BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011656
         (3358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   577   e-161
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   569   e-159
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   540   e-150
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   539   e-150
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   536   e-149

>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  577 bits (1486), Expect = e-161
 Identities = 353/1082 (32%), Positives = 556/1082 (51%), Gaps = 13/1082 (1%)
 Frame = +2

Query: 23   LKVWNKKHYRRLQESMTSTISQLNWIQSLPPNPHNTVSEACLQLQLDRLMLSEEMKWRDK 202
            LK W+ +    + + +    S L  +Q  P +  N  +   L+ +LD L   +E +W  +
Sbjct: 282  LKSWSSEKGGNIGKQLGRVESDLCRLQQQPISSANCEARLTLEKKLDELHAKQEARWYLR 341

Query: 203  SRVCYLKCGDQSTKFFHLSTLDRKRQNGIYCIKNESGDWLYNQSDIGKHIVSFFQDLFTS 382
            SR   ++ GD++TK+FH     RK++N +  + + SG W     DI      +F  +FTS
Sbjct: 342  SRAMEVRDGDRNTKYFHHKASQRKKRNFVKGLFDASGTWCEEVDDIECVFTDYFTSIFTS 401

Query: 383  TTPAVPQIFDEF---KPLVSHDDNEILTRVISMEEIHAAVFDMGPYKSPGPDGFTPLFFQ 553
            T P+  Q+ D      P+V+ + N  L +  S EE++ A+  M P K+PGPDG   +F+Q
Sbjct: 402  TNPSDVQLNDVLCCVDPVVTEECNTWLLKPFSKEELYVALSQMHPCKAPGPDGMHAIFYQ 461

Query: 554  KCWHFVKDDLYRMVSQFFQTGHFLRQLNHTHITLVPKSPHPSSIKDYRPISLCNTAYRII 733
            K WH + DD+ + VS           +NHT+I L+PK  +P++  ++RPI+LCN  Y+++
Sbjct: 462  KFWHIIGDDVTQFVSSILHGSISPSCINHTNIALIPKVKNPTTPAEFRPIALCNVVYKLV 521

Query: 734  SKILVNRLKPLLDKIILPHQNAFVKRRQISDNSIMVHEILHYFK-KKKGISGCCAAKLDM 910
            SK LV RLK  L +++  +Q+AFV  R I+DN+++  E+ H  K + +   G  A KLDM
Sbjct: 522  SKALVIRLKDFLPRLVSENQSAFVPGRLITDNALIAMEVFHSMKHRNRSRKGTIAMKLDM 581

Query: 911  NKAFDRIEWNFVITSLRSLGFCQTWCDWIYSCISSTSFSVKVNGSPHGFFKPSRGLRQGD 1090
            +KA+DR+EW F+   L ++GF   W + I SC+SS S+S  +NG   G   P+RGLR GD
Sbjct: 582  SKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVSSVSYSFIINGGVCGSVTPARGLRHGD 641

Query: 1091 PLSPALFIICTXXXXXXXXXXXXKKFIHGVKVGRKCPPVSHLLFADDSFVFFRANLSEAG 1270
            PLSP LFI+              +K +HG K  R  P +SHL FAD S +F RA+  E  
Sbjct: 642  PLSPYLFILIADAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQECA 701

Query: 1271 HVKDLLDLYCAFSGQSINNQKSSLTFSHNLPRRTKKLISDVLNIPVSSRESKYLGIPTNP 1450
             + ++L+LY   SGQ IN  KS ++FS  +    K+ +S++L +    R  KYLGIP+  
Sbjct: 702  IIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSIT 761

Query: 1451 SKPSKLSFNHIIDRVSSKIEGWHSKCLSQAGKLTLIKSVSSAIPTFSMSTFLLSKDMCDR 1630
             +     F+ ++DR+  K++GW  K LS+AGK  L+KSV  AIPT+ M  + L   +  +
Sbjct: 762  GRSRTAIFDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQK 821

Query: 1631 LDRLNRKFLWQSDPEKSRNLHLINWSTICSKKSIGGLGVRSMRLHNIALLSKLCWQLTER 1810
            +     +F W S  +  R +H  NW ++C+ K  GG+G R +R+ N ALL +  W+L   
Sbjct: 822  IHSAMARFWWGSS-DTQRRIHWKNWDSLCTLKCFGGMGFRDLRVFNDALLGRQAWRLVRE 880

Query: 1811 SQNQWCTMVKHKYFPNEPFLRAPLKQNASRFWRNLVTVRDEIQRFICWQIKSGRDILIWD 1990
              +    ++K KY+ N  FL APL  + S  WR++ + +  ++  + W+I +G ++ IW+
Sbjct: 881  PHSLLARVMKAKYYSNHDFLDAPLGVSTSYSWRSIWSSKALLKEGMVWRIGNGTNVRIWE 940

Query: 1991 ENWIPSLDHRRPMGPNPNKPGLQYVSDLIKENSL-WDEPLIRSNFLPHEVHAILAIKLPH 2167
            + W+  LD       +     L  VS+LI  + + W   LI + F   ++  IL+I  P 
Sbjct: 941  DPWV--LDELGRFITSEKHGNLNMVSELIDFDRMEWKVSLIETVFNERDIKCILSI--PL 996

Query: 2168 NGSGCSDKLVWLSEKNGKFSVKAAYN-GLSSSLTPTHTSVMQPLWKHIWKIGAPHRVKLF 2344
            +     D+L W   KN  +SVK AY  G   +L   H +     W  IW +    +VK F
Sbjct: 997  SSLPLKDELTWAFTKNAHYSVKTAYMLGKGGNLDSFHQA-----WIDIWSMEVSPKVKHF 1051

Query: 2345 LWKTMHNCLPVKEFLSVRNISSNNICPRCTSQPETVTHALLTCPFVSRVWFASSFSWRPE 2524
            LW+   N LPV+  L  R++  +++CPR   +PE+  HA+  CPF+  +W  S       
Sbjct: 1052 LWRLGTNTLPVRSLLKHRHMLDDDLCPRGCGEPESQFHAIFGCPFIRDLWVDSGCD-NFR 1110

Query: 2525 FWNHDISISEVVRNLKQCSPSKTAFISLLTDFALNAYFIWLSRNCFIFKGKEEYIPVILA 2704
                D +++E + N      S     S+ T  A  A+ +W  RN  +F        ++LA
Sbjct: 1111 ALTTDTAMTEALVN------SHGLDASVRTKGAFMAWVLWSERNSIVFNQSSTPPHILLA 1164

Query: 2705 QARHSNTIIDRTPT------PFRAILIELSAKLHPLLSNGYLLLFSDASFYSSGHDAGLG 2866
            +    + +++   T      P R      SA++        + L  DAS  S+G   GL 
Sbjct: 1165 RV---SRLVEEHGTYTARIYPNRNCCAIPSARVWAAPPPEVIKLNVDASLASAGW-VGLS 1220

Query: 2867 FIAYNSHESTPFAGCDKVKVSXXXXXXXXXVFN-GLQASFNHGIKKVVVASDCLSLVNAL 3043
             IA +SH +  FA   KV+                L+    +G   ++V SDC  +VN L
Sbjct: 1221 VIARDSHGTVLFAAVRKVRAQWSAEIAEAKAIEMALRLGRRYGFAAIIVESDCQVVVNRL 1280

Query: 3044 SVNLDNLSWTNSILVHDILKLVESFSSVIFVYIPRFCNTASHHLAAWGFLFGHNFWTEDV 3223
            S     L+    I++H+I     +F SV++ ++ R  N+ +HHLA          W   V
Sbjct: 1281 SKQALYLA-DLDIILHNIFSSCINFPSVLWSHVKRDANSVAHHLAKLTPFGIEQIWENHV 1339

Query: 3224 PP 3229
            PP
Sbjct: 1340 PP 1341


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  569 bits (1467), Expect = e-159
 Identities = 355/1103 (32%), Positives = 550/1103 (49%), Gaps = 18/1103 (1%)
 Frame = +2

Query: 2    LKQVKESLKVWNKKHYRRLQESMTSTISQLNWIQSLPPNPHNTVSEACLQLQLDRLMLSE 181
            L +    L  W+K+ +  + + +     Q+  +    P+  N +    L  ++D L   E
Sbjct: 282  LARTANKLLSWSKQKFGHVAKEIRMCQHQMKVLMESEPSEDNIMHMRALDARMDELEKRE 341

Query: 182  EMKWRDKSRVCYLKCGDQSTKFFHLSTLDRKRQNGIYCIKNESGDWLYNQSDIGKHIVSF 361
            E+ W  +SR  ++K GD++TKFFH     R+++N +  I+NE+G+W  ++ D+ +    +
Sbjct: 342  EVYWHQRSRQDWIKSGDKNTKFFHQKASHREQRNNVRRIRNEAGEWFEDEDDVTECFAHY 401

Query: 362  FQDLFTSTTPA-VPQIFDEFKPLVSHDDNEILTRVISMEEIHAAVFDMGPYKSPGPDGFT 538
            F++LF S     +  I +  KP ++ +    L      EE+ AA+  M P K+PGPDG  
Sbjct: 402  FENLFQSGNNCEMDPILNIVKPQITDELGTQLDAPFRREEVSAALAQMHPNKAPGPDGMN 461

Query: 539  PLFFQKCWHFVKDDLYRMVSQFFQTGHFLRQLNHTHITLVPKSPHPSSIKDYRPISLCNT 718
             LF+Q  W  + +D+   V         +  +N THI L+PK  H  S  D+RPISLCN 
Sbjct: 462  ALFYQHFWDTIGEDVTTKVLNMLNNVDNIGAVNQTHIVLIPKKKHCESPVDFRPISLCNV 521

Query: 719  AYRIISKILVNRLKPLLDKIILPHQNAFVKRRQISDNSIMVHEILHYFKKKK-GISGCCA 895
             Y+I++K+L NR+K +L  +I   Q+ FV  R I+DN ++ +E  H+ +KKK G  G   
Sbjct: 522  LYKIVAKVLANRMKMVLPMVIHESQSGFVPGRLITDNVLVAYECFHFLRKKKTGKKGYLG 581

Query: 896  AKLDMNKAFDRIEWNFVITSLRSLGFCQTWCDWIYSCISSTSFSVKVNGSPHGFFKPSRG 1075
             KLDM+KA+DR+EW F+   +  LGF   +   + +C++S  FSV VNG P   F PSRG
Sbjct: 582  LKLDMSKAYDRVEWCFLENMMLKLGFPTRYTKLVMNCVTSARFSVLVNGQPSRNFFPSRG 641

Query: 1076 LRQGDPLSPALFIICTXXXXXXXXXXXXKKFIHGVKVGRKCPPVSHLLFADDSFVFFRAN 1255
            LRQGDPLSP LF++C             KK IHGVK+G +  P+SHL FADDS +F RA 
Sbjct: 642  LRQGDPLSPFLFVVCAEGLSTLLRDAEEKKVIHGVKIGHRVSPISHLFFADDSLLFIRAT 701

Query: 1256 LSEAGHVKDLLDLYCAFSGQSINNQKSSLTFSHNLPRRTKKLISDVLNIPVSSRESKYLG 1435
              E  +V D+L  Y A SGQ +N +KS +++S NL       +   L         KYLG
Sbjct: 702  EEEVENVMDILSTYEAASGQKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEGHEKYLG 761

Query: 1436 IPTNPSKPSKLSFNHIIDRVSSKIEGWHSKCLSQAGKLTLIKSVSSAIPTFSMSTFLLSK 1615
            +PT      K  F  I DRV  K++GW  K LSQAG+  LIK+V+ AIPT++M  F++ K
Sbjct: 762  LPTFIGSSKKRVFQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPK 821

Query: 1616 DMCDRLDRLNRKFLWQSDPEKSRNLHLINWSTICSKKSIGGLGVRSMRLHNIALLSKLCW 1795
             + D ++++ R F W    E+ R +  + W  +   K  GGLG+R+  + N ALL+K  W
Sbjct: 822  SIIDGIEKMCRNFFW-GQKEEERRVAWVAWEKLFLPKKEGGLGIRNFDVFNRALLAKQAW 880

Query: 1796 QLTERSQNQWCTMVKHKYFPNEPFLRAPLKQNASRFWRNLVTVRDEIQRFICWQIKSGRD 1975
            ++  +  +    ++K KYFP   FL A +  N S   +++++ R  IQ+ +C  I  GRD
Sbjct: 881  RILTKPDSLMARVIKGKYFPRSNFLEARVSPNMSFTCKSILSARAVIQKGMCRVIGDGRD 940

Query: 1976 ILIWDENWIPSLDHRRPMGPN--PNKPGLQYVSDLIKENSLWDEPLIRSNFLPHEVHAIL 2149
              IW + W+PSL+              G Q V +LI  N  W+  L+ + F P E  AI 
Sbjct: 941  TTIWGDPWVPSLERYSIAATEGVSEDDGPQKVCELI-SNDRWNVELLNTLFQPWESTAIQ 999

Query: 2150 AIKLPHNGSGCSDKLVWLSEKNGKFSVKAAY---------NGLSSSLTPTHTSVMQPLWK 2302
              ++P       D+ +W+  KNG+F+V++AY          G S+S  P        LW+
Sbjct: 1000 --RIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPN-----LKLWQ 1052

Query: 2303 HIWKIGAPHRVKLFLWKTMHNCLPVKEFLSVRNISSNNICPRCTSQPETVTHALLTCPFV 2482
             IWK   P +VKLF WK +HN L V   +  R ++ +  CPRC  + ET  H +  C   
Sbjct: 1053 KIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDES 1112

Query: 2483 SRVWFASSFSWRPEFWNHDISISEVVRNLKQCSPSKTAFISLLTDFALNAYFIWLSRNCF 2662
            SR W+ S    R    N +     +       +   T + +L   F +  + IWL RN +
Sbjct: 1113 SRAWYISPL--RIHTGNIEAGSFRIWVESLLDTHKDTEWWAL---FWMICWNIWLGRNKW 1167

Query: 2663 IFKGKEEYIPVILAQARHSNTIIDRT---PTPFRAILIELSAKLHPLLSNGYLLLFSDAS 2833
            +F+ K+     ++ +A       +      +P   +    +    P +  G + L  DA+
Sbjct: 1168 VFEKKKLAFQEVVERAVRGVMEFEEECAHTSPVETLNTHENGWSVPPV--GMVKLNVDAA 1225

Query: 2834 FYSSGHDAGLGFIAYNSHESTPFAG-CDKVKVSXXXXXXXXXVFNGLQASFNHGIKKVVV 3010
             +      G+G +  ++      A  C    +          +  GL+ ++  G + +VV
Sbjct: 1226 VFKH-VGIGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSLRYGLKVAYEAGFRNLVV 1284

Query: 3011 ASDCLSLVNALSVNLDNLSWTNSILVHDILKLVESFSSVIFVYIPRFCNTASHHLAAW-G 3187
              DC  L   L     +++    + V DIL L    S+V+F ++ R CN  +H LA    
Sbjct: 1285 EMDCKKLFLQLRGKASDVTPFGRV-VDDILYLASKCSNVVFEHVKRHCNKVAHLLAQMCK 1343

Query: 3188 FLFGHNFWTEDVPPISKSLIAND 3256
                   W E+ P    S +  D
Sbjct: 1344 NAMEKRVWLEEYPSEVSSAVLLD 1366


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  540 bits (1390), Expect = e-150
 Identities = 348/1094 (31%), Positives = 543/1094 (49%), Gaps = 36/1094 (3%)
 Frame = +2

Query: 2    LKQVKESLKVWNKKHYRRLQESMTSTISQLNWIQSLPPNPHNTVSEACLQLQLDRLMLSE 181
            L   + ++  W K      ++++    ++L+  Q         ++E  L L+L      E
Sbjct: 59   LTNCRRAISKWRKSLIPFGRQTIEDLKAELDVAQRDDDRSREEITE--LTLRLKEAYRDE 116

Query: 182  EMKWRDKSRVCYLKCGDQSTKFFHLSTLDRKRQNGIYCIKNESGDWLYNQSDIGKHIVSF 361
            E  W  KSR  ++K GD ++KFFH  T  R+ +N I  + +E+G W     DI    VS+
Sbjct: 117  EQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIEDDDIQNIAVSY 176

Query: 362  FQDLFTSTTPAVPQIFDE----FKPLVSHDDNEILTRVISMEEIHAAVFDMGPYKSPGPD 529
            FQ+LFT+   A PQ+FDE     + L++   N++LT   +  E+ AA+F + P K+PGPD
Sbjct: 177  FQNLFTT---ANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPEKAPGPD 233

Query: 530  GFTPLFFQKCWHFVKDDLYRMVSQFFQTGHFLRQLNHTHITLVPKSPHPSSIKDYRPISL 709
            G T LFFQK W  +K DL  +V+ F Q G F ++LN T+I L+PK+  P+ + + RPISL
Sbjct: 234  GMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELRPISL 293

Query: 710  CNTAYRIISKILVNRLKPLLDKIILPHQNAFVKRRQISDNSIMVHEILHYFKKKKGISG- 886
            CN  Y++ISKIL  RLK +L  +I   Q+AFV  R ISDN ++  E+ H  +        
Sbjct: 294  CNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQEMFHGLRTNSSCKDK 353

Query: 887  CCAAKLDMNKAFDRIEWNFVITSLRSLGFCQTWCDWIYSCISSTSFSVKVNGSPHGFFKP 1066
              A K DM+KA+D++EWNF+   LR +GFC+ W  WI  CI++  + V +NG P G   P
Sbjct: 354  FMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKGLIIP 413

Query: 1067 SRGLRQGDPLSPALFIICTXXXXXXXXXXXXKKFIHGVKVGRKCPPVSHLLFADDSFVFF 1246
             RGLRQGDPLSP LFI+CT            +  I G+KV    P VSHLLFADDS  F 
Sbjct: 414  ERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDSLFFC 473

Query: 1247 RANLSEAGHVKDLLDLYCAFSGQSINNQKSSLTFSHNLPRRTKKLISDVLNIPVSSRESK 1426
            +AN  + G + ++L  Y + SGQ IN  KSS+ F H +    K  I  +L I        
Sbjct: 474  KANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGMGS 533

Query: 1427 YLGIPTNPSKPSKLSFNHIIDRVSSKIEGWHSKCLSQAGKLTLIKSVSSAIPTFSMSTFL 1606
            YLG+P +        F+ + DR+ S+I GW +K LS+ GK  +IKSV++ +P + MS F 
Sbjct: 534  YLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFR 593

Query: 1607 LSKDMCDRLDRLNRKFLWQSDPEKSRNLHLINWSTICSKKSIGGLGVRSMRLHNIALLSK 1786
            L K +  +L     KF W S+ + SR +H + W  +CS KS GGLG R++   N ALL+K
Sbjct: 594  LPKAITSKLTSAVAKFWWSSNGD-SRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAK 652

Query: 1787 LCWQLTERSQNQWCTMVKHKYFPNEPFLRAPLKQNASRFWRNLVTVRDEIQRFICWQIKS 1966
              W+L     + +  + K +YF     L +    + S  WR++++ R  + + +  ++ S
Sbjct: 653  QLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGWRSMISARSLVYKGLIKRVGS 712

Query: 1967 GRDILIWDENWIPSLDHR-RPMGPNPNKPGLQYVSDLIKENSLWDEPLIRSNFLPHEVHA 2143
            G  I +W++ WIP+   R    G +   P L+  S +   ++ W+  L++  F P +V  
Sbjct: 713  GASISVWNDPWIPAQFPRPAKYGGSIVDPSLKVKSLIDSRSNFWNIDLLKELFDPEDVPL 772

Query: 2144 ILAIKLPHNGSGCSDKLVWLSEKNGKFSVKAAYNGLSSSLTPTHTSV---MQPLWKHIWK 2314
            I A  LP       D L W   K G ++VK+ Y+     L    T +   +  L  +IWK
Sbjct: 773  ISA--LPIGNPNMEDTLGWHFTKAGNYTVKSGYHTARLDLNEGTTLIGPDLTTLKAYIWK 830

Query: 2315 IGAPHRVKLFLWKTMHNCLPVKEFLSVRNISSNNICPRCTSQPETVTHALLTCPFVSRVW 2494
            +  P +++ FLW+ +  C+PV E L  R I  +  C  C +  E++ H L  C    ++W
Sbjct: 831  VQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIW 890

Query: 2495 FASSFSWRPEFWNHDISISEVVRNLKQCSPSKTAFISLLTDFALNAYFIWLSRNCFIFKG 2674
              S     P  +  + SI   + +L    PS          +    ++IW +RN  +F+ 
Sbjct: 891  ALSQIPTAPGIFPSN-SIFTNLDHLFWRIPSGVD----SAPYPWIIWYIWKARNEKVFEN 945

Query: 2675 -KEEYIPVILAQARHSNTIIDRTPTPFRAILIELSAKLHPLLS----------------N 2803
              ++ + ++L   + + +        ++   +EL ++ H  LS                +
Sbjct: 946  VDKDPMEILLLAVKEAQS--------WQEAQVELHSERHGSLSIDSRIRVRDVSQDTTFS 997

Query: 2804 GYLLLFSDASFYSSGHDAGLGFIAYNSHESTPFAGCDKVKVS-XXXXXXXXXVFNGLQAS 2980
            G+   F D S+ +S   +G G+   +S   +P  G   V+ S          +   ++  
Sbjct: 998  GF-RCFIDGSWKASDQFSGTGWFCLSSLGESPTMGAANVRRSLSPLHTEMEALLWAMKCM 1056

Query: 2981 FNHGIKKVVVASDCLSLVN---------ALSVNLDNLSWTNSILVHDILKLVESFSSVIF 3133
                 + V   +DC  LV          A SV L+ L        +  L L+   ++V  
Sbjct: 1057 IGADNQNVAFFTDCSDLVKMVSSPTEWPAFSVYLEELQSDREEFTNFSLSLISRSANVKA 1116

Query: 3134 VYIPRFCNTASHHL 3175
              + R   T  HH+
Sbjct: 1117 DKLARKIRTVPHHV 1130


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  539 bits (1388), Expect = e-150
 Identities = 348/1080 (32%), Positives = 531/1080 (49%), Gaps = 19/1080 (1%)
 Frame = +2

Query: 2    LKQVKESLKVWNKKHYRRLQESMTSTISQLNWIQSLPPNPHNTVSEACLQLQLDRLMLSE 181
            L +V  SL  W  K +  L++     ++ LN +Q   P+         +   LD +   E
Sbjct: 276  LDEVSRSLSTWATKTFGNLKKRKKEALTLLNGLQQRDPDASTLEQCRIVSGDLDEIHRLE 335

Query: 182  EMKWRDKSRVCYLKCGDQSTKFFHLSTLDRKRQNGIYCIKNESGDWLYNQSDIGKHIVSF 361
            E  W  ++R   ++ GD++TK+FH     RKR+N I  + +E+G W   + +I   +  +
Sbjct: 336  ESYWHARARANEIRDGDKNTKYFHHKASQRKRRNTINELLDENGVWKKGREEICGVVQHY 395

Query: 362  FQDLFTSTTPAVPQI-FDEFKPLVSHDDNEILTRVISMEEIHAAVFDMGPYKSPGPDGFT 538
            F+ LF + +P   ++  +     VS D N  L  + S +E+  A+F M P K+PG DG  
Sbjct: 396  FEGLFATDSPVNMELALEGLSHCVSTDMNTALLMLPSGDEVKEALFAMHPNKAPGIDGLH 455

Query: 539  PLFFQKCWHFVKDDLYRMVSQFFQTGHFLRQLNHTHITLVPKSPHPSSIKDYRPISLCNT 718
             LFFQK WH +  D+   V  +++    L  +N T I L+PK  HP S+KD+RPISLC  
Sbjct: 456  ALFFQKFWHILGSDVISFVQSWWRGMGDLGVVNKTCIVLIPKCDHPQSMKDFRPISLCTV 515

Query: 719  AYRIISKILVNRLKPLLDKIILPHQNAFVKRRQISDNSIMVHEILHYFKKKKGI-SGCCA 895
             Y+I+SK L NRLK +L  II P+Q+AFV RR I+DN+++  EI H  K+K    +G CA
Sbjct: 516  LYKILSKTLANRLKVILPAIISPNQSAFVPRRLITDNALVAFEIFHAMKRKDANKNGVCA 575

Query: 896  AKLDMNKAFDRIEWNFVITSLRSLGFCQTWCDWIYSCISSTSFSVKVNGSPHGFFKPSRG 1075
             KLDM+KA+DR+EW F+   ++ +GFC  W D + +CISS SF+  VNG   G   PSRG
Sbjct: 576  LKLDMSKAYDRVEWCFLERVMKKMGFCDGWIDRVMACISSVSFTFNVNGVVEGSLSPSRG 635

Query: 1076 LRQGDPLSPALFIICTXXXXXXXXXXXXKKFIHGVKVGRKCPPVSHLLFADDSFVFFRAN 1255
            LRQGDP+SP LF++C             +K IHG ++ R  P VSHL FADDS +F +A+
Sbjct: 636  LRQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFADDSILFTKAS 695

Query: 1256 LSEAGHVKDLLDLYCAFSGQSINNQKSSLTFSHNLPRRTKKLISDVLNIPVSSRESKYLG 1435
            + E   V D++  Y   SGQ +N  K+ + FS ++ R  +  I +VL +    R+ KYLG
Sbjct: 696  VQECSMVADIISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLG 755

Query: 1436 IPTNPSKPSKLSFNHIIDRVSSKIEGWHSKCLSQAGKLTLIKSVSSAIPTFSMSTFLLSK 1615
            +PT   +  K++F  I +R+  K++GW  K LS+ GK  LIKSV+ AIPT+ MS F L  
Sbjct: 756  LPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPS 815

Query: 1616 DMCDRLDRLNRKFLWQSDPEKSRNLHLINWSTICSKKSIGGLGVRSMRLHNIALLSKLCW 1795
             + D +  L  +F W S  + +R +H  +W T+C  KS+GGLG R +   N +LL+K  W
Sbjct: 816  GLIDEIHSLLARFWWGSS-DTNRKMHWHSWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAW 874

Query: 1796 QLTERSQNQWCTMVKHKYFPNEPFLRAPLKQNASRFWRNLVTVRDEIQRFICWQIKSGRD 1975
            +L    Q     +++ +YF +   L A    N S  WR++   +  +   + W + SG  
Sbjct: 875  RLCTGDQTLLYRLLQARYFKSSELLEARRGYNPSFTWRSIWGSKSLLLEGLKWCVGSGER 934

Query: 1976 ILIWDENWIPSLDHRRPMGPNPNKPGL--QYVSDLIK-ENSLWDEPLIRSNFLPHEVHAI 2146
            I +W++ WI  L     M P P         V DLI      W+   ++  F+  E   +
Sbjct: 935  IRVWEDAWI--LGEGAHMVPTPQADSNLDLKVCDLIDVARGAWNIESVQQTFVEEEWELV 992

Query: 2147 LAIKLPHNGSGCSDKLVWLSEKNGKFSVKAAYNGLSSSLTPTHTSVMQ------PLWKHI 2308
            L+I  P +     D   W   +NG FSV++ Y      L P  T  +Q       LW+ +
Sbjct: 993  LSI--PLSRFLPDDHRYWWPSRNGIFSVRSCY--WLGRLGPVRTWQLQHGERETELWRRV 1048

Query: 2309 WKIGAPHRVKLFLWKTMHNCLPVKEFLSVRNISSNNICPRCTSQPETVTHALLTCPFVSR 2488
            W++  P ++  FLW+     L VK  L  R+IS +  C  C    E++ HAL  C F   
Sbjct: 1049 WQLQGPPKLSHFLWRACKGSLAVKGRLFSRHISVDATCSVCGDPDESINHALFDCTFARA 1108

Query: 2489 VWFASSFSWRPEFWNHDISISEVVRNLKQCSPSKTAFISLLTDFALNAYFI---WLSRNC 2659
            +W  S F+        +  +S     L+  +   T       +F     F+   W  RN 
Sbjct: 1109 IWQVSGFA----SLMMNAPLSSFSERLEWLAKHATK-----EEFRTMCSFMWAGWFCRNK 1159

Query: 2660 FIFKGKEEYIPVILAQARHSNTIID---RTPTPFRAILIEL-SAKLHPLLSNGYLLLFSD 2827
             IF+ +    P  L   R S  + D      + FR       S+ L      G   +  D
Sbjct: 1160 LIFENELSDAP--LVAKRFSKLVADYCEYAGSVFRGSGGGCGSSALWSPPPTGMFKVNFD 1217

Query: 2828 ASFYSSGHDAGLGFIAYNSHESTPFAGCDKVKVS-XXXXXXXXXVFNGLQASFNHGIKKV 3004
            A    +G + GLG +   +       G  +V                 ++ +   G  ++
Sbjct: 1218 AHLSPNG-EVGLGVVIRANDGGIKMLGVKRVAARWTAVMAEAMAALFAVEVAHRLGFGRI 1276

Query: 3005 VVASDCLSLVNALSVNLDNLSWTNSILVHDILKLVESFSSVIFVYIPRFCNTASHHLAAW 3184
            V+  D + ++NA+    + ++    I  +DI  L          ++ R  NT +H LA W
Sbjct: 1277 VLEGDAMMVINAVKHKCEGVAPMFRIF-NDISSLGACLDVFSVSHVRRAGNTVAHLLARW 1335


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  536 bits (1382), Expect = e-149
 Identities = 343/1109 (30%), Positives = 542/1109 (48%), Gaps = 24/1109 (2%)
 Frame = +2

Query: 2    LKQVKESLKVWNKKHYRRLQESMTSTISQLNWIQSLPPNPHNTVSEACLQLQLDRLMLSE 181
            L  V   L  W+      L++ +     +L   +  P +    V E  L+ +L++L    
Sbjct: 529  LAGVAAGLSSWSSNVLGDLEKRVKKVKKELETCRRQPISRDQVVREEVLRYRLEKLEQQV 588

Query: 182  EMKWRDKSRVCYLKCGDQSTKFFHLSTLDRKRQNGIYCIKNESGDWLYNQSDIGKHIVSF 361
            ++ W+ ++   +L  GD++T FFH S  +R+R+N I  ++ E G W+  + D    I+ F
Sbjct: 589  DIYWKQRAHTNWLNKGDRNTSFFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEF 648

Query: 362  FQDLFTSTTPAVPQ-IFDEFKPLVSHDDNEILTRVISMEEIHAAVFDMGPYKSPGPDGFT 538
            F+ LFTS      Q + D     VS   NE L    + EE+  A+  +G  K+PGPDG  
Sbjct: 649  FKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMP 708

Query: 539  PLFFQKCWHFVKDDLYRMVSQFFQTGHFLRQLNHTHITLVPKSPHPSSIKDYRPISLCNT 718
              F++ CW  V + +   V +  + G      N   I L+PK   P  IKD RPISLCN 
Sbjct: 709  AGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNV 768

Query: 719  AYRIISKILVNRLKPLLDKIILPHQNAFVKRRQISDNSIMVHEILHYFKKKK-GISGCCA 895
             Y+++SK+L NRLK +L  +I P Q+AFV  R ISDN ++  E+ HY + K+ G  G  A
Sbjct: 769  CYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQVGYAA 828

Query: 896  AKLDMNKAFDRIEWNFVITSLRSLGFCQTWCDWIYSCISSTSFSVKVNGSPHGFFKPSRG 1075
             KLDM+KA+DR+EW+F+   +  LGF   W + I  C+S+ ++ ++VNG     F P RG
Sbjct: 829  FKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRG 888

Query: 1076 LRQGDPLSPALFIICTXXXXXXXXXXXXKKFIHGVKVGRKCPPVSHLLFADDSFVFFRAN 1255
            LRQGDPLSP LF++C             +  +HG+++ +  P VSHLLFADDS +  RAN
Sbjct: 889  LRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRAN 948

Query: 1256 LSEAGHVKDLLDLYCAFSGQSINNQKSSLTFSHNLPRRTKKLISDVLNIPVSSRESKYLG 1435
              EA  ++ +L +Y   SGQ IN  KS++ FS N     K+ +   LN+   +   +YLG
Sbjct: 949  GGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLG 1008

Query: 1436 IPTNPSKPSKLSFNHIIDRVSSKIEGWHSKCLSQAGKLTLIKSVSSAIPTFSMSTFLLSK 1615
            +P    +     F+++ +R+  +I+GW  K LS+AGK  LIK+V+ AIPTF+M  F L+K
Sbjct: 1009 LPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTK 1068

Query: 1616 DMCDRLDRLNRKFLWQSDPEKSRNLHLINWSTICSKKSIGGLGVRSMRLHNIALLSKLCW 1795
            D+CD++ ++  K+ W S+ EK   +H ++W+ +   K++GGLG R + + N+A+L+K  W
Sbjct: 1069 DLCDQISKMIAKY-WWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGW 1127

Query: 1796 QLTERSQNQWCTMVKHKYFPNEPFLRAPLKQNASRFWRNLVTVRDEIQRFICWQIKSGRD 1975
            +L +   +    +++ KYFP     R     N S  WR++      +Q  + W++  G  
Sbjct: 1128 RLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSK 1187

Query: 1976 ILIWDENWIPSLDHRRPMGPNPNKPGLQYVSDLIKENSLWDEPLIRSNFLPHEVHAILAI 2155
            I IW + WIP    R+PM P       +    +      WDE L+   F   +V AI +I
Sbjct: 1188 INIWADPWIPRGWSRKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSI 1247

Query: 2156 KLPHNGSGCSDKLVWLSEKNGKFSVKAAY------------NGLSSSLTPTHTSVMQPLW 2299
             +        D L W  +  G F+VK+AY            NG          S     W
Sbjct: 1248 PVHVE---MEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPG--VSNWESGDDDFW 1302

Query: 2300 KHIWKIGAPHRVKLFLWKTMHNCLPVKEFLSVRNISSNNICPRCTSQPETVTHALLTCPF 2479
            K +WK+G P ++K FLW+  HN L ++  L  R +  +  C  C    E   H    C  
Sbjct: 1303 KKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKP 1362

Query: 2480 VSRVWFASSFSWRPEFWNHDISISEVVRNLKQCSP--SKTAFISLLTDFALNAYFIWLSR 2653
            V +VW A +            S   V++++  C P   +T+ I  L  +       W  R
Sbjct: 1363 VKKVWQALNLEELRSMLEQQTSGKNVLQSI-YCRPENERTSAIVCLWQW-------WKER 1414

Query: 2654 NCF----IFKGKEEYIPVILAQARHSNTIIDRTPTPFRAILIELSAKLHPLLSNGYLLLF 2821
            N      I +   E   +I++QA     +  +  +P      E +    P L+  ++ + 
Sbjct: 1415 NEVREGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPRTG---ECAVWRRPPLN--FVKIN 1469

Query: 2822 SDASFYSSGHDAGLGFIAYNSHESTPFAGCDKVK-VSXXXXXXXXXVFNGLQASFNHGIK 2998
            +D ++ S+    G GF+  +   +   AG      +              ++ +   G+ 
Sbjct: 1470 TDGAYSSNMKQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMS 1529

Query: 2999 KVVVASDCLSLVNALSVNLDNLSWTNSILV---HDILKLVESFSSVIFVYIPRFCNTASH 3169
            ++ + +D + L  A+  N  NLS    +++   H IL    SFS     Y PR CN  +H
Sbjct: 1530 RIELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFS---VSYSPRSCNKVAH 1586

Query: 3170 HLAAWGFLFGHNFWTEDVPPISKSLIAND 3256
             LAA+G            PP  + L+++D
Sbjct: 1587 ELAAYGCNLQTVSSWAGCPPGLERLVSSD 1615