BLASTX nr result

ID: Coptis24_contig00011661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011661
         (1435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBS...   472   e-130
ref|XP_002325465.1| predicted protein [Populus trichocarpa] gi|2...   452   e-124
ref|XP_002512622.1| conserved hypothetical protein [Ricinus comm...   445   e-122
ref|XP_003534522.1| PREDICTED: CBS domain-containing protein CBS...   444   e-122
ref|XP_002329005.1| predicted protein [Populus trichocarpa] gi|2...   440   e-121

>ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBSX6 [Vitis vinifera]
            gi|297735292|emb|CBI17654.3| unnamed protein product
            [Vitis vinifera]
          Length = 427

 Score =  472 bits (1214), Expect = e-130
 Identities = 251/396 (63%), Positives = 286/396 (72%), Gaps = 9/396 (2%)
 Frame = +3

Query: 273  MASVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 452
            MASVFLYHVVGDLTVGKPELVEF E E++ESAIR IGE  EG IP+WKR+ H GV+    
Sbjct: 1    MASVFLYHVVGDLTVGKPELVEFPETETVESAIRVIGESAEGSIPIWKRRSHVGVM---- 56

Query: 453  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSLLKEVDPGTR 632
             E SE R QRF+GI+NSLD+V +L+++ CL DQEKAMKTPVSEVVVPN SLL+EVDP TR
Sbjct: 57   -EKSEMRQQRFVGILNSLDIVAFLARDACLVDQEKAMKTPVSEVVVPNNSLLREVDPATR 115

Query: 633  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINTXXXXXXXXXXXTRP-- 806
            LIDALE+MK G++RLLVPKSV W+GMSKRFSI+YNGKWLKN++             RP  
Sbjct: 116  LIDALEMMKHGLKRLLVPKSVVWKGMSKRFSILYNGKWLKNLDASSSSTNLAPNANRPSS 175

Query: 807  ---PSFRENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALEV 977
               PS R NKFCCLSREDVIRF                     ++P+Y+ IEAS PA++V
Sbjct: 176  SSTPSSR-NKFCCLSREDVIRFVIGCLGALAPLPLSSISSLGAISPNYYSIEASFPAIQV 234

Query: 978  NHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEEN 1157
                P DP AVAV+EST DG  KIIGEISA KLWKCDY            GQFV+GVE+N
Sbjct: 235  TQKLPQDPSAVAVVESTPDGQYKIIGEISACKLWKCDYLAAAWALANLSAGQFVMGVEDN 294

Query: 1158 TSPGSLPDFSINSL--EDNAGVGGA--RLRKFSSRSIGFFSSLTSPTIGMGRSMYRGRSA 1325
             +  SLP FS+N    E+N   GGA  R RKFSSRSIGFFS+  SP+ G  RSMYRGRSA
Sbjct: 295  VTSRSLPHFSVNLTGGENNMANGGASTRQRKFSSRSIGFFSNPASPSFGASRSMYRGRSA 354

Query: 1326 PLTCKVTSSLAAVMAQMLSHRATHVWVTEVEDEESL 1433
            PLTCKVTSSLAAVMAQMLSHRATHVWVTE E E+ L
Sbjct: 355  PLTCKVTSSLAAVMAQMLSHRATHVWVTEAESEDIL 390


>ref|XP_002325465.1| predicted protein [Populus trichocarpa] gi|222862340|gb|EEE99846.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  452 bits (1162), Expect = e-124
 Identities = 238/397 (59%), Positives = 283/397 (71%), Gaps = 10/397 (2%)
 Frame = +3

Query: 273  MASVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 452
            M SVFLYHVVGDLTVGKPE+VEFYE E++ESAIRAIGE TE GIPVWKRK H G++    
Sbjct: 1    MPSVFLYHVVGDLTVGKPEMVEFYETETVESAIRAIGESTECGIPVWKRKSHVGMI---- 56

Query: 453  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSLLKEVDPGTR 632
             ENSE R+QRF+GI+NSLD+V +L+  ECL+D++KA+KTPVS+VVVPN SLLK+VDP TR
Sbjct: 57   -ENSETRLQRFVGILNSLDIVAFLASTECLEDRDKAIKTPVSQVVVPNTSLLKQVDPATR 115

Query: 633  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT--XXXXXXXXXXXTRP 806
            LIDALE+MKQGVRRL+VPKS+ W+GMSKRFSI+YNGKWLKN +T              RP
Sbjct: 116  LIDALEMMKQGVRRLIVPKSMGWKGMSKRFSILYNGKWLKNADTSNSSSNNNLTINPNRP 175

Query: 807  PS----FRENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 974
             S       +KFCCLSREDVIRF                     +N +Y+ +EAS PA+E
Sbjct: 176  SSSSGTSNRDKFCCLSREDVIRFLIGCLGALAPLPLSSISSLGAINTNYNSLEASLPAIE 235

Query: 975  VNHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEE 1154
                 P DP A+AV+E   +G  KIIGEISAS+LWKCDY            GQFV+GVE+
Sbjct: 236  ATRKLPEDPSAIAVVEPIPNGQCKIIGEISASRLWKCDYLAAAWALANLSAGQFVMGVED 295

Query: 1155 NTSPGSLPDFSINSLEDN----AGVGGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGRS 1322
            N +  SLPDF++NS  D+     G G  RLRKFSSRSIGF       +IG+GRS+YRGRS
Sbjct: 296  NVTSRSLPDFAVNSAADDDNTAHGAGSTRLRKFSSRSIGF---NPGNSIGIGRSVYRGRS 352

Query: 1323 APLTCKVTSSLAAVMAQMLSHRATHVWVTEVEDEESL 1433
            APLTCK+TSSLAAVMAQMLSHRATHVWV E   ++ L
Sbjct: 353  APLTCKITSSLAAVMAQMLSHRATHVWVIEDHSDDIL 389


>ref|XP_002512622.1| conserved hypothetical protein [Ricinus communis]
            gi|223548583|gb|EEF50074.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 432

 Score =  445 bits (1144), Expect = e-122
 Identities = 240/403 (59%), Positives = 285/403 (70%), Gaps = 16/403 (3%)
 Frame = +3

Query: 273  MASVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 452
            MASVFLYHVVGDLTVGKPE+VEF E E++ESAIRAIGE TE GIPVWKR+ H     VN 
Sbjct: 1    MASVFLYHVVGDLTVGKPEMVEFCETETVESAIRAIGESTECGIPVWKRRSH-----VNM 55

Query: 453  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSLLKEVDPGTR 632
             EN+E R QRF+GI+NSLD+V +L+K +CL+DQEKAMKTPVSEVVVP+ SLLK+VDP TR
Sbjct: 56   IENNEMRQQRFVGILNSLDIVAFLAKAQCLEDQEKAMKTPVSEVVVPDNSLLKQVDPATR 115

Query: 633  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT--------XXXXXXXX 788
            LIDALE+MKQGV+RLLV K   W+GMSKRFSI+YNGKWLKN+++                
Sbjct: 116  LIDALEMMKQGVKRLLVSKGTVWKGMSKRFSILYNGKWLKNVDSSNSSNNLMGNSSNNLM 175

Query: 789  XXXTRPPS----FRENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEA 956
               +RP S       +KFCCLSREDVIRF                     +N +Y+ +EA
Sbjct: 176  SNISRPSSSSTTISRDKFCCLSREDVIRFIIGCLGALAPLPLSSISSLGAINFNYYSVEA 235

Query: 957  SSPALEVNHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQF 1136
            S  A+E     P DP AVAV+E   DG SKIIGEISAS+LWKCDY            GQF
Sbjct: 236  SLSAIEATQKLPKDPCAVAVVEPMPDGHSKIIGEISASRLWKCDYLAAAWALANLSSGQF 295

Query: 1137 VLGVEENTSPGSLPDFSINS-LEDN---AGVGGARLRKFSSRSIGFFSSLTSPTIGMGRS 1304
            V+GVE+N +  SLPDF++NS + DN    G G  R +KFSS+SIGF  +  S + G+GRS
Sbjct: 296  VMGVEDNLTARSLPDFTVNSTVSDNNTANGGGSTRPKKFSSKSIGF--NPGSSSFGIGRS 353

Query: 1305 MYRGRSAPLTCKVTSSLAAVMAQMLSHRATHVWVTEVEDEESL 1433
            MYRGRSAPLTCK+TSSLAAVMAQMLSHRATHVWVTE +++E L
Sbjct: 354  MYRGRSAPLTCKITSSLAAVMAQMLSHRATHVWVTEADNDEVL 396


>ref|XP_003534522.1| PREDICTED: CBS domain-containing protein CBSX6-like [Glycine max]
          Length = 425

 Score =  444 bits (1142), Expect = e-122
 Identities = 235/396 (59%), Positives = 285/396 (71%), Gaps = 9/396 (2%)
 Frame = +3

Query: 273  MASVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 452
            MASVF+YHVVGDLTVGKPEL EF+E+E++ESAIRAIGEC EG IP+WK++   G+     
Sbjct: 1    MASVFVYHVVGDLTVGKPELAEFHESETVESAIRAIGECHEGTIPIWKKRSQLGI----- 55

Query: 453  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSLLKEVDPGTR 632
             ENS+ R QRF+GI++S D+V +L+K +CL+DQ+KA+KTPVSEVVV N SLL+ VDP TR
Sbjct: 56   -ENSDMRQQRFVGILSSFDIVAFLAKSQCLEDQDKALKTPVSEVVVHNNSLLRVVDPATR 114

Query: 633  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT-XXXXXXXXXXXTRPP 809
            LIDAL++MKQGV+RLLVPKSVAW+GMSKRFS+IY GKWLKN  +             R P
Sbjct: 115  LIDALDMMKQGVKRLLVPKSVAWKGMSKRFSVIYYGKWLKNSESPGNSSNNLPLNMNRSP 174

Query: 810  SFR----ENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALEV 977
            S       +++CCLSREDV+RF                     +N +Y+YIE+S+PA+E 
Sbjct: 175  STSITPIRDRYCCLSREDVLRFIIGCLGALAPLPLTSIASLGAINSNYNYIESSTPAIEA 234

Query: 978  NHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEEN 1157
                P DP AVAVIESTSDG  KIIGEISA KLWKCDY            GQFV+GVE+N
Sbjct: 235  TQKLPQDPSAVAVIESTSDGQCKIIGEISACKLWKCDYLSAAWALANLSAGQFVMGVEDN 294

Query: 1158 TSPGSLPDFSI---NSLEDNAGVGGARL-RKFSSRSIGFFSSLTSPTIGMGRSMYRGRSA 1325
             +P SLP FS+   +   D A  GG+R  RKFSSRS+GFFS+  S + G  RSMYRGRSA
Sbjct: 295  VTPRSLPQFSLDLASGENDLANGGGSRKPRKFSSRSVGFFSNTASHSFG-SRSMYRGRSA 353

Query: 1326 PLTCKVTSSLAAVMAQMLSHRATHVWVTEVEDEESL 1433
            PLTCK+TSSLAAV+AQMLSHRATHVWVTE E++E L
Sbjct: 354  PLTCKITSSLAAVLAQMLSHRATHVWVTEDENDEVL 389


>ref|XP_002329005.1| predicted protein [Populus trichocarpa] gi|222839239|gb|EEE77590.1|
            predicted protein [Populus trichocarpa]
          Length = 424

 Score =  440 bits (1132), Expect = e-121
 Identities = 240/397 (60%), Positives = 277/397 (69%), Gaps = 10/397 (2%)
 Frame = +3

Query: 273  MASVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 452
            MASVFLYHVVGDLTVGKPE+VEFYE E++ESAIRAIGE TE GIPVWKRK H     V+ 
Sbjct: 1    MASVFLYHVVGDLTVGKPEMVEFYETETVESAIRAIGESTECGIPVWKRKSH-----VSM 55

Query: 453  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSLLKEVDPGTR 632
             E SE R QRF+GI+NSLD+V +L+  ECL+DQ+KA+KT VS+VVVPN SLLK+VDP TR
Sbjct: 56   IETSEMRQQRFVGILNSLDIVAFLASTECLEDQDKAIKTSVSQVVVPNASLLKQVDPATR 115

Query: 633  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNIN-TXXXXXXXXXXXTRPP 809
            LIDALE+MKQGVRRLLVPKS+ W+GMSKRFS +YNGKWLKN + +           T  P
Sbjct: 116  LIDALEMMKQGVRRLLVPKSMVWKGMSKRFSFLYNGKWLKNADASNNSSNNNLTINTNRP 175

Query: 810  S-----FRENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 974
            S        NKFCCLSREDVIRF                    V+NP+Y  +EAS PA E
Sbjct: 176  SSSSGTSNRNKFCCLSREDVIRFLIGCLGALAPLPLSSISSLGVINPNYTSVEASLPAFE 235

Query: 975  VNHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEE 1154
                   DP  VAV+E   DG  KIIGEISAS+LWKCDY            GQFV+GVE+
Sbjct: 236  ATRKLHGDPSEVAVVEPIPDGQCKIIGEISASRLWKCDYLAAAWALANLSAGQFVMGVED 295

Query: 1155 NTSPGSLPDFSINSL---EDNA-GVGGARLRKFSSRSIGFFSSLTSPTIGMGRSMYRGRS 1322
            N +  SL DF++NS    E  A G+G  RLR+FSSRSIGF       +I MGRSMYRGRS
Sbjct: 296  NETARSLLDFAVNSAVGDESTANGIGSTRLREFSSRSIGF---NPGSSIRMGRSMYRGRS 352

Query: 1323 APLTCKVTSSLAAVMAQMLSHRATHVWVTEVEDEESL 1433
            APLTCK+TSSLAAVMAQMLSHRATHVWV E + ++ L
Sbjct: 353  APLTCKITSSLAAVMAQMLSHRATHVWVIEDDSDDIL 389


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