BLASTX nr result
ID: Coptis24_contig00011631
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011631 (568 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002262903.1| PREDICTED: ran-binding protein 1 homolog c [... 106 2e-21 ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana] ... 103 3e-20 ref|XP_002879247.1| hypothetical protein ARALYDRAFT_901981 [Arab... 103 3e-20 dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana] 103 3e-20 ref|XP_004145252.1| PREDICTED: ran-binding protein 1 homolog b-l... 102 3e-20 >ref|XP_002262903.1| PREDICTED: ran-binding protein 1 homolog c [Vitis vinifera] gi|296081117|emb|CBI18249.3| unnamed protein product [Vitis vinifera] Length = 221 Score = 106 bits (265), Expect = 2e-21 Identities = 59/140 (42%), Positives = 85/140 (60%), Gaps = 4/140 (2%) Frame = +1 Query: 58 EVEVWEAKHIGSVKFLKHKKSGKVRLVIKESKSLKICANHPISSGMVVKLCGGQCSACHW 237 E + W+ + +G+VKFLKHK SGKVRLV+++SK+LKICANH + M V+ G +C W Sbjct: 60 EGKQWKERGVGTVKFLKHKGSGKVRLVMRQSKTLKICANHLVLPTMTVQEHSGNDKSCVW 119 Query: 238 EATDFSDGFSKERKFGLNFKYEEDRDTFMQTFNESADI----EDRDGNDAAIQLEEQQKL 405 ATDF+DG K+ F + F E+ TFM+ F E A+ E+ + AA L E+ + Sbjct: 120 HATDFADGELKDELFCIRFASVENCKTFMEMFQEVAESQGKKEESEDASAAAGLLEKLSV 179 Query: 406 LDSRVENAGAEVEHIITGEE 465 DS+ E+ G E + T E+ Sbjct: 180 GDSKTEDKGQEEGSLATKEK 199 >ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana] gi|75275082|sp|P92985.1|RBP1C_ARATH RecName: Full=Ran-binding protein 1 homolog c gi|1732511|gb|AAB38776.1| Ran binding protein 1 homolog [Arabidopsis thaliana] gi|90568020|gb|ABD94080.1| At5g58590 [Arabidopsis thaliana] gi|332009690|gb|AED97073.1| Ran-binding protein 1-c [Arabidopsis thaliana] Length = 219 Score = 103 bits (256), Expect = 3e-20 Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 4/139 (2%) Frame = +1 Query: 70 WEAKHIGSVKFLKHKKSGKVRLVIKESKSLKICANHPISSGMVVKLCGGQCSACHWEATD 249 W+ + G+VK LKHK++GKVRLV+++SK+LKICANH ISSGM V+ G +C W ATD Sbjct: 65 WKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATD 124 Query: 250 FSDGFSKERKFGLNFKYEEDRDTFMQTFNESADIE----DRDGNDAAIQLEEQQKLLDSR 417 FSDG K+ F + F E+ TFM+ F E A+ + + D A L E + ++ Sbjct: 125 FSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSVEENI 184 Query: 418 VENAGAEVEHIITGEEDED 474 E E E +ED++ Sbjct: 185 SEEKAKEAEEKEPAKEDKE 203 Score = 55.1 bits (131), Expect = 8e-06 Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 8/56 (14%) Frame = +1 Query: 421 ENAGAEVEHII--------TGEEDEDVLLQMSSKLYEFERKGDQWKKLCSGTVRLL 564 E+ GA+V I+ TGEEDED +L + SK+Y F+++G+QWK+ +GTV+LL Sbjct: 21 EDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKLL 76 >ref|XP_002879247.1| hypothetical protein ARALYDRAFT_901981 [Arabidopsis lyrata subsp. lyrata] gi|297325086|gb|EFH55506.1| hypothetical protein ARALYDRAFT_901981 [Arabidopsis lyrata subsp. lyrata] Length = 220 Score = 103 bits (256), Expect = 3e-20 Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 9/143 (6%) Frame = +1 Query: 70 WEAKHIGSVKFLKHKKSGKVRLVIKESKSLKICANHPISSGMVVKLCGGQCSACHWEATD 249 W+ + G+VKFLKH+ SGK+RLV+++SK+LKICANH + SGM V+ G +C W A D Sbjct: 68 WKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARD 127 Query: 250 FSDGFSKERKFGLNFKYEEDRDTFMQTFNESADIED-----RDGNDAAIQLE----EQQK 402 FSDG K+ F + F E+ FMQ F E A+ E+ +D +D A LE E++K Sbjct: 128 FSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTASLLEKLTVEEKK 187 Query: 403 LLDSRVENAGAEVEHIITGEEDE 471 + E A + E+ + DE Sbjct: 188 TEEKPAEKAEEKEENKKSEAVDE 210 >dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana] Length = 248 Score = 103 bits (256), Expect = 3e-20 Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 4/139 (2%) Frame = +1 Query: 70 WEAKHIGSVKFLKHKKSGKVRLVIKESKSLKICANHPISSGMVVKLCGGQCSACHWEATD 249 W+ + G+VK LKHK++GKVRLV+++SK+LKICANH ISSGM V+ G +C W ATD Sbjct: 65 WKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATD 124 Query: 250 FSDGFSKERKFGLNFKYEEDRDTFMQTFNESADIE----DRDGNDAAIQLEEQQKLLDSR 417 FSDG K+ F + F E+ TFM+ F E A+ + + D A L E + ++ Sbjct: 125 FSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSVEENI 184 Query: 418 VENAGAEVEHIITGEEDED 474 E E E +ED++ Sbjct: 185 SEEKAKEAEEKEPAKEDKE 203 Score = 55.1 bits (131), Expect = 8e-06 Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 8/56 (14%) Frame = +1 Query: 421 ENAGAEVEHII--------TGEEDEDVLLQMSSKLYEFERKGDQWKKLCSGTVRLL 564 E+ GA+V I+ TGEEDED +L + SK+Y F+++G+QWK+ +GTV+LL Sbjct: 21 EDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKLL 76 >ref|XP_004145252.1| PREDICTED: ran-binding protein 1 homolog b-like [Cucumis sativus] gi|449471757|ref|XP_004153400.1| PREDICTED: ran-binding protein 1 homolog b-like [Cucumis sativus] Length = 216 Score = 102 bits (255), Expect = 3e-20 Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 4/157 (2%) Frame = +1 Query: 70 WEAKHIGSVKFLKHKKSGKVRLVIKESKSLKICANHPISSGMVVKLCGGQCSACHWEATD 249 W+ + G+VKFLKHK++GKVRLV+++SK+LKICANH + M V+ G +C W ATD Sbjct: 64 WKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATD 123 Query: 250 FSDGFSKERKFGLNFKYEEDRDTFMQTFNESADIEDRDGND----AAIQLEEQQKLLDSR 417 F+DG K+ F + F E+ +FM+TF E A+ + + G + AA L E + + + Sbjct: 124 FADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKGENKDASAAAGLLETLSVEEKK 183 Query: 418 VENAGAEVEHIITGEEDEDVLLQMSSKLYEFERKGDQ 528 E+ AE E +EDE + + E E+K D+ Sbjct: 184 TEDK-AEEEPAKVKKEDEP---KGEPEKSEAEKKNDE 216