BLASTX nr result

ID: Coptis24_contig00011673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011673
         (1929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinu...   787   0.0  
emb|CBI37733.3| unnamed protein product [Vitis vinifera]              774   0.0  
ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vin...   774   0.0  
ref|XP_002313575.1| glutamate-gated kainate-type ion channel rec...   773   0.0  
emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]   769   0.0  

>ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 924

 Score =  787 bits (2032), Expect = 0.0
 Identities = 386/566 (68%), Positives = 468/566 (82%), Gaps = 6/566 (1%)
 Frame = +3

Query: 60   MTVFD*GKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGFRQIGYWSNYSG 239
            +++FD G +LL +IL TNMTGLTGPIRFNPDRSL+HP+ +++NVI +G++QIGYWSNYSG
Sbjct: 355  LSIFDGGSKLLKNILLTNMTGLTGPIRFNPDRSLLHPSYEIVNVIETGYQQIGYWSNYSG 414

Query: 240  LSVVPPETLYKKPPNRSSSNQQLYSVIWPGETTTKPRGWVFPDNGRQLRVGVPNRVSYQE 419
            LSVVPPETLY KP NRSSS+Q+L+SV+WPG  + +PRGWVFPDNGR+LR+G+PNRVSY++
Sbjct: 415  LSVVPPETLYGKPANRSSSSQRLFSVLWPGGVSARPRGWVFPDNGRRLRIGIPNRVSYRD 474

Query: 420  FVSKVKGTDVVKGYCIDVFLAAINLLPYAVPHEFIPFGDGHKNPSYTELVSLITSNVFDA 599
            FVSK+ GTD V+GYCIDVFLAAI LLPYAVP++FIPFGDGHKNPSY+ELV+ IT  VFD 
Sbjct: 475  FVSKINGTDEVQGYCIDVFLAAIKLLPYAVPYKFIPFGDGHKNPSYSELVNRITVGVFDG 534

Query: 600  AIGDIAIVTNRTKIVDFTQPYIESGLTIVAPVRKRNSSAWAFLRPFTWTLWAVTALFFLL 779
             IGDIAIVTNRT++VDFTQPYIESGL +VAPV+K NS+ WAFLRPFT  +WAVTA+FFLL
Sbjct: 535  VIGDIAIVTNRTRVVDFTQPYIESGLVVVAPVKKLNSNEWAFLRPFTPWMWAVTAIFFLL 594

Query: 780  VGAVVWILEHRMNDEFRGPPKQQIVTILWFSFSTLFFAHRENTVSSLGRXXXXXXXXXXX 959
            VGAVVWILEHR+NDEFRGPP++Q+VTILWFSFST+FFAHRENTVS+LGR           
Sbjct: 595  VGAVVWILEHRINDEFRGPPRKQVVTILWFSFSTMFFAHRENTVSTLGRMVLIIWLFVVL 654

Query: 960  XXNSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLI 1139
              NSSYTASLTSILTVQ+LSSPIKG+++L+TS+  IG+QVGSFAENYL EELNIAK+RL+
Sbjct: 655  IINSSYTASLTSILTVQQLSSPIKGIDTLVTSSEHIGYQVGSFAENYLNEELNIAKTRLV 714

Query: 1140 ALGSPEEYATALERGRVSAIVDELPYVEVFLSKHCKFSAVGQVFTKSGWGFAFPRDSPLA 1319
            ALGSPEEYA+AL  G V+A+VDE PYV++FLS HC+FS  GQ FTKSGWGFAFPRDSPLA
Sbjct: 715  ALGSPEEYASALANGTVAAVVDERPYVDLFLSDHCQFSIRGQEFTKSGWGFAFPRDSPLA 774

Query: 1320 VDLSTAILTLSENGDLQRIHDKWLTRKACTKD-TEIASDRLHLRSFWGLFLICGVACFLA 1496
            +D+STAILTLSE GDLQ+IHDKWL RK C+   ++  S++L L+SFWGLFLICG+ACFLA
Sbjct: 775  MDISTAILTLSETGDLQKIHDKWLARKVCSSQISDSGSEQLQLQSFWGLFLICGIACFLA 834

Query: 1497 LLVYFISTVKQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDK-EETVSKNKRK----SI 1661
            L +YF   ++QF R                  +QTFLSFVD+K +E+ SK+KRK    SI
Sbjct: 835  LFIYFCMMLRQFSR-HAPEDSDPSIRSSRSRRIQTFLSFVDEKADESKSKSKRKRGDESI 893

Query: 1662 DNVQDDKSRSGSKRRQMETSPD*HAN 1739
               ++D S  GS R Q + S + H++
Sbjct: 894  GYGKEDDSVDGSDRIQRDISQERHSS 919


>emb|CBI37733.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score =  774 bits (1998), Expect = 0.0
 Identities = 385/561 (68%), Positives = 453/561 (80%), Gaps = 6/561 (1%)
 Frame = +3

Query: 60   MTVFD*GKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGFRQIGYWSNYSG 239
            +++FD G+QLL +ILQ N TGLTGP+RF PDRS +HPA +VINV+G+GFRQ+GYWS+YSG
Sbjct: 585  LSIFDGGQQLLKNILQINRTGLTGPLRFGPDRSPVHPAYEVINVVGTGFRQLGYWSDYSG 644

Query: 240  LSVVPPETLYKKPPNRSSSNQQLYSVIWPGETTTKPRGWVFPDNGRQLRVGVPNRVSYQE 419
            LSV  P+TLY KPPNRS SNQQLY V+WPGE T KPRGWVFP+NGR LR+GVPNRVSY++
Sbjct: 645  LSVASPDTLYAKPPNRSRSNQQLYDVLWPGEITKKPRGWVFPNNGRHLRIGVPNRVSYRD 704

Query: 420  FVSKVKGTDVVKGYCIDVFLAAINLLPYAVPHEFIPFGDGHKNPSYTELVSLITSNVFDA 599
            FVSK K TD + GYCIDVF AAI LLPYAVP++F+ FGDG +NP+Y +LV  + SN FDA
Sbjct: 705  FVSKGKDTDDLHGYCIDVFTAAIALLPYAVPYKFVLFGDGLENPNYNQLVYKVASNDFDA 764

Query: 600  AIGDIAIVTNRTKIVDFTQPYIESGLTIVAPVRKRNSSAWAFLRPFTWTLWAVTALFFLL 779
            A+GDIAIVTNRTK VDFTQPYIESGL +VAPV+K NSSAWAFL+PF+  +W +TA FFL+
Sbjct: 765  AVGDIAIVTNRTKAVDFTQPYIESGLVVVAPVKKLNSSAWAFLKPFSPLMWGITASFFLI 824

Query: 780  VGAVVWILEHRMNDEFRGPPKQQIVTILWFSFSTLFFAHRENTVSSLGRXXXXXXXXXXX 959
            VGAVVWILEHR+ND+FRGPPK+QIVT+LWFSFSTLFF+HRENTVSSLGR           
Sbjct: 825  VGAVVWILEHRINDDFRGPPKKQIVTMLWFSFSTLFFSHRENTVSSLGRMVLIIWLFVVL 884

Query: 960  XXNSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLI 1139
              NSSYTASLTSILTVQ+LSS IKG+E+LITS + IGFQVGSFAENYL +EL+I KSRLI
Sbjct: 885  IINSSYTASLTSILTVQQLSSSIKGIETLITSNDRIGFQVGSFAENYLSDELDIPKSRLI 944

Query: 1140 ALGSPEEYATALERGRVSAIVDELPYVEVFLSKHCKFSAVGQVFTKSGWGFAFPRDSPLA 1319
            ALGSPEEYATALE G V+A+VDE PY+EVFL+ HCKFS VG  FT+SGWGFAFPRDS L 
Sbjct: 945  ALGSPEEYATALENGTVAAVVDERPYIEVFLASHCKFSIVGPQFTRSGWGFAFPRDSSLT 1004

Query: 1320 VDLSTAILTLSENGDLQRIHDKWLTRKACTKDTEIASDRLHLRSFWGLFLICGVACFLAL 1499
            VDLSTAILTLSENGDLQRIHDKWL  K C+ ++++ SD+L  +SFWGLFLICG+ACFLAL
Sbjct: 1005 VDLSTAILTLSENGDLQRIHDKWLKNKVCSDNSQLGSDQLQFQSFWGLFLICGIACFLAL 1064

Query: 1500 LVYFISTVKQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDKEE-TVSKNKRKSID---- 1664
            LVYF   V+QF +                  LQTFLSFVD+K E + +K+KRK  D    
Sbjct: 1065 LVYFCMMVRQFSK-QFSEASPSSHGSSLSARLQTFLSFVDNKAEVSKAKSKRKRGDMSLD 1123

Query: 1665 -NVQDDKSRSGSKRRQMETSP 1724
             N ++DKSR+GS R +    P
Sbjct: 1124 SNGREDKSRNGSTRTKQTDLP 1144


>ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vinifera]
          Length = 917

 Score =  774 bits (1998), Expect = 0.0
 Identities = 385/561 (68%), Positives = 453/561 (80%), Gaps = 6/561 (1%)
 Frame = +3

Query: 60   MTVFD*GKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGFRQIGYWSNYSG 239
            +++FD G+QLL +ILQ N TGLTGP+RF PDRS +HPA +VINV+G+GFRQ+GYWS+YSG
Sbjct: 355  LSIFDGGQQLLKNILQINRTGLTGPLRFGPDRSPVHPAYEVINVVGTGFRQLGYWSDYSG 414

Query: 240  LSVVPPETLYKKPPNRSSSNQQLYSVIWPGETTTKPRGWVFPDNGRQLRVGVPNRVSYQE 419
            LSV  P+TLY KPPNRS SNQQLY V+WPGE T KPRGWVFP+NGR LR+GVPNRVSY++
Sbjct: 415  LSVASPDTLYAKPPNRSRSNQQLYDVLWPGEITKKPRGWVFPNNGRHLRIGVPNRVSYRD 474

Query: 420  FVSKVKGTDVVKGYCIDVFLAAINLLPYAVPHEFIPFGDGHKNPSYTELVSLITSNVFDA 599
            FVSK K TD + GYCIDVF AAI LLPYAVP++F+ FGDG +NP+Y +LV  + SN FDA
Sbjct: 475  FVSKGKDTDDLHGYCIDVFTAAIALLPYAVPYKFVLFGDGLENPNYNQLVYKVASNDFDA 534

Query: 600  AIGDIAIVTNRTKIVDFTQPYIESGLTIVAPVRKRNSSAWAFLRPFTWTLWAVTALFFLL 779
            A+GDIAIVTNRTK VDFTQPYIESGL +VAPV+K NSSAWAFL+PF+  +W +TA FFL+
Sbjct: 535  AVGDIAIVTNRTKAVDFTQPYIESGLVVVAPVKKLNSSAWAFLKPFSPLMWGITASFFLI 594

Query: 780  VGAVVWILEHRMNDEFRGPPKQQIVTILWFSFSTLFFAHRENTVSSLGRXXXXXXXXXXX 959
            VGAVVWILEHR+ND+FRGPPK+QIVT+LWFSFSTLFF+HRENTVSSLGR           
Sbjct: 595  VGAVVWILEHRINDDFRGPPKKQIVTMLWFSFSTLFFSHRENTVSSLGRMVLIIWLFVVL 654

Query: 960  XXNSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLI 1139
              NSSYTASLTSILTVQ+LSS IKG+E+LITS + IGFQVGSFAENYL +EL+I KSRLI
Sbjct: 655  IINSSYTASLTSILTVQQLSSSIKGIETLITSNDRIGFQVGSFAENYLSDELDIPKSRLI 714

Query: 1140 ALGSPEEYATALERGRVSAIVDELPYVEVFLSKHCKFSAVGQVFTKSGWGFAFPRDSPLA 1319
            ALGSPEEYATALE G V+A+VDE PY+EVFL+ HCKFS VG  FT+SGWGFAFPRDS L 
Sbjct: 715  ALGSPEEYATALENGTVAAVVDERPYIEVFLASHCKFSIVGPQFTRSGWGFAFPRDSSLT 774

Query: 1320 VDLSTAILTLSENGDLQRIHDKWLTRKACTKDTEIASDRLHLRSFWGLFLICGVACFLAL 1499
            VDLSTAILTLSENGDLQRIHDKWL  K C+ ++++ SD+L  +SFWGLFLICG+ACFLAL
Sbjct: 775  VDLSTAILTLSENGDLQRIHDKWLKNKVCSDNSQLGSDQLQFQSFWGLFLICGIACFLAL 834

Query: 1500 LVYFISTVKQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDKEE-TVSKNKRKSID---- 1664
            LVYF   V+QF +                  LQTFLSFVD+K E + +K+KRK  D    
Sbjct: 835  LVYFCMMVRQFSK-QFSEASPSSHGSSLSARLQTFLSFVDNKAEVSKAKSKRKRGDMSLD 893

Query: 1665 -NVQDDKSRSGSKRRQMETSP 1724
             N ++DKSR+GS R +    P
Sbjct: 894  SNGREDKSRNGSTRTKQTDLP 914


>ref|XP_002313575.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222849983|gb|EEE87530.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 900

 Score =  773 bits (1997), Expect = 0.0
 Identities = 371/530 (70%), Positives = 446/530 (84%), Gaps = 1/530 (0%)
 Frame = +3

Query: 60   MTVFD*GKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGFRQIGYWSNYSG 239
            +++FD G QLL +ILQT+MTGLTGP RFNPDRS++HP+ D+INV+ +G++Q+GYWSNYSG
Sbjct: 356  LSIFDGGSQLLKNILQTSMTGLTGPFRFNPDRSILHPSYDIINVLETGYQQVGYWSNYSG 415

Query: 240  LSVVPPETLYKKPPNRSSSNQQLYSVIWPGETTTKPRGWVFPDNGRQLRVGVPNRVSYQE 419
            LSVVPPETLY K  NRSSS+Q L SV+WPG TT +PRGWVFP+NG++L++G+PNRVSY++
Sbjct: 416  LSVVPPETLYGKAANRSSSSQHLQSVVWPGGTTARPRGWVFPNNGKELQIGIPNRVSYRD 475

Query: 420  FVSKVKGTDVVKGYCIDVFLAAINLLPYAVPHEFIPFGDGHKNPSYTELVSLITSNVFDA 599
            FVSKV GTD+V+GYCIDVFLAAI LLPYAVPH+FIPFGDGHKNP+Y +LV  IT+ VFDA
Sbjct: 476  FVSKVNGTDMVQGYCIDVFLAAIKLLPYAVPHKFIPFGDGHKNPTYYDLVYKITTRVFDA 535

Query: 600  AIGDIAIVTNRTKIVDFTQPYIESGLTIVAPVRKRNSSAWAFLRPFTWTLWAVTALFFLL 779
             IGD+AIVTNRTKIVDFTQPYIESGL +VAPV+KRNS+AWAFLRPF+  +WAVTA+FFL+
Sbjct: 536  VIGDVAIVTNRTKIVDFTQPYIESGLVVVAPVKKRNSNAWAFLRPFSPLMWAVTAMFFLI 595

Query: 780  VGAVVWILEHRMNDEFRGPPKQQIVTILWFSFSTLFFAHRENTVSSLGRXXXXXXXXXXX 959
            VGAVVWILEHR+NDEFRGPP++Q+VTILWFSFSTLFF+HRENTVS+LGR           
Sbjct: 596  VGAVVWILEHRINDEFRGPPRKQLVTILWFSFSTLFFSHRENTVSTLGRLVLIIWLFVVL 655

Query: 960  XXNSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLI 1139
              NSSYTASLTSILTVQ+LSS IKG++SLITS   IGFQVGSFAENYL EEL+IAK+RL+
Sbjct: 656  IINSSYTASLTSILTVQQLSSTIKGIDSLITSNAQIGFQVGSFAENYLNEELSIAKTRLV 715

Query: 1140 ALGSPEEYATALERGRVSAIVDELPYVEVFLSKHCKFSAVGQVFTKSGWGFAFPRDSPLA 1319
             LGSPEEYA AL+ G V+A+VDE PYV++FLS+HC+FS +GQ FT+SGWGFAFPRDSPLA
Sbjct: 716  PLGSPEEYADALKNGTVAAVVDERPYVDLFLSEHCEFSIIGQEFTRSGWGFAFPRDSPLA 775

Query: 1320 VDLSTAILTLSENGDLQRIHDKWLTRKAC-TKDTEIASDRLHLRSFWGLFLICGVACFLA 1496
            +D+STAIL LSENG+LQ IH+KWL RK C ++D   ++D+L L+SFWGLFLICG+AC LA
Sbjct: 776  IDMSTAILQLSENGELQNIHNKWLQRKLCSSQDIGSSADQLQLQSFWGLFLICGIACLLA 835

Query: 1497 LLVYFISTVKQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDKEETVSKN 1646
            LL+YF +T +QF R                  LQTFLSF DDK E   K+
Sbjct: 836  LLIYFCTTFRQFSRHFPEESDSSVQSRSRSKRLQTFLSFADDKVEQWKKS 885


>emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]
          Length = 959

 Score =  769 bits (1985), Expect = 0.0
 Identities = 383/561 (68%), Positives = 451/561 (80%), Gaps = 6/561 (1%)
 Frame = +3

Query: 60   MTVFD*GKQLLDDILQTNMTGLTGPIRFNPDRSLIHPALDVINVIGSGFRQIGYWSNYSG 239
            +++FD G+QLL +ILQ N TGLTGP+RF PDRS +HPA +VINV+G+GFRQ+GYWS+YSG
Sbjct: 397  LSIFDGGQQLLKNILQINRTGLTGPLRFGPDRSPVHPAYEVINVVGTGFRQLGYWSDYSG 456

Query: 240  LSVVPPETLYKKPPNRSSSNQQLYSVIWPGETTTKPRGWVFPDNGRQLRVGVPNRVSYQE 419
            LSV  P+TLY KPPNRS SNQQLY V+WPGE T KPRGWVFP+NGR LR+GVPNRVSY++
Sbjct: 457  LSVASPDTLYAKPPNRSRSNQQLYDVLWPGEITKKPRGWVFPNNGRHLRIGVPNRVSYRD 516

Query: 420  FVSKVKGTDVVKGYCIDVFLAAINLLPYAVPHEFIPFGDGHKNPSYTELVSLITSNVFDA 599
            FVSK K TD + GYCIDVF AAI LLPYAVP++F+ FGDG +NP+Y +LV  + SN FDA
Sbjct: 517  FVSKGKDTDDLHGYCIDVFTAAIALLPYAVPYKFVLFGDGLENPNYNQLVYKVASNDFDA 576

Query: 600  AIGDIAIVTNRTKIVDFTQPYIESGLTIVAPVRKRNSSAWAFLRPFTWTLWAVTALFFLL 779
            A+GDIAIVTNRTK VDFTQPYIESGL +VAPV+K NSSAWAFL+PF+  +W +TA FFL+
Sbjct: 577  AVGDIAIVTNRTKAVDFTQPYIESGLVVVAPVKKLNSSAWAFLKPFSPLMWGITASFFLI 636

Query: 780  VGAVVWILEHRMNDEFRGPPKQQIVTILWFSFSTLFFAHRENTVSSLGRXXXXXXXXXXX 959
            VGAVVWILEHR+ND+FRGPPK+QIVT+LWFSFSTLFF+HRENTVSSLGR           
Sbjct: 637  VGAVVWILEHRINDDFRGPPKKQIVTMLWFSFSTLFFSHRENTVSSLGRMVLIIWLFVVL 696

Query: 960  XXNSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLI 1139
              NSSYTASLTSILTVQ+LSS IKG+E+LITS + IGFQVGSFAENYL +EL+I KSRLI
Sbjct: 697  IINSSYTASLTSILTVQQLSSSIKGIETLITSNDRIGFQVGSFAENYLSDELDIPKSRLI 756

Query: 1140 ALGSPEEYATALERGRVSAIVDELPYVEVFLSKHCKFSAVGQVFTKSGWGFAFPRDSPLA 1319
             LGSPEEYATALE G V+A+VDE PY+EVFL+ HCKFS VG  FT+SGWGFAF RDS L 
Sbjct: 757  PLGSPEEYATALENGTVAAVVDERPYIEVFLASHCKFSIVGPQFTRSGWGFAFXRDSSLT 816

Query: 1320 VDLSTAILTLSENGDLQRIHDKWLTRKACTKDTEIASDRLHLRSFWGLFLICGVACFLAL 1499
            VDLSTAILTLSENGDLQRIHDKWL  K C+ ++++ SD+L  +SFWGLFLICG+ACFLAL
Sbjct: 817  VDLSTAILTLSENGDLQRIHDKWLKNKVCSDNSQLGSDQLQFQSFWGLFLICGIACFLAL 876

Query: 1500 LVYFISTVKQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDKEE-TVSKNKRKSID---- 1664
            LVYF   V+QF +                  LQTFLSFVD+K E + +K+KRK  D    
Sbjct: 877  LVYFCMMVRQFSK-QFSEASPSSHGSSRSARLQTFLSFVDNKAEVSKAKSKRKRGDMSLD 935

Query: 1665 -NVQDDKSRSGSKRRQMETSP 1724
             N ++DKSR+GS R +    P
Sbjct: 936  SNGREDKSRNGSTRTKQTDLP 956


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