BLASTX nr result

ID: Coptis24_contig00011643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011643
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|2...   341   1e-91
ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, put...   337   3e-90
ref|NP_001240971.1| uncharacterized protein LOC100820362 [Glycin...   325   1e-86
ref|XP_003526588.1| PREDICTED: LOW QUALITY PROTEIN: ser/Thr-rich...   324   1e-86
ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR ...   320   3e-85

>ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|222856428|gb|EEE93975.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  341 bits (875), Expect = 1e-91
 Identities = 158/230 (68%), Positives = 193/230 (83%)
 Frame = -1

Query: 857 PVSWWEGCEILGGRDEVAGGTWLACTREGKFAFVTNVLESRTLPEARSRGDLPVRFLESK 678
           PV+WW+G EILGGRD VAGGTWLAC+R G+ AF+TNVLE    PEA+SRG+LPV FLES 
Sbjct: 28  PVAWWDGSEILGGRDAVAGGTWLACSRTGRVAFITNVLELHPFPEAKSRGELPVLFLEST 87

Query: 677 KSPKEFAEEVMKEADQYNGFNLILADISAKTMIYISNRPKGELISIKEVSPGIHVLTNAK 498
           KSPKEFAE ++K+A QYNGFNLILADIS+K+M+Y+SNRP+GE + I+EVSPG+HVL+NAK
Sbjct: 88  KSPKEFAEGLVKDAHQYNGFNLILADISSKSMVYLSNRPEGEPVVIQEVSPGLHVLSNAK 147

Query: 497 LDSPWHKALRLHRNFNELFGIYGEDEIPLNELVEELMKDTVKADRNRLPNICSPDWEIHL 318
           LDSPWHK  RL  N  +L G YGE EIP+ E++E+LM+D VKAD++RLP ICS DWE +L
Sbjct: 148 LDSPWHKVQRLGLNLKDLLGKYGESEIPVKEVLEKLMRDKVKADKSRLPGICSIDWEFNL 207

Query: 317 SSIFVQVDTPLGCYGTRSTIAISVKASGEVSFYEKYIENESWKEHTVTYQ 168
           SSIFV++DTPLGCYGTRST A+++ A GEVSFYE Y+E   WKE TV Y+
Sbjct: 208 SSIFVEIDTPLGCYGTRSTAALTIGAGGEVSFYEIYLEKNVWKESTVNYR 257


>ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, putative [Ricinus
           communis] gi|223551385|gb|EEF52871.1| Ser/Thr-rich
           protein T10 in DGCR region, putative [Ricinus communis]
          Length = 248

 Score =  337 bits (863), Expect = 3e-90
 Identities = 159/231 (68%), Positives = 194/231 (83%), Gaps = 1/231 (0%)
 Frame = -1

Query: 857 PVSWWEGCEILGGRDEVAGGTWLACTREGKFAFVTNVLESRTLPEARSRGDLPVRFLESK 678
           PV+WW+GC++LGGRD VAGGTWL C+R G+ AF+TNVLE   LPEARSRG+LPV FLES 
Sbjct: 11  PVAWWDGCDVLGGRDAVAGGTWLGCSRSGRVAFLTNVLELHALPEARSRGELPVLFLESP 70

Query: 677 KSPKEFAEEVMKEADQYNGFNLILADISAKTMIYISNRPKGELISIKEVSPGIHVLTNAK 498
           KSPKEFAE ++KEA QYNGFNLILADIS+K+M+YISNRPKGE + ++EVSPGIHVL+NAK
Sbjct: 71  KSPKEFAEMLVKEAHQYNGFNLILADISSKSMVYISNRPKGEPVVVQEVSPGIHVLSNAK 130

Query: 497 LDSPWHKALRLHRNFNELFGIY-GEDEIPLNELVEELMKDTVKADRNRLPNICSPDWEIH 321
           LDSPW K  RL  NF E    Y GEDEIP+  ++E+LM+DTV+A+++ LP ICS DWE +
Sbjct: 131 LDSPWPKVQRLKLNFKEQLDTYGGEDEIPVEGMLEKLMRDTVRAEKSGLPGICSLDWEHN 190

Query: 320 LSSIFVQVDTPLGCYGTRSTIAISVKASGEVSFYEKYIENESWKEHTVTYQ 168
           LSSIFV+V TPLGCYGTRST A++V+A+GEVSFYE Y+E+  WKE TV Y+
Sbjct: 191 LSSIFVEVHTPLGCYGTRSTTALTVRANGEVSFYETYLEDNIWKEKTVNYR 241


>ref|NP_001240971.1| uncharacterized protein LOC100820362 [Glycine max]
           gi|255635670|gb|ACU18184.1| unknown [Glycine max]
          Length = 273

 Score =  325 bits (832), Expect = 1e-86
 Identities = 149/230 (64%), Positives = 189/230 (82%)
 Frame = -1

Query: 857 PVSWWEGCEILGGRDEVAGGTWLACTREGKFAFVTNVLESRTLPEARSRGDLPVRFLESK 678
           PVSWWE C+IL GRDE+A GTWLAC+ +G+ AF+TNVLE  TLPEA+SRGDLPV FL+S 
Sbjct: 32  PVSWWEDCDILAGRDEIAMGTWLACSTQGRVAFLTNVLELHTLPEAKSRGDLPVLFLKSS 91

Query: 677 KSPKEFAEEVMKEADQYNGFNLILADISAKTMIYISNRPKGELISIKEVSPGIHVLTNAK 498
           K PKEFAE +  EA  YNGFNLI+ADI + +M+YISNRPKG+ I+I+EV PG+HVL+N K
Sbjct: 92  KKPKEFAESLKSEAHYYNGFNLIVADIVSNSMVYISNRPKGQPITIQEVPPGLHVLSNDK 151

Query: 497 LDSPWHKALRLHRNFNELFGIYGEDEIPLNELVEELMKDTVKADRNRLPNICSPDWEIHL 318
           LDSPWHKALRL  +F E    +GE EIP+ E++++LMKDTVKAD+N LP ICS DWE +L
Sbjct: 152 LDSPWHKALRLEFSFKEHVAKHGEGEIPVKEVIQKLMKDTVKADKNSLPRICSLDWEFNL 211

Query: 317 SSIFVQVDTPLGCYGTRSTIAISVKASGEVSFYEKYIENESWKEHTVTYQ 168
           SSIFV+V+TPLG YGTRS+ A++V++SGE SFYE Y+++  WKEH + ++
Sbjct: 212 SSIFVEVETPLGLYGTRSSAALTVRSSGEASFYEVYLDDTKWKEHVIDFR 261


>ref|XP_003526588.1| PREDICTED: LOW QUALITY PROTEIN: ser/Thr-rich protein T10 in DGCR
           region-like [Glycine max]
          Length = 275

 Score =  324 bits (831), Expect = 1e-86
 Identities = 147/229 (64%), Positives = 188/229 (82%)
 Frame = -1

Query: 857 PVSWWEGCEILGGRDEVAGGTWLACTREGKFAFVTNVLESRTLPEARSRGDLPVRFLESK 678
           PVSWWE C+IL GRDE+A GTWLAC+ +G+ AF+TNVLE  TLPEA+SRGDLPV FL+S 
Sbjct: 32  PVSWWEDCDILAGRDEIAMGTWLACSTQGRVAFLTNVLELHTLPEAKSRGDLPVLFLKSS 91

Query: 677 KSPKEFAEEVMKEADQYNGFNLILADISAKTMIYISNRPKGELISIKEVSPGIHVLTNAK 498
           K PKEFAE +  EA  YNGFN+++ADI +K+M+YISNRPKG+ I+IKEV PG+HVL+N K
Sbjct: 92  KKPKEFAESLKLEAHYYNGFNIVVADIVSKSMVYISNRPKGQPITIKEVPPGLHVLSNDK 151

Query: 497 LDSPWHKALRLHRNFNELFGIYGEDEIPLNELVEELMKDTVKADRNRLPNICSPDWEIHL 318
           LDSPWHKALRL  +F E    YGE EIP+ E++++LMKD VKAD++ LP ICSPDWE +L
Sbjct: 152 LDSPWHKALRLEFSFKEHVAKYGEGEIPVKEVIQKLMKDKVKADKSSLPRICSPDWEFNL 211

Query: 317 SSIFVQVDTPLGCYGTRSTIAISVKASGEVSFYEKYIENESWKEHTVTY 171
           SSIFV+V+TPLG YGTRS+ A++V++ GE +FYE Y+++  WKEH + +
Sbjct: 212 SSIFVEVETPLGLYGTRSSAALTVRSRGEANFYEVYLDDTKWKEHAIDF 260


>ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR region-like [Vitis
           vinifera] gi|297744476|emb|CBI37738.3| unnamed protein
           product [Vitis vinifera]
          Length = 272

 Score =  320 bits (819), Expect = 3e-85
 Identities = 154/229 (67%), Positives = 188/229 (82%)
 Frame = -1

Query: 854 VSWWEGCEILGGRDEVAGGTWLACTREGKFAFVTNVLESRTLPEARSRGDLPVRFLESKK 675
           ++WW+G EILGGRD +AGGTWLAC+R+G+ AF+TNV E   +PEA+SRGDL VRFLESKK
Sbjct: 33  LAWWQGGEILGGRDGLAGGTWLACSRDGRLAFLTNVREVHPIPEAKSRGDLIVRFLESKK 92

Query: 674 SPKEFAEEVMKEADQYNGFNLILADISAKTMIYISNRPKGELISIKEVSPGIHVLTNAKL 495
           +P EFAEEVMKEAD+YNGFNLI+AD+ +KTMIYI+NRP+   +S+ EVSPGIHVL+NA L
Sbjct: 93  NPMEFAEEVMKEADKYNGFNLIIADLCSKTMIYITNRPREANVSVVEVSPGIHVLSNASL 152

Query: 494 DSPWHKALRLHRNFNELFGIYGEDEIPLNELVEELMKDTVKADRNRLPNICSPDWEIHLS 315
           DSPW KA RL  NF EL   YGE EIP  E+VE+LMK+T+K D   LP I  P+ E  LS
Sbjct: 153 DSPWPKARRLGHNFKELLDKYGEGEIPTEEMVEKLMKNTIKDDEIVLPRIYPPEREHQLS 212

Query: 314 SIFVQVDTPLGCYGTRSTIAISVKASGEVSFYEKYIENESWKEHTVTYQ 168
           SIFV  DTPLG YGTRST ++ V+ASGEV+FYEK++ENE+W+E+TVTYQ
Sbjct: 213 SIFVDTDTPLGRYGTRSTSSVCVRASGEVNFYEKHLENETWRENTVTYQ 261


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