCKFSAVGQVFTKSGWGFAFPRDSPLA 1319
ALGSPEEYATALE G V+A+VDE PY+EVFL+ HCKFS VG FT+SGWGFAFPRDS L
Sbjct: 715 ALGSPEEYATALENGTVAAVVDERPYIEVFLASHCKFSIVGPQFTRSGWGFAFPRDSSLT 774
Query: 1320 VDLSTAILTLSENGDLQRIHDKWLTRKACTKDTEIASDRLHLRSFWGLFLICGVACFLAL 1499
VDLSTAILTLSENGDLQRIHDKWL K C+ ++++ SD+L +SFWGLFLICG+ACFLAL
Sbjct: 775 VDLSTAILTLSENGDLQRIHDKWLKNKVCSDNSQLGSDQLQFQSFWGLFLICGIACFLAL 834
Query: 1500 LVYFISTVKQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDKEE-TVSKNKRKSID---- 1664
LVYF V+QF + LQTFLSFVD+K E + +K+KRK D
Sbjct: 835 LVYFCMMVRQFSK-QFSEASPSSHGSSLSARLQTFLSFVDNKAEVSKAKSKRKRGDMSLD 893
Query: 1665 -NVQDDKSRSGSKRRQMETSP 1724
N ++DKSR+GS R + P
Sbjct: 894 SNGREDKSRNGSTRTKQTDLP 914
>ref|XP_002313575.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa] gi|222849983|gb|EEE87530.1|
glutamate-gated kainate-type ion channel receptor subunit
GluR5 [Populus trichocarpa]
Length = 900
Score = 773 bits (1997), Expect = 0.0
Identities = 371/530 (70%), Positives = 446/530 (84%), Gaps = 1/530 (0%)
Frame = +3
Query: 60 MTVFD*GKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGFRQIGYWSNYSG 239
+++FD G QLL +ILQT+MTGLTGP RFNPDRS++HP+ D+INV+ +G++Q+GYWSNYSG
Sbjct: 356 LSIFDGGSQLLKNILQTSMTGLTGPFRFNPDRSILHPSYDIINVLETGYQQVGYWSNYSG 415
Query: 240 LSVVPPETLYKKPPNRSSSNQQLYSVIWPGETTTKPRGWVFPDNGRQLRVGVPNRVSYQE 419
LSVVPPETLY K NRSSS+Q L SV+WPG TT +PRGWVFP+NG++L++G+PNRVSY++
Sbjct: 416 LSVVPPETLYGKAANRSSSSQHLQSVVWPGGTTARPRGWVFPNNGKELQIGIPNRVSYRD 475
Query: 420 FVSKVKGTDVVKGYCIDVFLAAINLLPYAVPHEFIPFGDGHKNPSYTELVSLITSNVFDA 599
FVSKV GTD+V+GYCIDVFLAAI LLPYAVPH+FIPFGDGHKNP+Y +LV IT+ VFDA
Sbjct: 476 FVSKVNGTDMVQGYCIDVFLAAIKLLPYAVPHKFIPFGDGHKNPTYYDLVYKITTRVFDA 535
Query: 600 AIGDIAIVTNRTKIVDFTQPYIESGLTIVAPVRKRNSSAWAFLRPFTWTLWAVTALFFLL 779
IGD+AIVTNRTKIVDFTQPYIESGL +VAPV+KRNS+AWAFLRPF+ +WAVTA+FFL+
Sbjct: 536 VIGDVAIVTNRTKIVDFTQPYIESGLVVVAPVKKRNSNAWAFLRPFSPLMWAVTAMFFLI 595
Query: 780 VGAVVWILEHRMNDEFRGPPKQQIVTILWFSFSTLFFAHRENTVSSLGRXXXXXXXXXXX 959
VGAVVWILEHR+NDEFRGPP++Q+VTILWFSFSTLFF+HRENTVS+LGR
Sbjct: 596 VGAVVWILEHRINDEFRGPPRKQLVTILWFSFSTLFFSHRENTVSTLGRLVLIIWLFVVL 655
Query: 960 XXNSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLI 1139
NSSYTASLTSILTVQ+LSS IKG++SLITS IGFQVGSFAENYL EEL+IAK+RL+
Sbjct: 656 IINSSYTASLTSILTVQQLSSTIKGIDSLITSNAQIGFQVGSFAENYLNEELSIAKTRLV 715
Query: 1140 ALGSPEEYATALERGRVSAIVDELPYVEVFLSKHCKFSAVGQVFTKSGWGFAFPRDSPLA 1319
LGSPEEYA AL+ G V+A+VDE PYV++FLS+HC+FS +GQ FT+SGWGFAFPRDSPLA
Sbjct: 716 PLGSPEEYADALKNGTVAAVVDERPYVDLFLSEHCEFSIIGQEFTRSGWGFAFPRDSPLA 775
Query: 1320 VDLSTAILTLSENGDLQRIHDKWLTRKAC-TKDTEIASDRLHLRSFWGLFLICGVACFLA 1496
+D+STAIL LSENG+LQ IH+KWL RK C ++D ++D+L L+SFWGLFLICG+AC LA
Sbjct: 776 IDMSTAILQLSENGELQNIHNKWLQRKLCSSQDIGSSADQLQLQSFWGLFLICGIACLLA 835
Query: 1497 LLVYFISTVKQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDKEETVSKN 1646
LL+YF +T +QF R LQTFLSF DDK E K+
Sbjct: 836 LLIYFCTTFRQFSRHFPEESDSSVQSRSRSKRLQTFLSFADDKVEQWKKS 885
>emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]
Length = 959
Score = 769 bits (1985), Expect = 0.0
Identities = 383/561 (68%), Positives = 451/561 (80%), Gaps = 6/561 (1%)
Frame = +3
Query: 60 MTVFD*GKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGFRQIGYWSNYSG 239
+++FD G+QLL +ILQ N TGLTGP+RF PDRS +HPA +VINV+G+GFRQ+GYWS+YSG
Sbjct: 397 LSIFDGGQQLLKNILQINRTGLTGPLRFGPDRSPVHPAYEVINVVGTGFRQLGYWSDYSG 456
Query: 240 LSVVPPETLYKKPPNRSSSNQQLYSVIWPGETTTKPRGWVFPDNGRQLRVGVPNRVSYQE 419
LSV P+TLY KPPNRS SNQQLY V+WPGE T KPRGWVFP+NGR LR+GVPNRVSY++
Sbjct: 457 LSVASPDTLYAKPPNRSRSNQQLYDVLWPGEITKKPRGWVFPNNGRHLRIGVPNRVSYRD 516
Query: 420 FVSKVKGTDVVKGYCIDVFLAAINLLPYAVPHEFIPFGDGHKNPSYTELVSLITSNVFDA 599
FVSK K TD + GYCIDVF AAI LLPYAVP++F+ FGDG +NP+Y +LV + SN FDA
Sbjct: 517 FVSKGKDTDDLHGYCIDVFTAAIALLPYAVPYKFVLFGDGLENPNYNQLVYKVASNDFDA 576
Query: 600 AIGDIAIVTNRTKIVDFTQPYIESGLTIVAPVRKRNSSAWAFLRPFTWTLWAVTALFFLL 779
A+GDIAIVTNRTK VDFTQPYIESGL +VAPV+K NSSAWAFL+PF+ +W +TA FFL+
Sbjct: 577 AVGDIAIVTNRTKAVDFTQPYIESGLVVVAPVKKLNSSAWAFLKPFSPLMWGITASFFLI 636
Query: 780 VGAVVWILEHRMNDEFRGPPKQQIVTILWFSFSTLFFAHRENTVSSLGRXXXXXXXXXXX 959
VGAVVWILEHR+ND+FRGPPK+QIVT+LWFSFSTLFF+HRENTVSSLGR
Sbjct: 637 VGAVVWILEHRINDDFRGPPKKQIVTMLWFSFSTLFFSHRENTVSSLGRMVLIIWLFVVL 696
Query: 960 XXNSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLI 1139
NSSYTASLTSILTVQ+LSS IKG+E+LITS + IGFQVGSFAENYL +EL+I KSRLI
Sbjct: 697 IINSSYTASLTSILTVQQLSSSIKGIETLITSNDRIGFQVGSFAENYLSDELDIPKSRLI 756
Query: 1140 ALGSPEEYATALERGRVSAIVDELPYVEVFLSKHCKFSAVGQVFTKSGWGFAFPRDSPLA 1319
LGSPEEYATALE G V+A+VDE PY+EVFL+ HCKFS VG FT+SGWGFAF RDS L
Sbjct: 757 PLGSPEEYATALENGTVAAVVDERPYIEVFLASHCKFSIVGPQFTRSGWGFAFXRDSSLT 816
Query: 1320 VDLSTAILTLSENGDLQRIHDKWLTRKACTKDTEIASDRLHLRSFWGLFLICGVACFLAL 1499
VDLSTAILTLSENGDLQRIHDKWL K C+ ++++ SD+L +SFWGLFLICG+ACFLAL
Sbjct: 817 VDLSTAILTLSENGDLQRIHDKWLKNKVCSDNSQLGSDQLQFQSFWGLFLICGIACFLAL 876
Query: 1500 LVYFISTVKQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDKEE-TVSKNKRKSID---- 1664
LVYF V+QF + LQTFLSFVD+K E + +K+KRK D
Sbjct: 877 LVYFCMMVRQFSK-QFSEASPSSHGSSRSARLQTFLSFVDNKAEVSKAKSKRKRGDMSLD 935
Query: 1665 -NVQDDKSRSGSKRRQMETSP 1724
N ++DKSR+GS R + P
Sbjct: 936 SNGREDKSRNGSTRTKQTDLP 956