BLASTX nr result

ID: Coptis24_contig00011640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011640
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526057.1| conserved hypothetical protein [Ricinus comm...   141   6e-32
ref|XP_004140194.1| PREDICTED: crt homolog 2-like [Cucumis sativ...   139   3e-31
ref|XP_003545164.1| PREDICTED: crt homolog 1-like [Glycine max]       135   3e-30
ref|XP_002313263.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_003556785.1| PREDICTED: crt homolog 1-like [Glycine max]       129   2e-28

>ref|XP_002526057.1| conserved hypothetical protein [Ricinus communis]
           gi|223534638|gb|EEF36334.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 280

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/108 (67%), Positives = 81/108 (75%)
 Frame = -2

Query: 324 DRERKVEVLVAAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRY 145
           ++  K+EV VAA+ATV+LGVGNRVLYKLALVPLKHYPFFLAQLATFGYV+VYF+ILY RY
Sbjct: 94  EKNHKLEVAVAASATVVLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVIVYFTILYIRY 153

Query: 144 HAGIVTDEMLSMPKAPFXXXXXXXXXXXXXXXXXXXXXXGTSIPILSQ 1
           HAGIVTDEMLSMPKAP+                      G SIPILSQ
Sbjct: 154 HAGIVTDEMLSMPKAPYLLVGLLEALAAATGMAAAAILSGASIPILSQ 201


>ref|XP_004140194.1| PREDICTED: crt homolog 2-like [Cucumis sativus]
           gi|449480984|ref|XP_004156047.1| PREDICTED: crt homolog
           2-like [Cucumis sativus]
          Length = 459

 Score =  139 bits (349), Expect = 3e-31
 Identities = 72/106 (67%), Positives = 79/106 (74%)
 Frame = -2

Query: 318 ERKVEVLVAAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHA 139
           +RKVE++VAAA+TVI GV NRVLYKLALVPLKHYPFFLAQLATFGYV+VYFSILY RYHA
Sbjct: 112 DRKVEIVVAAASTVIFGVANRVLYKLALVPLKHYPFFLAQLATFGYVIVYFSILYLRYHA 171

Query: 138 GIVTDEMLSMPKAPFXXXXXXXXXXXXXXXXXXXXXXGTSIPILSQ 1
           GIVTDEMLS PKAP+                      G SIP+LSQ
Sbjct: 172 GIVTDEMLSTPKAPYIVAGLLEALGAATGMAAAAILSGASIPVLSQ 217


>ref|XP_003545164.1| PREDICTED: crt homolog 1-like [Glycine max]
          Length = 438

 Score =  135 bits (340), Expect = 3e-30
 Identities = 72/107 (67%), Positives = 76/107 (71%)
 Frame = -2

Query: 321 RERKVEVLVAAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYH 142
           R R VEV  AA ATV+LGVGNRVLYKLALVPLKHYPFFLAQLATFGYV+VYF+ILY R+H
Sbjct: 90  RNRVVEVAAAAVATVVLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVIVYFAILYIRHH 149

Query: 141 AGIVTDEMLSMPKAPFXXXXXXXXXXXXXXXXXXXXXXGTSIPILSQ 1
           AGIVTDEML  PKAPF                      G SIPILSQ
Sbjct: 150 AGIVTDEMLDAPKAPFIVVGLLEALAAATGMAAGAILSGASIPILSQ 196


>ref|XP_002313263.1| predicted protein [Populus trichocarpa] gi|222849671|gb|EEE87218.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  132 bits (333), Expect = 2e-29
 Identities = 70/106 (66%), Positives = 78/106 (73%)
 Frame = -2

Query: 318 ERKVEVLVAAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHA 139
           +R VEV VAAA TV+LGVGNRVLYKLAL+PLKHYPFFLAQLATFGYV+VYF+IL+ R+ A
Sbjct: 118 DRAVEVAVAAAVTVVLGVGNRVLYKLALLPLKHYPFFLAQLATFGYVIVYFTILHIRHRA 177

Query: 138 GIVTDEMLSMPKAPFXXXXXXXXXXXXXXXXXXXXXXGTSIPILSQ 1
           GIVTDEMLSMPKAP+                      G SIPILSQ
Sbjct: 178 GIVTDEMLSMPKAPYILVGLLEALGAATGMAAGAILSGASIPILSQ 223


>ref|XP_003556785.1| PREDICTED: crt homolog 1-like [Glycine max]
          Length = 428

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/105 (64%), Positives = 75/105 (71%)
 Frame = -2

Query: 315 RKVEVLVAAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHAG 136
           R  EV++AAA TV++G GNRVLYKLALVPLK+YPFFLAQLATFGYV+VYFSILY RY AG
Sbjct: 87  RSAEVVLAAAVTVVMGAGNRVLYKLALVPLKNYPFFLAQLATFGYVIVYFSILYIRYRAG 146

Query: 135 IVTDEMLSMPKAPFXXXXXXXXXXXXXXXXXXXXXXGTSIPILSQ 1
           IVTDEMLS+PK PF                      G SIPILSQ
Sbjct: 147 IVTDEMLSVPKTPFLVVGLLEALGAATGMAAGAMLSGASIPILSQ 191


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