BLASTX nr result

ID: Coptis24_contig00011641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011641
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626838.1| 70 kDa peptidyl-prolyl isomerase [Medicago t...    61   1e-07
ref|XP_003596743.1| HAT family dimerization domain containing pr...    60   3e-07
ref|XP_002443211.1| hypothetical protein SORBIDRAFT_08g015460 [S...    58   1e-06
ref|XP_002443435.1| hypothetical protein SORBIDRAFT_08g019436 [S...    57   2e-06
ref|XP_002447931.1| hypothetical protein SORBIDRAFT_06g018328 [S...    55   6e-06

>ref|XP_003626838.1| 70 kDa peptidyl-prolyl isomerase [Medicago truncatula]
           gi|355520860|gb|AET01314.1| 70 kDa peptidyl-prolyl
           isomerase [Medicago truncatula]
          Length = 776

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = -3

Query: 557 FSHIHTLKRNRMDSERVDSLVFVHSNLRLLSRSGDEYKTGPSKSCD 420
           FS IH+LKRN+MD +RV+ LV+VH+NLR+LSR  D YK G S+  D
Sbjct: 524 FSFIHSLKRNKMDRKRVEDLVYVHTNLRILSRKEDGYKKGQSRMWD 569


>ref|XP_003596743.1| HAT family dimerization domain containing protein [Medicago
           truncatula] gi|355485791|gb|AES66994.1| HAT family
           dimerization domain containing protein [Medicago
           truncatula]
          Length = 292

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 557 FSHIHTLKRNRMDSERVDSLVFVHSNLRLLSRSGDEYKTGPSK 429
           FS IH+LKRN+MD +RV+ LV+VH NLRLLSR  D YK G S+
Sbjct: 249 FSFIHSLKRNKMDPKRVEDLVYVHINLRLLSRKEDGYKKGQSR 291


>ref|XP_002443211.1| hypothetical protein SORBIDRAFT_08g015460 [Sorghum bicolor]
           gi|241943904|gb|EES17049.1| hypothetical protein
           SORBIDRAFT_08g015460 [Sorghum bicolor]
          Length = 698

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 7/56 (12%)
 Frame = -3

Query: 557 FSHIHTLKRNRMDSERVDSLVFVHSNLRLLSRSGDEYKTGPSK-------SCDSLG 411
           +S IH++KRN +  ER + LVFVH+NLR LSR GD YKTG ++       S DSLG
Sbjct: 562 YSFIHSVKRNALTPERAEDLVFVHTNLRHLSRRGDAYKTGETRMWDVGGDSFDSLG 617


>ref|XP_002443435.1| hypothetical protein SORBIDRAFT_08g019436 [Sorghum bicolor]
           gi|241944128|gb|EES17273.1| hypothetical protein
           SORBIDRAFT_08g019436 [Sorghum bicolor]
          Length = 246

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 7/56 (12%)
 Frame = -3

Query: 557 FSHIHTLKRNRMDSERVDSLVFVHSNLRLLSRSGDEYKTGPSK-------SCDSLG 411
           +S IH+LKRN +  ER + LVFVH+NLR LSR  D YKTG ++       S DSLG
Sbjct: 150 YSFIHSLKRNALTPERAEDLVFVHTNLRHLSRKSDAYKTGETRMWDVGGDSFDSLG 205


>ref|XP_002447931.1| hypothetical protein SORBIDRAFT_06g018328 [Sorghum bicolor]
           gi|241939114|gb|EES12259.1| hypothetical protein
           SORBIDRAFT_06g018328 [Sorghum bicolor]
          Length = 219

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 7/56 (12%)
 Frame = -3

Query: 557 FSHIHTLKRNRMDSERVDSLVFVHSNLRLLSRSGDEYKTGPSK-------SCDSLG 411
           +S IH++KRN +  ER + LVFVH+NLR LSR  D YKTG ++       S DSLG
Sbjct: 123 YSFIHSVKRNALTPERAEDLVFVHTNLRHLSRRSDAYKTGETRMWDVGGDSFDSLG 178


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