BLASTX nr result

ID: Coptis24_contig00011663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011663
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBS...   150   1e-34
ref|XP_002325465.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_002512622.1| conserved hypothetical protein [Ricinus comm...   139   3e-31
ref|XP_002329005.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_003552437.1| PREDICTED: CBS domain-containing protein CBS...   135   3e-30

>ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBSX6 [Vitis vinifera]
           gi|297735292|emb|CBI17654.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score =  150 bits (378), Expect = 1e-34
 Identities = 82/110 (74%), Positives = 88/110 (80%), Gaps = 4/110 (3%)
 Frame = +1

Query: 91  SLPDFSINSL--EDNAGVGGA--RLRKFSSRSIGFFSSLTSPTIGMGRSMYRGCSAPLTC 258
           SLP FS+N    E+N   GGA  R RKFSSRSIGFFS+  SP+ G  RSMYRG SAPLTC
Sbjct: 299 SLPHFSVNLTGGENNMANGGASTRQRKFSSRSIGFFSNPASPSFGASRSMYRGRSAPLTC 358

Query: 259 KVTSSLAAVMAQMLSHRATHVWVTEVEDEESLVGVVGYADILAAVTRHPA 408
           KVTSSLAAVMAQMLSHRATHVWVTE E E+ LVGVVGYADILAAV + PA
Sbjct: 359 KVTSSLAAVMAQMLSHRATHVWVTEAESEDILVGVVGYADILAAVIKQPA 408


>ref|XP_002325465.1| predicted protein [Populus trichocarpa] gi|222862340|gb|EEE99846.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  141 bits (356), Expect = 5e-32
 Identities = 76/112 (67%), Positives = 88/112 (78%), Gaps = 4/112 (3%)
 Frame = +1

Query: 91  SLPDFSINSLEDNA----GVGGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGCSAPLTC 258
           SLPDF++NS  D+     G G  RLRKFSSRSIGF       +IG+GRS+YRG SAPLTC
Sbjct: 301 SLPDFAVNSAADDDNTAHGAGSTRLRKFSSRSIGFNPG---NSIGIGRSVYRGRSAPLTC 357

Query: 259 KVTSSLAAVMAQMLSHRATHVWVTEVEDEESLVGVVGYADILAAVTRHPATL 414
           K+TSSLAAVMAQMLSHRATHVWV E   ++ LVGVVGYADILAAVT+ PA++
Sbjct: 358 KITSSLAAVMAQMLSHRATHVWVIEDHSDDILVGVVGYADILAAVTKQPASV 409


>ref|XP_002512622.1| conserved hypothetical protein [Ricinus communis]
           gi|223548583|gb|EEF50074.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 432

 Score =  139 bits (349), Expect = 3e-31
 Identities = 76/111 (68%), Positives = 89/111 (80%), Gaps = 4/111 (3%)
 Frame = +1

Query: 91  SLPDFSINS-LEDNA---GVGGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGCSAPLTC 258
           SLPDF++NS + DN    G G  R +KFSS+SIGF     S + G+GRSMYRG SAPLTC
Sbjct: 307 SLPDFTVNSTVSDNNTANGGGSTRPKKFSSKSIGFNPG--SSSFGIGRSMYRGRSAPLTC 364

Query: 259 KVTSSLAAVMAQMLSHRATHVWVTEVEDEESLVGVVGYADILAAVTRHPAT 411
           K+TSSLAAVMAQMLSHRATHVWVTE +++E LVGVVGYADIL AVT+ PA+
Sbjct: 365 KITSSLAAVMAQMLSHRATHVWVTEADNDEVLVGVVGYADILFAVTKPPAS 415


>ref|XP_002329005.1| predicted protein [Populus trichocarpa] gi|222839239|gb|EEE77590.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  136 bits (342), Expect = 2e-30
 Identities = 76/112 (67%), Positives = 88/112 (78%), Gaps = 4/112 (3%)
 Frame = +1

Query: 91  SLPDFSINSL---EDNA-GVGGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGCSAPLTC 258
           SL DF++NS    E  A G+G  RLR+FSSRSIGF       +I MGRSMYRG SAPLTC
Sbjct: 301 SLLDFAVNSAVGDESTANGIGSTRLREFSSRSIGFNPG---SSIRMGRSMYRGRSAPLTC 357

Query: 259 KVTSSLAAVMAQMLSHRATHVWVTEVEDEESLVGVVGYADILAAVTRHPATL 414
           K+TSSLAAVMAQMLSHRATHVWV E + ++ LVGVVGYADILAAVT+ PA++
Sbjct: 358 KITSSLAAVMAQMLSHRATHVWVIEDDSDDILVGVVGYADILAAVTKQPASV 409


>ref|XP_003552437.1| PREDICTED: CBS domain-containing protein CBSX6-like [Glycine max]
          Length = 425

 Score =  135 bits (341), Expect = 3e-30
 Identities = 76/111 (68%), Positives = 87/111 (78%), Gaps = 4/111 (3%)
 Frame = +1

Query: 91  SLPDFSINSLE---DNAGVGGARL-RKFSSRSIGFFSSLTSPTIGMGRSMYRGCSAPLTC 258
           SLP+FS++S     D    GG+R  RKFSSRS+GFFS+  S      RSMYRG SAPLTC
Sbjct: 299 SLPEFSLDSPSGDIDLVNSGGSRKPRKFSSRSVGFFSNSASHNFS-SRSMYRGRSAPLTC 357

Query: 259 KVTSSLAAVMAQMLSHRATHVWVTEVEDEESLVGVVGYADILAAVTRHPAT 411
           K+TSSLAAV+AQMLSHRATHVWVTE E++E LVGVVGYADILAAVT+ P T
Sbjct: 358 KITSSLAAVLAQMLSHRATHVWVTEDENDEVLVGVVGYADILAAVTKPPTT 408


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