BLASTX nr result

ID: Coptis24_contig00011638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011638
         (1784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635314.1| PREDICTED: probable ADP-ribosylation factor ...   157   2e-79
ref|XP_003596474.1| Arf-GAP with coiled-coil, ANK repeat and PH ...   157   3e-76
ref|XP_003596475.1| Arf-GAP with coiled-coil, ANK repeat and PH ...   157   3e-76
ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor ...   238   4e-60
ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor ...   238   4e-60

>ref|XP_003635314.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD5-like [Vitis vinifera] gi|302144235|emb|CBI23473.3|
            unnamed protein product [Vitis vinifera]
          Length = 507

 Score =  157 bits (398), Expect(3) = 2e-79
 Identities = 110/312 (35%), Positives = 149/312 (47%), Gaps = 34/312 (10%)
 Frame = -3

Query: 1218 EPIVQNESTTKEVANST-LAPPPKIDYATDLFNMLSMGGPSENGSEASSADDNAWAGFQX 1042
            E  +      K+ A +T +  PP++DYATDLF MLS+    EN SE S+A+  +  GFQ 
Sbjct: 208  ESSISKAEPVKQAATATPIVSPPRVDYATDLFRMLSVKDSRENDSEISAANGVS-TGFQS 266

Query: 1041 XXXXXXXXXXXXXKQTETESKIPSASGLEDLFKDSPAVMPSAVLGQQPQKDLKSDIMSLF 862
                              ES I S +G+EDLFKD   V P  +  ++PQKD+K+DIM+LF
Sbjct: 267  AEASSTVEKSTP--SNPVESNIQSKTGIEDLFKDLTLVTPPIL--EKPQKDMKNDIMNLF 322

Query: 861  EKSKMASPFSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTQQSGSNGIYALGGSLP 682
            EKS M SPFS+H                              S  Q G+NG++     L 
Sbjct: 323  EKSSMVSPFSIHQQQVAMLAQQQSFLMAAAARSNGSHTFSG-SIHQPGTNGVH-----LS 376

Query: 681  NQNWLNVGYQAPGGRMPVAGQNELQMQMGNVRPSNSSGIYVPF----------------- 553
             QNW N+G+Q PG   PV  + +  MQMGN+RP++ SG  VP                  
Sbjct: 377  TQNWGNIGHQRPGVLTPVT-EPQKHMQMGNIRPTHWSGTNVPLPTHSLGTNGPLPAHSSG 435

Query: 552  ----------------QTPSIYNMETVAPVNGIASGSGVSRPPAMPPASSLTPTRTETDF 421
                             T S+YNM    P+NG+   +G  R P+  P SS+   ++  D+
Sbjct: 436  TNVPLPARSLGTNVPCPTSSMYNMSPAHPINGVTM-TGAGRLPSALPNSSVILPKSGNDY 494

Query: 420  DFSSLTQGMFSK 385
            DFSSLTQGMF+K
Sbjct: 495  DFSSLTQGMFTK 506



 Score =  117 bits (293), Expect(3) = 2e-79
 Identities = 54/56 (96%), Positives = 55/56 (98%)
 Frame = -3

Query: 1782 VRSATLDTWLPEQVAFIQSMGNEKSNIYWEAELPPNYDRVGIENFIRAKYEEKRWV 1615
            VRSATLDTWLP+QVAFIQSMGNEKSN YWEAELPPNYDRVGIENFIRAKYEEKRWV
Sbjct: 68   VRSATLDTWLPDQVAFIQSMGNEKSNSYWEAELPPNYDRVGIENFIRAKYEEKRWV 123



 Score = 70.9 bits (172), Expect(3) = 2e-79
 Identities = 34/74 (45%), Positives = 47/74 (63%)
 Frame = -1

Query: 1562 YEEKRWVPRDGRQKSPSKAFEERSSVHSQRPGDRGGNGPTNVAVHASGERRNLPPPTKTS 1383
            YEEKRWVPRDG+  S S+  ++++S +  RPG  G +  TN   H+S ++   PP T +S
Sbjct: 117  YEEKRWVPRDGKAISHSRESQQKASAYRPRPGGSGAHRYTNNVEHSSDKKNIHPPNTNSS 176

Query: 1382 IPARNISVPAPSKV 1341
            IPA    +PA SKV
Sbjct: 177  IPASKSRIPAASKV 190


>ref|XP_003596474.1| Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
            [Medicago truncatula] gi|355485522|gb|AES66725.1| Arf-GAP
            with coiled-coil, ANK repeat and PH domain-containing
            protein [Medicago truncatula]
          Length = 474

 Score =  157 bits (397), Expect(3) = 3e-76
 Identities = 110/284 (38%), Positives = 149/284 (52%), Gaps = 6/284 (2%)
 Frame = -3

Query: 1218 EPIV--QNESTTKEVANSTLAPPPKIDYATDLFNMLSMGGPSENGSEA--SSADDNAWAG 1051
            EP+   Q   T+K   ++  + PPK+DYATDLFN+LSM   +ENGS+A  ++ADD  WAG
Sbjct: 205  EPVASQQQPETSKPNTDTAQSTPPKVDYATDLFNLLSMDDTNENGSKAPGATADDINWAG 264

Query: 1050 FQXXXXXXXXXXXXXXKQTETESKIPSASGLEDLFKDSPAVMPSAVLGQQPQKDLKSDIM 871
            FQ                   ES   SA G+EDLFKDS +V PS +   +PQKD+K+DIM
Sbjct: 265  FQ--SAAEMSTAEKTGPPNAVESTPLSAPGVEDLFKDSFSVTPS-LTPVKPQKDVKNDIM 321

Query: 870  SLFEKSKMASPFSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTQQSGSNGIYALGG 691
            SLFEKS + SPFS+H                            P   QQ   N       
Sbjct: 322  SLFEKSNIVSPFSMHQQQLAMLAQQQSLLMAAAAKSTGVDLKYPTGMQQPSPN------- 374

Query: 690  SLPNQNWLNVGYQAPGGRMPVAGQNELQ--MQMGNVRPSNSSGIYVPFQTPSIYNMETVA 517
             +  QNW   G+    G +P+  Q ELQ  MQ  N+ P+  +G  V +     Y M  V 
Sbjct: 375  -VSVQNWPATGFPT-SGVVPIGVQGELQNHMQTRNMTPAYPAGNSVQYPPSGFYGMGQVG 432

Query: 516  PVNGIASGSGVSRPPAMPPASSLTPTRTETDFDFSSLTQGMFSK 385
            PVNG+ +  GV++P + P +S  T +++  ++DFSSLTQGMF+K
Sbjct: 433  PVNGMMT-VGVNKPQSTPASS--TASKSAKEYDFSSLTQGMFAK 473



 Score =  113 bits (283), Expect(3) = 3e-76
 Identities = 51/56 (91%), Positives = 55/56 (98%)
 Frame = -3

Query: 1782 VRSATLDTWLPEQVAFIQSMGNEKSNIYWEAELPPNYDRVGIENFIRAKYEEKRWV 1615
            VRSATLDTWLPEQVAFIQSMGNEK+N YWEAELPP+YDRVG+ENFIRAKYE+KRWV
Sbjct: 68   VRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPHYDRVGLENFIRAKYEDKRWV 123



 Score = 64.3 bits (155), Expect(3) = 3e-76
 Identities = 32/74 (43%), Positives = 43/74 (58%)
 Frame = -1

Query: 1562 YEEKRWVPRDGRQKSPSKAFEERSSVHSQRPGDRGGNGPTNVAVHASGERRNLPPPTKTS 1383
            YE+KRWV RDG  K+PS   E++S  H Q P +  G+G   VA +   ER+ + P    +
Sbjct: 117  YEDKRWVSRDGHPKTPSGLREDKSPSHRQMPAENSGHGYATVAENTFEERKKIQP--SNA 174

Query: 1382 IPARNISVPAPSKV 1341
            +PA    VPAP KV
Sbjct: 175  VPATRRRVPAPRKV 188


>ref|XP_003596475.1| Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
            [Medicago truncatula] gi|355485523|gb|AES66726.1| Arf-GAP
            with coiled-coil, ANK repeat and PH domain-containing
            protein [Medicago truncatula]
          Length = 423

 Score =  157 bits (397), Expect(3) = 3e-76
 Identities = 110/284 (38%), Positives = 149/284 (52%), Gaps = 6/284 (2%)
 Frame = -3

Query: 1218 EPIV--QNESTTKEVANSTLAPPPKIDYATDLFNMLSMGGPSENGSEA--SSADDNAWAG 1051
            EP+   Q   T+K   ++  + PPK+DYATDLFN+LSM   +ENGS+A  ++ADD  WAG
Sbjct: 154  EPVASQQQPETSKPNTDTAQSTPPKVDYATDLFNLLSMDDTNENGSKAPGATADDINWAG 213

Query: 1050 FQXXXXXXXXXXXXXXKQTETESKIPSASGLEDLFKDSPAVMPSAVLGQQPQKDLKSDIM 871
            FQ                   ES   SA G+EDLFKDS +V PS +   +PQKD+K+DIM
Sbjct: 214  FQ--SAAEMSTAEKTGPPNAVESTPLSAPGVEDLFKDSFSVTPS-LTPVKPQKDVKNDIM 270

Query: 870  SLFEKSKMASPFSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTQQSGSNGIYALGG 691
            SLFEKS + SPFS+H                            P   QQ   N       
Sbjct: 271  SLFEKSNIVSPFSMHQQQLAMLAQQQSLLMAAAAKSTGVDLKYPTGMQQPSPN------- 323

Query: 690  SLPNQNWLNVGYQAPGGRMPVAGQNELQ--MQMGNVRPSNSSGIYVPFQTPSIYNMETVA 517
             +  QNW   G+    G +P+  Q ELQ  MQ  N+ P+  +G  V +     Y M  V 
Sbjct: 324  -VSVQNWPATGFPT-SGVVPIGVQGELQNHMQTRNMTPAYPAGNSVQYPPSGFYGMGQVG 381

Query: 516  PVNGIASGSGVSRPPAMPPASSLTPTRTETDFDFSSLTQGMFSK 385
            PVNG+ +  GV++P + P +S  T +++  ++DFSSLTQGMF+K
Sbjct: 382  PVNGMMT-VGVNKPQSTPASS--TASKSAKEYDFSSLTQGMFAK 422



 Score =  113 bits (283), Expect(3) = 3e-76
 Identities = 51/56 (91%), Positives = 55/56 (98%)
 Frame = -3

Query: 1782 VRSATLDTWLPEQVAFIQSMGNEKSNIYWEAELPPNYDRVGIENFIRAKYEEKRWV 1615
            VRSATLDTWLPEQVAFIQSMGNEK+N YWEAELPP+YDRVG+ENFIRAKYE+KRWV
Sbjct: 17   VRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPHYDRVGLENFIRAKYEDKRWV 72



 Score = 64.3 bits (155), Expect(3) = 3e-76
 Identities = 32/74 (43%), Positives = 43/74 (58%)
 Frame = -1

Query: 1562 YEEKRWVPRDGRQKSPSKAFEERSSVHSQRPGDRGGNGPTNVAVHASGERRNLPPPTKTS 1383
            YE+KRWV RDG  K+PS   E++S  H Q P +  G+G   VA +   ER+ + P    +
Sbjct: 66   YEDKRWVSRDGHPKTPSGLREDKSPSHRQMPAENSGHGYATVAENTFEERKKIQP--SNA 123

Query: 1382 IPARNISVPAPSKV 1341
            +PA    VPAP KV
Sbjct: 124  VPATRRRVPAPRKV 137


>ref|XP_002284562.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD5-like isoform 1 [Vitis vinifera]
          Length = 475

 Score =  238 bits (607), Expect = 4e-60
 Identities = 138/281 (49%), Positives = 172/281 (61%), Gaps = 3/281 (1%)
 Frame = -3

Query: 1218 EPIVQNESTTKEVANST-LAPPPKIDYATDLFNMLSMGGPSENGSEASSADDNAWAGFQX 1042
            EP V    + K+ A+ST + PPPK+DYATDLFNMLSM  P+ENGSEA+SADDNAWAGFQ 
Sbjct: 206  EPSVPQAESAKQAADSTPVVPPPKVDYATDLFNMLSMDDPTENGSEAASADDNAWAGFQS 265

Query: 1041 XXXXXXXXXXXXXKQTETESKIPSASGLEDLFKDSPAVMPSAVLGQQPQKDLKSDIMSLF 862
                         K  E  ++  S SG+EDLFKDSP++MP+A    +PQKD+K+DIMSLF
Sbjct: 266  AEQTSTAEKTAPAKPIEGNTQ--STSGIEDLFKDSPSIMPAA--SDKPQKDVKNDIMSLF 321

Query: 861  EKSKMASPFSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTQQSGSNGIYALGGSLP 682
            EKS M SPFS+H                             ++ QQ  SNG       LP
Sbjct: 322  EKSNMVSPFSLHQQQLAMLAQQQSLLMAAAAKSTGVAPKFSINAQQHSSNGT-----DLP 376

Query: 681  NQNWLNVGYQAPGGRMPVAGQNELQ--MQMGNVRPSNSSGIYVPFQTPSIYNMETVAPVN 508
             QNW N+GYQ PG  M  AG N++Q  MQ  N+ P++ +G  VPF T S+Y M  VAP N
Sbjct: 377  TQNWPNMGYQIPGMMMQAAGNNDMQKFMQAANMGPTHPAGNSVPFATSSMYTMGQVAPTN 436

Query: 507  GIASGSGVSRPPAMPPASSLTPTRTETDFDFSSLTQGMFSK 385
            G+A+ S VSRPP+  PA+   PT+   ++DFSSLTQGMFSK
Sbjct: 437  GVATTS-VSRPPSASPAT--PPTQPGKEYDFSSLTQGMFSK 474



 Score =  115 bits (289), Expect(2) = 2e-39
 Identities = 52/56 (92%), Positives = 55/56 (98%)
 Frame = -3

Query: 1782 VRSATLDTWLPEQVAFIQSMGNEKSNIYWEAELPPNYDRVGIENFIRAKYEEKRWV 1615
            VRSATLDTWLPEQVAFIQSMGNEK+N YWEAELPPNYDRVGIENFIRAKYE+KRW+
Sbjct: 68   VRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEDKRWI 123



 Score = 75.1 bits (183), Expect(2) = 2e-39
 Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
 Frame = -1

Query: 1562 YEEKRWVPRDGRQKSPSKAFEERSSVHSQRPGDRGGNGPTNVAVHASGERRNLPPPT-KT 1386
            YE+KRW+P+DG+ +S S+  EE++S H  RPGDRGG+G T+ + ++  E++N+  P+ K 
Sbjct: 117  YEDKRWIPKDGKPRSTSQGREEKASAHWHRPGDRGGSGNTSNSENSFEEKKNVQAPSIKD 176

Query: 1385 SIPARNISVPAPSK 1344
            + PA  IS+P P K
Sbjct: 177  NGPATRISLPVPPK 190


>ref|XP_003634688.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD5-like isoform 2 [Vitis vinifera]
            gi|302143074|emb|CBI20369.3| unnamed protein product
            [Vitis vinifera]
          Length = 478

 Score =  238 bits (607), Expect = 4e-60
 Identities = 138/281 (49%), Positives = 172/281 (61%), Gaps = 3/281 (1%)
 Frame = -3

Query: 1218 EPIVQNESTTKEVANST-LAPPPKIDYATDLFNMLSMGGPSENGSEASSADDNAWAGFQX 1042
            EP V    + K+ A+ST + PPPK+DYATDLFNMLSM  P+ENGSEA+SADDNAWAGFQ 
Sbjct: 209  EPSVPQAESAKQAADSTPVVPPPKVDYATDLFNMLSMDDPTENGSEAASADDNAWAGFQS 268

Query: 1041 XXXXXXXXXXXXXKQTETESKIPSASGLEDLFKDSPAVMPSAVLGQQPQKDLKSDIMSLF 862
                         K  E  ++  S SG+EDLFKDSP++MP+A    +PQKD+K+DIMSLF
Sbjct: 269  AEQTSTAEKTAPAKPIEGNTQ--STSGIEDLFKDSPSIMPAA--SDKPQKDVKNDIMSLF 324

Query: 861  EKSKMASPFSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTQQSGSNGIYALGGSLP 682
            EKS M SPFS+H                             ++ QQ  SNG       LP
Sbjct: 325  EKSNMVSPFSLHQQQLAMLAQQQSLLMAAAAKSTGVAPKFSINAQQHSSNGT-----DLP 379

Query: 681  NQNWLNVGYQAPGGRMPVAGQNELQ--MQMGNVRPSNSSGIYVPFQTPSIYNMETVAPVN 508
             QNW N+GYQ PG  M  AG N++Q  MQ  N+ P++ +G  VPF T S+Y M  VAP N
Sbjct: 380  TQNWPNMGYQIPGMMMQAAGNNDMQKFMQAANMGPTHPAGNSVPFATSSMYTMGQVAPTN 439

Query: 507  GIASGSGVSRPPAMPPASSLTPTRTETDFDFSSLTQGMFSK 385
            G+A+ S VSRPP+  PA+   PT+   ++DFSSLTQGMFSK
Sbjct: 440  GVATTS-VSRPPSASPAT--PPTQPGKEYDFSSLTQGMFSK 477



 Score =  115 bits (289), Expect(2) = 2e-39
 Identities = 52/56 (92%), Positives = 55/56 (98%)
 Frame = -3

Query: 1782 VRSATLDTWLPEQVAFIQSMGNEKSNIYWEAELPPNYDRVGIENFIRAKYEEKRWV 1615
            VRSATLDTWLPEQVAFIQSMGNEK+N YWEAELPPNYDRVGIENFIRAKYE+KRW+
Sbjct: 68   VRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEDKRWI 123



 Score = 75.1 bits (183), Expect(2) = 2e-39
 Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
 Frame = -1

Query: 1562 YEEKRWVPRDGRQKSPSKAFEERSSVHSQRPGDRGGNGPTNVAVHASGERRNLPPPT-KT 1386
            YE+KRW+P+DG+ +S S+  EE++S H  RPGDRGG+G T+ + ++  E++N+  P+ K 
Sbjct: 117  YEDKRWIPKDGKPRSTSQGREEKASAHWHRPGDRGGSGNTSNSENSFEEKKNVQAPSIKD 176

Query: 1385 SIPARNISVPAPSK 1344
            + PA  IS+P P K
Sbjct: 177  NGPATRISLPVPPK 190


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