BLASTX nr result
ID: Coptis24_contig00011631
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011631
(568 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002262903.1| PREDICTED: ran-binding protein 1 homolog c [... 106 2e-21
ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana] ... 103 3e-20
ref|XP_002879247.1| hypothetical protein ARALYDRAFT_901981 [Arab... 103 3e-20
dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana] 103 3e-20
ref|XP_004145252.1| PREDICTED: ran-binding protein 1 homolog b-l... 102 3e-20
>ref|XP_002262903.1| PREDICTED: ran-binding protein 1 homolog c [Vitis vinifera]
gi|296081117|emb|CBI18249.3| unnamed protein product
[Vitis vinifera]
Length = 221
Score = 106 bits (265), Expect = 2e-21
Identities = 59/140 (42%), Positives = 85/140 (60%), Gaps = 4/140 (2%)
Frame = +1
Query: 58 EVEVWEAKHIGSVKFLKHKKSGKVRLVIKESKSLKICANHPISSGMVVKLCGGQCSACHW 237
E + W+ + +G+VKFLKHK SGKVRLV+++SK+LKICANH + M V+ G +C W
Sbjct: 60 EGKQWKERGVGTVKFLKHKGSGKVRLVMRQSKTLKICANHLVLPTMTVQEHSGNDKSCVW 119
Query: 238 EATDFSDGFSKERKFGLNFKYEEDRDTFMQTFNESADI----EDRDGNDAAIQLEEQQKL 405
ATDF+DG K+ F + F E+ TFM+ F E A+ E+ + AA L E+ +
Sbjct: 120 HATDFADGELKDELFCIRFASVENCKTFMEMFQEVAESQGKKEESEDASAAAGLLEKLSV 179
Query: 406 LDSRVENAGAEVEHIITGEE 465
DS+ E+ G E + T E+
Sbjct: 180 GDSKTEDKGQEEGSLATKEK 199
>ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana]
gi|75275082|sp|P92985.1|RBP1C_ARATH RecName:
Full=Ran-binding protein 1 homolog c
gi|1732511|gb|AAB38776.1| Ran binding protein 1 homolog
[Arabidopsis thaliana] gi|90568020|gb|ABD94080.1|
At5g58590 [Arabidopsis thaliana]
gi|332009690|gb|AED97073.1| Ran-binding protein 1-c
[Arabidopsis thaliana]
Length = 219
Score = 103 bits (256), Expect = 3e-20
Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Frame = +1
Query: 70 WEAKHIGSVKFLKHKKSGKVRLVIKESKSLKICANHPISSGMVVKLCGGQCSACHWEATD 249
W+ + G+VK LKHK++GKVRLV+++SK+LKICANH ISSGM V+ G +C W ATD
Sbjct: 65 WKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATD 124
Query: 250 FSDGFSKERKFGLNFKYEEDRDTFMQTFNESADIE----DRDGNDAAIQLEEQQKLLDSR 417
FSDG K+ F + F E+ TFM+ F E A+ + + D A L E + ++
Sbjct: 125 FSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSVEENI 184
Query: 418 VENAGAEVEHIITGEEDED 474
E E E +ED++
Sbjct: 185 SEEKAKEAEEKEPAKEDKE 203
Score = 55.1 bits (131), Expect = 8e-06
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 8/56 (14%)
Frame = +1
Query: 421 ENAGAEVEHII--------TGEEDEDVLLQMSSKLYEFERKGDQWKKLCSGTVRLL 564
E+ GA+V I+ TGEEDED +L + SK+Y F+++G+QWK+ +GTV+LL
Sbjct: 21 EDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKLL 76
>ref|XP_002879247.1| hypothetical protein ARALYDRAFT_901981 [Arabidopsis lyrata subsp.
lyrata] gi|297325086|gb|EFH55506.1| hypothetical protein
ARALYDRAFT_901981 [Arabidopsis lyrata subsp. lyrata]
Length = 220
Score = 103 bits (256), Expect = 3e-20
Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 9/143 (6%)
Frame = +1
Query: 70 WEAKHIGSVKFLKHKKSGKVRLVIKESKSLKICANHPISSGMVVKLCGGQCSACHWEATD 249
W+ + G+VKFLKH+ SGK+RLV+++SK+LKICANH + SGM V+ G +C W A D
Sbjct: 68 WKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARD 127
Query: 250 FSDGFSKERKFGLNFKYEEDRDTFMQTFNESADIED-----RDGNDAAIQLE----EQQK 402
FSDG K+ F + F E+ FMQ F E A+ E+ +D +D A LE E++K
Sbjct: 128 FSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTASLLEKLTVEEKK 187
Query: 403 LLDSRVENAGAEVEHIITGEEDE 471
+ E A + E+ + DE
Sbjct: 188 TEEKPAEKAEEKEENKKSEAVDE 210
>dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]
Length = 248
Score = 103 bits (256), Expect = 3e-20
Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Frame = +1
Query: 70 WEAKHIGSVKFLKHKKSGKVRLVIKESKSLKICANHPISSGMVVKLCGGQCSACHWEATD 249
W+ + G+VK LKHK++GKVRLV+++SK+LKICANH ISSGM V+ G +C W ATD
Sbjct: 65 WKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATD 124
Query: 250 FSDGFSKERKFGLNFKYEEDRDTFMQTFNESADIE----DRDGNDAAIQLEEQQKLLDSR 417
FSDG K+ F + F E+ TFM+ F E A+ + + D A L E + ++
Sbjct: 125 FSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSVEENI 184
Query: 418 VENAGAEVEHIITGEEDED 474
E E E +ED++
Sbjct: 185 SEEKAKEAEEKEPAKEDKE 203
Score = 55.1 bits (131), Expect = 8e-06
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 8/56 (14%)
Frame = +1
Query: 421 ENAGAEVEHII--------TGEEDEDVLLQMSSKLYEFERKGDQWKKLCSGTVRLL 564
E+ GA+V I+ TGEEDED +L + SK+Y F+++G+QWK+ +GTV+LL
Sbjct: 21 EDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKLL 76
>ref|XP_004145252.1| PREDICTED: ran-binding protein 1 homolog b-like [Cucumis sativus]
gi|449471757|ref|XP_004153400.1| PREDICTED: ran-binding
protein 1 homolog b-like [Cucumis sativus]
Length = 216
Score = 102 bits (255), Expect = 3e-20
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
Frame = +1
Query: 70 WEAKHIGSVKFLKHKKSGKVRLVIKESKSLKICANHPISSGMVVKLCGGQCSACHWEATD 249
W+ + G+VKFLKHK++GKVRLV+++SK+LKICANH + M V+ G +C W ATD
Sbjct: 64 WKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATD 123
Query: 250 FSDGFSKERKFGLNFKYEEDRDTFMQTFNESADIEDRDGND----AAIQLEEQQKLLDSR 417
F+DG K+ F + F E+ +FM+TF E A+ + + G + AA L E + + +
Sbjct: 124 FADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKGENKDASAAAGLLETLSVEEKK 183
Query: 418 VENAGAEVEHIITGEEDEDVLLQMSSKLYEFERKGDQ 528
E+ AE E +EDE + + E E+K D+
Sbjct: 184 TEDK-AEEEPAKVKKEDEP---KGEPEKSEAEKKNDE 216