BLASTX nr result
ID: Coptis24_contig00011663
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011663 (416 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBS... 150 1e-34 ref|XP_002325465.1| predicted protein [Populus trichocarpa] gi|2... 141 5e-32 ref|XP_002512622.1| conserved hypothetical protein [Ricinus comm... 139 3e-31 ref|XP_002329005.1| predicted protein [Populus trichocarpa] gi|2... 136 2e-30 ref|XP_003552437.1| PREDICTED: CBS domain-containing protein CBS... 135 3e-30 >ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBSX6 [Vitis vinifera] gi|297735292|emb|CBI17654.3| unnamed protein product [Vitis vinifera] Length = 427 Score = 150 bits (378), Expect = 1e-34 Identities = 82/110 (74%), Positives = 88/110 (80%), Gaps = 4/110 (3%) Frame = +1 Query: 91 SLPDFSINSL--EDNAGVGGA--RLRKFSSRSIGFFSSLTSPTIGMGRSMYRGCSAPLTC 258 SLP FS+N E+N GGA R RKFSSRSIGFFS+ SP+ G RSMYRG SAPLTC Sbjct: 299 SLPHFSVNLTGGENNMANGGASTRQRKFSSRSIGFFSNPASPSFGASRSMYRGRSAPLTC 358 Query: 259 KVTSSLAAVMAQMLSHRATHVWVTEVEDEESLVGVVGYADILAAVTRHPA 408 KVTSSLAAVMAQMLSHRATHVWVTE E E+ LVGVVGYADILAAV + PA Sbjct: 359 KVTSSLAAVMAQMLSHRATHVWVTEAESEDILVGVVGYADILAAVIKQPA 408 >ref|XP_002325465.1| predicted protein [Populus trichocarpa] gi|222862340|gb|EEE99846.1| predicted protein [Populus trichocarpa] Length = 422 Score = 141 bits (356), Expect = 5e-32 Identities = 76/112 (67%), Positives = 88/112 (78%), Gaps = 4/112 (3%) Frame = +1 Query: 91 SLPDFSINSLEDNA----GVGGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGCSAPLTC 258 SLPDF++NS D+ G G RLRKFSSRSIGF +IG+GRS+YRG SAPLTC Sbjct: 301 SLPDFAVNSAADDDNTAHGAGSTRLRKFSSRSIGFNPG---NSIGIGRSVYRGRSAPLTC 357 Query: 259 KVTSSLAAVMAQMLSHRATHVWVTEVEDEESLVGVVGYADILAAVTRHPATL 414 K+TSSLAAVMAQMLSHRATHVWV E ++ LVGVVGYADILAAVT+ PA++ Sbjct: 358 KITSSLAAVMAQMLSHRATHVWVIEDHSDDILVGVVGYADILAAVTKQPASV 409 >ref|XP_002512622.1| conserved hypothetical protein [Ricinus communis] gi|223548583|gb|EEF50074.1| conserved hypothetical protein [Ricinus communis] Length = 432 Score = 139 bits (349), Expect = 3e-31 Identities = 76/111 (68%), Positives = 89/111 (80%), Gaps = 4/111 (3%) Frame = +1 Query: 91 SLPDFSINS-LEDNA---GVGGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGCSAPLTC 258 SLPDF++NS + DN G G R +KFSS+SIGF S + G+GRSMYRG SAPLTC Sbjct: 307 SLPDFTVNSTVSDNNTANGGGSTRPKKFSSKSIGFNPG--SSSFGIGRSMYRGRSAPLTC 364 Query: 259 KVTSSLAAVMAQMLSHRATHVWVTEVEDEESLVGVVGYADILAAVTRHPAT 411 K+TSSLAAVMAQMLSHRATHVWVTE +++E LVGVVGYADIL AVT+ PA+ Sbjct: 365 KITSSLAAVMAQMLSHRATHVWVTEADNDEVLVGVVGYADILFAVTKPPAS 415 >ref|XP_002329005.1| predicted protein [Populus trichocarpa] gi|222839239|gb|EEE77590.1| predicted protein [Populus trichocarpa] Length = 424 Score = 136 bits (342), Expect = 2e-30 Identities = 76/112 (67%), Positives = 88/112 (78%), Gaps = 4/112 (3%) Frame = +1 Query: 91 SLPDFSINSL---EDNA-GVGGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGCSAPLTC 258 SL DF++NS E A G+G RLR+FSSRSIGF +I MGRSMYRG SAPLTC Sbjct: 301 SLLDFAVNSAVGDESTANGIGSTRLREFSSRSIGFNPG---SSIRMGRSMYRGRSAPLTC 357 Query: 259 KVTSSLAAVMAQMLSHRATHVWVTEVEDEESLVGVVGYADILAAVTRHPATL 414 K+TSSLAAVMAQMLSHRATHVWV E + ++ LVGVVGYADILAAVT+ PA++ Sbjct: 358 KITSSLAAVMAQMLSHRATHVWVIEDDSDDILVGVVGYADILAAVTKQPASV 409 >ref|XP_003552437.1| PREDICTED: CBS domain-containing protein CBSX6-like [Glycine max] Length = 425 Score = 135 bits (341), Expect = 3e-30 Identities = 76/111 (68%), Positives = 87/111 (78%), Gaps = 4/111 (3%) Frame = +1 Query: 91 SLPDFSINSLE---DNAGVGGARL-RKFSSRSIGFFSSLTSPTIGMGRSMYRGCSAPLTC 258 SLP+FS++S D GG+R RKFSSRS+GFFS+ S RSMYRG SAPLTC Sbjct: 299 SLPEFSLDSPSGDIDLVNSGGSRKPRKFSSRSVGFFSNSASHNFS-SRSMYRGRSAPLTC 357 Query: 259 KVTSSLAAVMAQMLSHRATHVWVTEVEDEESLVGVVGYADILAAVTRHPAT 411 K+TSSLAAV+AQMLSHRATHVWVTE E++E LVGVVGYADILAAVT+ P T Sbjct: 358 KITSSLAAVLAQMLSHRATHVWVTEDENDEVLVGVVGYADILAAVTKPPTT 408