BLASTX nr result

ID: Coptis24_contig00011628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011628
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20108.3| unnamed protein product [Vitis vinifera]              102   3e-20
emb|CAN60218.1| hypothetical protein VITISV_006612 [Vitis vinifera]   101   6e-20
ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
dbj|BAB02646.1| Ac transposase-like protein [Arabidopsis thalian...    91   1e-16
emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]    87   1e-15

>emb|CBI20108.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/133 (39%), Positives = 79/133 (59%)
 Frame = -3

Query: 407 IHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIAVVLDPRFKLKIVEYYFNLI 228
           IH++LI W +S +  +S++A KMK KFDKYWS C+L LA+AV+LDPRFK+K+VEYY+  I
Sbjct: 437 IHIQLIEWCKSPDDFISSLALKMKAKFDKYWSKCSLALAVAVILDPRFKMKLVEYYYPQI 496

Query: 227 YGIDSYTHFMRIRDGLSDIYSYYERTFPXXXXXXXXXXXXXXXXSYDIRSTSQEKLKAFD 48
           YG D+      + DG+ ++++ Y  T                  S D    S+++LK FD
Sbjct: 497 YGTDAADRIKDVSDGIKELFNVYCSTSASLHQGVALPGSSLPSTSND----SRDRLKGFD 552

Query: 47  SWYNNGVSTGQNR 9
            + +    T QN+
Sbjct: 553 KFIH---ETSQNQ 562


>emb|CAN60218.1| hypothetical protein VITISV_006612 [Vitis vinifera]
          Length = 667

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/133 (39%), Positives = 79/133 (59%)
 Frame = -3

Query: 407 IHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIAVVLDPRFKLKIVEYYFNLI 228
           IH++LI W +S +  +S++A KMK KFDKYWS C+L LA+AV+LDPRFK+K+VEYY+  I
Sbjct: 437 IHIQLIEWCKSPDDFISSLALKMKAKFDKYWSKCSLALAVAVILDPRFKMKLVEYYYPQI 496

Query: 227 YGIDSYTHFMRIRDGLSDIYSYYERTFPXXXXXXXXXXXXXXXXSYDIRSTSQEKLKAFD 48
           YG D+      + DG+ ++++ Y  T                  S D    S+++LK FD
Sbjct: 497 YGNDAADRIKDVSDGIKELFNVYCSTSASLHQGVALPGSSLPSTSND----SRDRLKGFD 552

Query: 47  SWYNNGVSTGQNR 9
            + +    T QN+
Sbjct: 553 KFIH---ETSQNQ 562


>ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|222873882|gb|EEF11013.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 38/83 (45%), Positives = 61/83 (73%)
 Frame = -3

Query: 407 IHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIAVVLDPRFKLKIVEYYFNLI 228
           +H++LI W ++ +  +S+MA KMK KFD+YWS C+L LA+A +LDPRFK+K+VEYY++ I
Sbjct: 441 VHIQLIEWCKNPDDFLSSMASKMKAKFDRYWSKCSLALAVAAILDPRFKMKLVEYYYSQI 500

Query: 227 YGIDSYTHFMRIRDGLSDIYSYY 159
           YG  +      + DG+ ++++ Y
Sbjct: 501 YGSTALDRIKEVSDGIKELFNAY 523


>dbj|BAB02646.1| Ac transposase-like protein [Arabidopsis thaliana]
           gi|18176330|gb|AAL60024.1| unknown protein [Arabidopsis
           thaliana] gi|20465375|gb|AAM20091.1| unknown protein
           [Arabidopsis thaliana]
          Length = 662

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 36/83 (43%), Positives = 60/83 (72%)
 Frame = -3

Query: 407 IHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIAVVLDPRFKLKIVEYYFNLI 228
           IH++L+ W ++ ++ +S++A  MK KFD+YW+ C+LVLAIA +LDPRFK+K+VEYY++ I
Sbjct: 439 IHIQLVEWCKNQDNFLSSLAANMKAKFDEYWNKCSLVLAIAAILDPRFKMKLVEYYYSKI 498

Query: 227 YGIDSYTHFMRIRDGLSDIYSYY 159
           YG  +      + +G+ ++   Y
Sbjct: 499 YGSTALDRIKEVSNGVKELLDAY 521


>emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]
          Length = 1266

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/80 (50%), Positives = 56/80 (70%)
 Frame = -3

Query: 395 LIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIAVVLDPRFKLKIVEYYFNLIYGID 216
           L  W    N +VSTMA  M  KFDKYWS C++V+AIAVVLDPR+K+KI+E+YF ++YG +
Sbjct: 509 LYDWLICSNEVVSTMASSMLEKFDKYWSGCHIVMAIAVVLDPRYKMKILEFYFPIMYGSE 568

Query: 215 SYTHFMRIRDGLSDIYSYYE 156
           + +   +IR    D+ S Y+
Sbjct: 569 ASSEIGKIRQLCYDLLSEYQ 588


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