BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011645
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vin...   304   3e-80
ref|XP_002520109.1| nucleic acid binding protein, putative [Rici...   290   6e-76
ref|XP_003519023.1| PREDICTED: uncharacterized protein LOC100805...   288   2e-75
gb|AFK43947.1| unknown [Lotus japonicus]                              283   4e-74
gb|AFX67041.1| RNA recognition motif containing protein [Solanum...   278   2e-72

>ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vinifera]
           gi|225425750|ref|XP_002276661.1| PREDICTED: protein vip1
           isoform 2 [Vitis vinifera]
           gi|359473262|ref|XP_003631279.1| PREDICTED: protein vip1
           [Vitis vinifera]
          Length = 246

 Score =  304 bits (778), Expect = 3e-80
 Identities = 158/243 (65%), Positives = 179/243 (73%), Gaps = 5/243 (2%)
 Frame = +3

Query: 117 MSPTGYAAEVTGLSPNATEKDVYDFFAFSGSIEHVEIVRSG-EYACTAYVTFKDAYALEN 293
           MS +G+  EVT LSP  TEKDVYDFFAFSG+IE VE+VRS  E ACTAYVTFKDAYA+E 
Sbjct: 1   MSTSGHTIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRSADECACTAYVTFKDAYAVET 60

Query: 294 AVLLSGATIIDQRICITRWGQYEDEFDIWNRSSWKIEEETSSSHGVNGNPSIPTAGEAV- 470
           AVLLSGATI+DQR+CITRWG YEDEFD+WNR +WK+E+ETSS+H    N S P AGEAV 
Sbjct: 61  AVLLSGATIVDQRVCITRWGHYEDEFDLWNRPTWKLEDETSSTHAPETNRSYPDAGEAVT 120

Query: 471 ---EVVKSMLSKGYVLGKDALSKAKALDESHQVSATAAEKVSEMSKRIGFTDKISAGVGA 641
              EVVK+ML+KGY+LGKDALSKAK  DESHQ SATA   V+E+S+RIG TDK  AGV A
Sbjct: 121 MAQEVVKTMLAKGYILGKDALSKAKTFDESHQFSATAVATVAELSQRIGLTDKFCAGVEA 180

Query: 642 VMSVDEKYGVSETTKSAVSATGRTXXXXXXXXXXXXYFSMGALWVSXXXXXXXXXXXXXG 821
             SVD++Y +SE TKSAVSATGRT            YFS GALWVS             G
Sbjct: 181 AKSVDQRYHISEITKSAVSATGRTAAAAATTVVNSSYFSKGALWVSDALSRAAKAAGDLG 240

Query: 822 SHG 830
           SHG
Sbjct: 241 SHG 243


>ref|XP_002520109.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540601|gb|EEF42164.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 245

 Score =  290 bits (741), Expect = 6e-76
 Identities = 146/225 (64%), Positives = 176/225 (78%), Gaps = 4/225 (1%)
 Frame = +3

Query: 117 MSPTGYAAEVTGLSPNATEKDVYDFFAFSGSIEHVEIVRSGEYACTAYVTFKDAYALENA 296
           M   G+A EVTGLSP+ TEKD+YDFF+FSGSIEHVEIVR G+YACTAYVTFK+AY+ E A
Sbjct: 1   MDQDGHAVEVTGLSPSTTEKDLYDFFSFSGSIEHVEIVRCGDYACTAYVTFKNAYSQETA 60

Query: 297 VLLSGATIIDQRICITRWGQYEDEFDIWNRSSWKIEEETSSSHGVNGNPSIPTAGEAV-- 470
           VLLSGATI+++R+CITRWG Y DEFD+WN  S ++E+E  S+H    +  +P+AGEAV  
Sbjct: 61  VLLSGATILEERVCITRWGHYIDEFDLWNTPSLRVEDERESTHPPERSQYVPSAGEAVIM 120

Query: 471 --EVVKSMLSKGYVLGKDALSKAKALDESHQVSATAAEKVSEMSKRIGFTDKISAGVGAV 644
             EVVK+M++KGYVLGKD LSKAKA DESHQV+ATAA KV+E ++RIG  DKI AG+ A+
Sbjct: 121 AQEVVKNMVAKGYVLGKDTLSKAKAFDESHQVTATAAAKVAEFTERIGLADKIFAGMEAM 180

Query: 645 MSVDEKYGVSETTKSAVSATGRTXXXXXXXXXXXXYFSMGALWVS 779
            SVD+KY VS+ TKSAVSATGRT            YFS GALWVS
Sbjct: 181 KSVDQKYHVSDMTKSAVSATGRTAVAAASTVVNSSYFSKGALWVS 225


>ref|XP_003519023.1| PREDICTED: uncharacterized protein LOC100805907 [Glycine max]
          Length = 244

 Score =  288 bits (737), Expect = 2e-75
 Identities = 151/241 (62%), Positives = 177/241 (73%), Gaps = 4/241 (1%)
 Frame = +3

Query: 117 MSPTGYAAEVTGLSPNATEKDVYDFFAFSGSIEHVEIVRSGEYACTAYVTFKDAYALENA 296
           M+  GYA EVTGLSP AT+KDV DFFAFSG IE+VEI+RSG+YACTAYVTFKDAYA E A
Sbjct: 1   MNSGGYAVEVTGLSPKATDKDVRDFFAFSGVIENVEIIRSGDYACTAYVTFKDAYAQETA 60

Query: 297 VLLSGATIIDQRICITRWGQYEDEFDIWNRSSWKIEEETSSSHGVNGNPSIPTAGEAV-- 470
            LLSGATI+DQR+CITRWG YEDEFD WN+ S+  E+ET+S+     N  + +AGEAV  
Sbjct: 61  CLLSGATILDQRVCITRWGHYEDEFDFWNQPSYSHEDETAST-TPQSNQFVSSAGEAVTM 119

Query: 471 --EVVKSMLSKGYVLGKDALSKAKALDESHQVSATAAEKVSEMSKRIGFTDKISAGVGAV 644
             EVV++MLSKGYVL KDAL+KAK  DESHQVSATA  KVSE+S+RIG +DKISAG+GAV
Sbjct: 120 AQEVVRTMLSKGYVLSKDALAKAKDFDESHQVSATATAKVSELSQRIGLSDKISAGIGAV 179

Query: 645 MSVDEKYGVSETTKSAVSATGRTXXXXXXXXXXXXYFSMGALWVSXXXXXXXXXXXXXGS 824
            SVD++Y VSETT +A S  GR+            YFS GALWVS             G+
Sbjct: 180 KSVDQRYNVSETTMAAASTAGRSVAAAANSLVNSSYFSKGALWVSGALTRAAQVASDMGT 239

Query: 825 H 827
           H
Sbjct: 240 H 240


>gb|AFK43947.1| unknown [Lotus japonicus]
          Length = 245

 Score =  283 bits (725), Expect = 4e-74
 Identities = 147/240 (61%), Positives = 176/240 (73%), Gaps = 4/240 (1%)
 Frame = +3

Query: 129 GYAAEVTGLSPNATEKDVYDFFAFSGSIEHVEIVRSGEYACTAYVTFKDAYALENAVLLS 308
           GY  EVTGLSPNATEKDV+DFF+FSG+I+HVEI+RSG+YACTAYVTFKDAY+ E A LLS
Sbjct: 6   GYTVEVTGLSPNATEKDVHDFFSFSGAIQHVEIIRSGDYACTAYVTFKDAYSQETACLLS 65

Query: 309 GATIIDQRICITRWGQYEDEFDIWNRSSWKIEEETSSSHGVNGNPSIPTAGEAV----EV 476
           GATI+DQR+CITRWG YED +D WNR S+  EEE +S+   + N  + +AGEAV    EV
Sbjct: 66  GATILDQRVCITRWGNYEDAYDFWNRPSYSHEEERTST-TPHSNQFVSSAGEAVTVAQEV 124

Query: 477 VKSMLSKGYVLGKDALSKAKALDESHQVSATAAEKVSEMSKRIGFTDKISAGVGAVMSVD 656
           VK+ML+KGYVL KDAL+KAK  DESHQVSATA  KVSE+S+RIG ++K+SAGV AV  VD
Sbjct: 125 VKTMLAKGYVLSKDALTKAKDFDESHQVSATATAKVSELSRRIGLSEKVSAGVKAVKYVD 184

Query: 657 EKYGVSETTKSAVSATGRTXXXXXXXXXXXXYFSMGALWVSXXXXXXXXXXXXXGSHGSK 836
           + Y VS TTK+A SATGR+            YFS GALWVS             G+ G +
Sbjct: 185 QMYNVSGTTKAAASATGRSVASATSTVVNNSYFSKGALWVSGALTRAAQVTSDLGTRGGR 244


>gb|AFX67041.1| RNA recognition motif containing protein [Solanum tuberosum]
          Length = 245

 Score =  278 bits (711), Expect = 2e-72
 Identities = 143/242 (59%), Positives = 173/242 (71%), Gaps = 4/242 (1%)
 Frame = +3

Query: 117 MSPTGYAAEVTGLSPNATEKDVYDFFAFSGSIEHVEIVRSGEYACTAYVTFKDAYALENA 296
           M+P GY AEVTGLSP ATEKDV +FF F G+IEHVEIVR+GE+A TAYVTF++ +ALE A
Sbjct: 1   MNPGGYTAEVTGLSPTATEKDVQEFFGFCGAIEHVEIVRAGEHASTAYVTFRNPHALETA 60

Query: 297 VLLSGATIIDQRICITRWGQYEDEFDIWNRSSWKIEEETSSSHGVNGNPSIPTAGEAV-- 470
           VLLSGA I+DQR+CIT WG Y+DEFD WN SSWK +E+  SS    G+  + +AGEAV  
Sbjct: 61  VLLSGAAILDQRVCITSWGHYQDEFDYWNHSSWKPQEDCYSSQDSQGHYFVSSAGEAVTL 120

Query: 471 --EVVKSMLSKGYVLGKDALSKAKALDESHQVSATAAEKVSEMSKRIGFTDKISAGVGAV 644
             +VVK+MLS+GYVLGK AL KAKA DESH +SATA  KV+++S+RIG TDK  AGV   
Sbjct: 121 TQDVVKTMLSQGYVLGKGALGKAKAFDESHGLSATAVSKVADLSERIGLTDKFCAGVEVA 180

Query: 645 MSVDEKYGVSETTKSAVSATGRTXXXXXXXXXXXXYFSMGALWVSXXXXXXXXXXXXXGS 824
            SVD++Y +S+TT+SAVSATGRT            YFS GALW+S             GS
Sbjct: 181 RSVDQRYHISDTTRSAVSATGRTAISAATAVVNSSYFSKGALWMSGALSKAAQAAADLGS 240

Query: 825 HG 830
            G
Sbjct: 241 RG 242