BLASTX nr result
ID: Coptis24_contig00011638
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011638
(1784 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635314.1| PREDICTED: probable ADP-ribosylation factor ... 157 2e-79
ref|XP_003596474.1| Arf-GAP with coiled-coil, ANK repeat and PH ... 157 3e-76
ref|XP_003596475.1| Arf-GAP with coiled-coil, ANK repeat and PH ... 157 3e-76
ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor ... 238 4e-60
ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor ... 238 4e-60
>ref|XP_003635314.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
AGD5-like [Vitis vinifera] gi|302144235|emb|CBI23473.3|
unnamed protein product [Vitis vinifera]
Length = 507
Score = 157 bits (398), Expect(3) = 2e-79
Identities = 110/312 (35%), Positives = 149/312 (47%), Gaps = 34/312 (10%)
Frame = -3
Query: 1218 EPIVQNESTTKEVANST-LAPPPKIDYATDLFNMLSMGGPSENGSEASSADDNAWAGFQX 1042
E + K+ A +T + PP++DYATDLF MLS+ EN SE S+A+ + GFQ
Sbjct: 208 ESSISKAEPVKQAATATPIVSPPRVDYATDLFRMLSVKDSRENDSEISAANGVS-TGFQS 266
Query: 1041 XXXXXXXXXXXXXKQTETESKIPSASGLEDLFKDSPAVMPSAVLGQQPQKDLKSDIMSLF 862
ES I S +G+EDLFKD V P + ++PQKD+K+DIM+LF
Sbjct: 267 AEASSTVEKSTP--SNPVESNIQSKTGIEDLFKDLTLVTPPIL--EKPQKDMKNDIMNLF 322
Query: 861 EKSKMASPFSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTQQSGSNGIYALGGSLP 682
EKS M SPFS+H S Q G+NG++ L
Sbjct: 323 EKSSMVSPFSIHQQQVAMLAQQQSFLMAAAARSNGSHTFSG-SIHQPGTNGVH-----LS 376
Query: 681 NQNWLNVGYQAPGGRMPVAGQNELQMQMGNVRPSNSSGIYVPF----------------- 553
QNW N+G+Q PG PV + + MQMGN+RP++ SG VP
Sbjct: 377 TQNWGNIGHQRPGVLTPVT-EPQKHMQMGNIRPTHWSGTNVPLPTHSLGTNGPLPAHSSG 435
Query: 552 ----------------QTPSIYNMETVAPVNGIASGSGVSRPPAMPPASSLTPTRTETDF 421
T S+YNM P+NG+ +G R P+ P SS+ ++ D+
Sbjct: 436 TNVPLPARSLGTNVPCPTSSMYNMSPAHPINGVTM-TGAGRLPSALPNSSVILPKSGNDY 494
Query: 420 DFSSLTQGMFSK 385
DFSSLTQGMF+K
Sbjct: 495 DFSSLTQGMFTK 506
Score = 117 bits (293), Expect(3) = 2e-79
Identities = 54/56 (96%), Positives = 55/56 (98%)
Frame = -3
Query: 1782 VRSATLDTWLPEQVAFIQSMGNEKSNIYWEAELPPNYDRVGIENFIRAKYEEKRWV 1615
VRSATLDTWLP+QVAFIQSMGNEKSN YWEAELPPNYDRVGIENFIRAKYEEKRWV
Sbjct: 68 VRSATLDTWLPDQVAFIQSMGNEKSNSYWEAELPPNYDRVGIENFIRAKYEEKRWV 123
Score = 70.9 bits (172), Expect(3) = 2e-79
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -1
Query: 1562 YEEKRWVPRDGRQKSPSKAFEERSSVHSQRPGDRGGNGPTNVAVHASGERRNLPPPTKTS 1383
YEEKRWVPRDG+ S S+ ++++S + RPG G + TN H+S ++ PP T +S
Sbjct: 117 YEEKRWVPRDGKAISHSRESQQKASAYRPRPGGSGAHRYTNNVEHSSDKKNIHPPNTNSS 176
Query: 1382 IPARNISVPAPSKV 1341
IPA +PA SKV
Sbjct: 177 IPASKSRIPAASKV 190
>ref|XP_003596474.1| Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
[Medicago truncatula] gi|355485522|gb|AES66725.1| Arf-GAP
with coiled-coil, ANK repeat and PH domain-containing
protein [Medicago truncatula]
Length = 474
Score = 157 bits (397), Expect(3) = 3e-76
Identities = 110/284 (38%), Positives = 149/284 (52%), Gaps = 6/284 (2%)
Frame = -3
Query: 1218 EPIV--QNESTTKEVANSTLAPPPKIDYATDLFNMLSMGGPSENGSEA--SSADDNAWAG 1051
EP+ Q T+K ++ + PPK+DYATDLFN+LSM +ENGS+A ++ADD WAG
Sbjct: 205 EPVASQQQPETSKPNTDTAQSTPPKVDYATDLFNLLSMDDTNENGSKAPGATADDINWAG 264
Query: 1050 FQXXXXXXXXXXXXXXKQTETESKIPSASGLEDLFKDSPAVMPSAVLGQQPQKDLKSDIM 871
FQ ES SA G+EDLFKDS +V PS + +PQKD+K+DIM
Sbjct: 265 FQ--SAAEMSTAEKTGPPNAVESTPLSAPGVEDLFKDSFSVTPS-LTPVKPQKDVKNDIM 321
Query: 870 SLFEKSKMASPFSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTQQSGSNGIYALGG 691
SLFEKS + SPFS+H P QQ N
Sbjct: 322 SLFEKSNIVSPFSMHQQQLAMLAQQQSLLMAAAAKSTGVDLKYPTGMQQPSPN------- 374
Query: 690 SLPNQNWLNVGYQAPGGRMPVAGQNELQ--MQMGNVRPSNSSGIYVPFQTPSIYNMETVA 517
+ QNW G+ G +P+ Q ELQ MQ N+ P+ +G V + Y M V
Sbjct: 375 -VSVQNWPATGFPT-SGVVPIGVQGELQNHMQTRNMTPAYPAGNSVQYPPSGFYGMGQVG 432
Query: 516 PVNGIASGSGVSRPPAMPPASSLTPTRTETDFDFSSLTQGMFSK 385
PVNG+ + GV++P + P +S T +++ ++DFSSLTQGMF+K
Sbjct: 433 PVNGMMT-VGVNKPQSTPASS--TASKSAKEYDFSSLTQGMFAK 473
Score = 113 bits (283), Expect(3) = 3e-76
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = -3
Query: 1782 VRSATLDTWLPEQVAFIQSMGNEKSNIYWEAELPPNYDRVGIENFIRAKYEEKRWV 1615
VRSATLDTWLPEQVAFIQSMGNEK+N YWEAELPP+YDRVG+ENFIRAKYE+KRWV
Sbjct: 68 VRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPHYDRVGLENFIRAKYEDKRWV 123
Score = 64.3 bits (155), Expect(3) = 3e-76
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = -1
Query: 1562 YEEKRWVPRDGRQKSPSKAFEERSSVHSQRPGDRGGNGPTNVAVHASGERRNLPPPTKTS 1383
YE+KRWV RDG K+PS E++S H Q P + G+G VA + ER+ + P +
Sbjct: 117 YEDKRWVSRDGHPKTPSGLREDKSPSHRQMPAENSGHGYATVAENTFEERKKIQP--SNA 174
Query: 1382 IPARNISVPAPSKV 1341
+PA VPAP KV
Sbjct: 175 VPATRRRVPAPRKV 188
>ref|XP_003596475.1| Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
[Medicago truncatula] gi|355485523|gb|AES66726.1| Arf-GAP
with coiled-coil, ANK repeat and PH domain-containing
protein [Medicago truncatula]
Length = 423
Score = 157 bits (397), Expect(3) = 3e-76
Identities = 110/284 (38%), Positives = 149/284 (52%), Gaps = 6/284 (2%)
Frame = -3
Query: 1218 EPIV--QNESTTKEVANSTLAPPPKIDYATDLFNMLSMGGPSENGSEA--SSADDNAWAG 1051
EP+ Q T+K ++ + PPK+DYATDLFN+LSM +ENGS+A ++ADD WAG
Sbjct: 154 EPVASQQQPETSKPNTDTAQSTPPKVDYATDLFNLLSMDDTNENGSKAPGATADDINWAG 213
Query: 1050 FQXXXXXXXXXXXXXXKQTETESKIPSASGLEDLFKDSPAVMPSAVLGQQPQKDLKSDIM 871
FQ ES SA G+EDLFKDS +V PS + +PQKD+K+DIM
Sbjct: 214 FQ--SAAEMSTAEKTGPPNAVESTPLSAPGVEDLFKDSFSVTPS-LTPVKPQKDVKNDIM 270
Query: 870 SLFEKSKMASPFSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTQQSGSNGIYALGG 691
SLFEKS + SPFS+H P QQ N
Sbjct: 271 SLFEKSNIVSPFSMHQQQLAMLAQQQSLLMAAAAKSTGVDLKYPTGMQQPSPN------- 323
Query: 690 SLPNQNWLNVGYQAPGGRMPVAGQNELQ--MQMGNVRPSNSSGIYVPFQTPSIYNMETVA 517
+ QNW G+ G +P+ Q ELQ MQ N+ P+ +G V + Y M V
Sbjct: 324 -VSVQNWPATGFPT-SGVVPIGVQGELQNHMQTRNMTPAYPAGNSVQYPPSGFYGMGQVG 381
Query: 516 PVNGIASGSGVSRPPAMPPASSLTPTRTETDFDFSSLTQGMFSK 385
PVNG+ + GV++P + P +S T +++ ++DFSSLTQGMF+K
Sbjct: 382 PVNGMMT-VGVNKPQSTPASS--TASKSAKEYDFSSLTQGMFAK 422
Score = 113 bits (283), Expect(3) = 3e-76
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = -3
Query: 1782 VRSATLDTWLPEQVAFIQSMGNEKSNIYWEAELPPNYDRVGIENFIRAKYEEKRWV 1615
VRSATLDTWLPEQVAFIQSMGNEK+N YWEAELPP+YDRVG+ENFIRAKYE+KRWV
Sbjct: 17 VRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPHYDRVGLENFIRAKYEDKRWV 72
Score = 64.3 bits (155), Expect(3) = 3e-76
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = -1
Query: 1562 YEEKRWVPRDGRQKSPSKAFEERSSVHSQRPGDRGGNGPTNVAVHASGERRNLPPPTKTS 1383
YE+KRWV RDG K+PS E++S H Q P + G+G VA + ER+ + P +
Sbjct: 66 YEDKRWVSRDGHPKTPSGLREDKSPSHRQMPAENSGHGYATVAENTFEERKKIQP--SNA 123
Query: 1382 IPARNISVPAPSKV 1341
+PA VPAP KV
Sbjct: 124 VPATRRRVPAPRKV 137
>ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
AGD5-like isoform 1 [Vitis vinifera]
Length = 475
Score = 238 bits (607), Expect = 4e-60
Identities = 138/281 (49%), Positives = 172/281 (61%), Gaps = 3/281 (1%)
Frame = -3
Query: 1218 EPIVQNESTTKEVANST-LAPPPKIDYATDLFNMLSMGGPSENGSEASSADDNAWAGFQX 1042
EP V + K+ A+ST + PPPK+DYATDLFNMLSM P+ENGSEA+SADDNAWAGFQ
Sbjct: 206 EPSVPQAESAKQAADSTPVVPPPKVDYATDLFNMLSMDDPTENGSEAASADDNAWAGFQS 265
Query: 1041 XXXXXXXXXXXXXKQTETESKIPSASGLEDLFKDSPAVMPSAVLGQQPQKDLKSDIMSLF 862
K E ++ S SG+EDLFKDSP++MP+A +PQKD+K+DIMSLF
Sbjct: 266 AEQTSTAEKTAPAKPIEGNTQ--STSGIEDLFKDSPSIMPAA--SDKPQKDVKNDIMSLF 321
Query: 861 EKSKMASPFSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTQQSGSNGIYALGGSLP 682
EKS M SPFS+H ++ QQ SNG LP
Sbjct: 322 EKSNMVSPFSLHQQQLAMLAQQQSLLMAAAAKSTGVAPKFSINAQQHSSNGT-----DLP 376
Query: 681 NQNWLNVGYQAPGGRMPVAGQNELQ--MQMGNVRPSNSSGIYVPFQTPSIYNMETVAPVN 508
QNW N+GYQ PG M AG N++Q MQ N+ P++ +G VPF T S+Y M VAP N
Sbjct: 377 TQNWPNMGYQIPGMMMQAAGNNDMQKFMQAANMGPTHPAGNSVPFATSSMYTMGQVAPTN 436
Query: 507 GIASGSGVSRPPAMPPASSLTPTRTETDFDFSSLTQGMFSK 385
G+A+ S VSRPP+ PA+ PT+ ++DFSSLTQGMFSK
Sbjct: 437 GVATTS-VSRPPSASPAT--PPTQPGKEYDFSSLTQGMFSK 474
Score = 115 bits (289), Expect(2) = 2e-39
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = -3
Query: 1782 VRSATLDTWLPEQVAFIQSMGNEKSNIYWEAELPPNYDRVGIENFIRAKYEEKRWV 1615
VRSATLDTWLPEQVAFIQSMGNEK+N YWEAELPPNYDRVGIENFIRAKYE+KRW+
Sbjct: 68 VRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEDKRWI 123
Score = 75.1 bits (183), Expect(2) = 2e-39
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = -1
Query: 1562 YEEKRWVPRDGRQKSPSKAFEERSSVHSQRPGDRGGNGPTNVAVHASGERRNLPPPT-KT 1386
YE+KRW+P+DG+ +S S+ EE++S H RPGDRGG+G T+ + ++ E++N+ P+ K
Sbjct: 117 YEDKRWIPKDGKPRSTSQGREEKASAHWHRPGDRGGSGNTSNSENSFEEKKNVQAPSIKD 176
Query: 1385 SIPARNISVPAPSK 1344
+ PA IS+P P K
Sbjct: 177 NGPATRISLPVPPK 190
>ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
AGD5-like isoform 2 [Vitis vinifera]
gi|302143074|emb|CBI20369.3| unnamed protein product
[Vitis vinifera]
Length = 478
Score = 238 bits (607), Expect = 4e-60
Identities = 138/281 (49%), Positives = 172/281 (61%), Gaps = 3/281 (1%)
Frame = -3
Query: 1218 EPIVQNESTTKEVANST-LAPPPKIDYATDLFNMLSMGGPSENGSEASSADDNAWAGFQX 1042
EP V + K+ A+ST + PPPK+DYATDLFNMLSM P+ENGSEA+SADDNAWAGFQ
Sbjct: 209 EPSVPQAESAKQAADSTPVVPPPKVDYATDLFNMLSMDDPTENGSEAASADDNAWAGFQS 268
Query: 1041 XXXXXXXXXXXXXKQTETESKIPSASGLEDLFKDSPAVMPSAVLGQQPQKDLKSDIMSLF 862
K E ++ S SG+EDLFKDSP++MP+A +PQKD+K+DIMSLF
Sbjct: 269 AEQTSTAEKTAPAKPIEGNTQ--STSGIEDLFKDSPSIMPAA--SDKPQKDVKNDIMSLF 324
Query: 861 EKSKMASPFSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTQQSGSNGIYALGGSLP 682
EKS M SPFS+H ++ QQ SNG LP
Sbjct: 325 EKSNMVSPFSLHQQQLAMLAQQQSLLMAAAAKSTGVAPKFSINAQQHSSNGT-----DLP 379
Query: 681 NQNWLNVGYQAPGGRMPVAGQNELQ--MQMGNVRPSNSSGIYVPFQTPSIYNMETVAPVN 508
QNW N+GYQ PG M AG N++Q MQ N+ P++ +G VPF T S+Y M VAP N
Sbjct: 380 TQNWPNMGYQIPGMMMQAAGNNDMQKFMQAANMGPTHPAGNSVPFATSSMYTMGQVAPTN 439
Query: 507 GIASGSGVSRPPAMPPASSLTPTRTETDFDFSSLTQGMFSK 385
G+A+ S VSRPP+ PA+ PT+ ++DFSSLTQGMFSK
Sbjct: 440 GVATTS-VSRPPSASPAT--PPTQPGKEYDFSSLTQGMFSK 477
Score = 115 bits (289), Expect(2) = 2e-39
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = -3
Query: 1782 VRSATLDTWLPEQVAFIQSMGNEKSNIYWEAELPPNYDRVGIENFIRAKYEEKRWV 1615
VRSATLDTWLPEQVAFIQSMGNEK+N YWEAELPPNYDRVGIENFIRAKYE+KRW+
Sbjct: 68 VRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEDKRWI 123
Score = 75.1 bits (183), Expect(2) = 2e-39
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = -1
Query: 1562 YEEKRWVPRDGRQKSPSKAFEERSSVHSQRPGDRGGNGPTNVAVHASGERRNLPPPT-KT 1386
YE+KRW+P+DG+ +S S+ EE++S H RPGDRGG+G T+ + ++ E++N+ P+ K
Sbjct: 117 YEDKRWIPKDGKPRSTSQGREEKASAHWHRPGDRGGSGNTSNSENSFEEKKNVQAPSIKD 176
Query: 1385 SIPARNISVPAPSK 1344
+ PA IS+P P K
Sbjct: 177 NGPATRISLPVPPK 190