BLASTX nr result

ID: Coptis24_contig00011620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011620
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274189.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   147   1e-33
ref|XP_002512080.1| conserved hypothetical protein [Ricinus comm...   144   1e-32
ref|XP_003614098.1| hypothetical protein MTR_5g044720 [Medicago ...   143   2e-32
ref|XP_003520113.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 prot...   142   2e-32
ref|XP_003517837.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   142   2e-32

>ref|XP_002274189.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
           gi|297738087|emb|CBI27288.3| unnamed protein product
           [Vitis vinifera]
          Length = 437

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/81 (90%), Positives = 77/81 (95%)
 Frame = -2

Query: 244 MLMDLVSPLFPSAFIFIVCLGSISRSFTGVASGATRAALTQHFSLQNNAADISAKEGSQE 65
           MLMDLVSPLFPSAF+FIVCLGS+SRSFTGVASGATRAALTQHF+LQNNAADISAKEGSQE
Sbjct: 154 MLMDLVSPLFPSAFVFIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQE 213

Query: 64  TLATMTGMVLGMLLAHITMGH 2
           T+ATM GM  GMLLA ITMGH
Sbjct: 214 TVATMVGMAFGMLLARITMGH 234


>ref|XP_002512080.1| conserved hypothetical protein [Ricinus communis]
           gi|223549260|gb|EEF50749.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score =  144 bits (362), Expect = 1e-32
 Identities = 71/81 (87%), Positives = 78/81 (96%)
 Frame = -2

Query: 244 MLMDLVSPLFPSAFIFIVCLGSISRSFTGVASGATRAALTQHFSLQNNAADISAKEGSQE 65
           MLMDLVSPLFPSAF+ +VCLGS+SRSFTGVASGATRAALTQHF+LQ+NAADISAKEGSQE
Sbjct: 98  MLMDLVSPLFPSAFVVVVCLGSLSRSFTGVASGATRAALTQHFALQSNAADISAKEGSQE 157

Query: 64  TLATMTGMVLGMLLAHITMGH 2
           T+ATMTGM LGMLLA IT+GH
Sbjct: 158 TVATMTGMALGMLLARITIGH 178


>ref|XP_003614098.1| hypothetical protein MTR_5g044720 [Medicago truncatula]
           gi|355515433|gb|AES97056.1| hypothetical protein
           MTR_5g044720 [Medicago truncatula]
          Length = 749

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/81 (87%), Positives = 77/81 (95%)
 Frame = -2

Query: 244 MLMDLVSPLFPSAFIFIVCLGSISRSFTGVASGATRAALTQHFSLQNNAADISAKEGSQE 65
           MLMDL+SPLFPSAF+FIVCLGSISRSFTGVASGATRAALTQHF+LQ+NAADISAKEGSQE
Sbjct: 466 MLMDLISPLFPSAFVFIVCLGSISRSFTGVASGATRAALTQHFALQDNAADISAKEGSQE 525

Query: 64  TLATMTGMVLGMLLAHITMGH 2
           T+ATM GM LGML+A IT GH
Sbjct: 526 TVATMIGMALGMLVARITTGH 546


>ref|XP_003520113.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 protein C16orf58 homolog
           [Glycine max]
          Length = 486

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/81 (85%), Positives = 78/81 (96%)
 Frame = -2

Query: 244 MLMDLVSPLFPSAFIFIVCLGSISRSFTGVASGATRAALTQHFSLQNNAADISAKEGSQE 65
           MLMDL+SPLFPSAF+F+VCLGSISRSFTGVASGATRAALTQHF+LQ+NAADISAKEGSQE
Sbjct: 204 MLMDLISPLFPSAFVFVVCLGSISRSFTGVASGATRAALTQHFALQDNAADISAKEGSQE 263

Query: 64  TLATMTGMVLGMLLAHITMGH 2
           T+ATM GM LGML+A +T+GH
Sbjct: 264 TVATMIGMALGMLVARLTIGH 284


>ref|XP_003517837.1| PREDICTED: UPF0420 protein C16orf58 homolog [Glycine max]
          Length = 473

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/81 (85%), Positives = 78/81 (96%)
 Frame = -2

Query: 244 MLMDLVSPLFPSAFIFIVCLGSISRSFTGVASGATRAALTQHFSLQNNAADISAKEGSQE 65
           MLMDL+SPLFPSAF+F+VCLGSISRSFTGVASGATRAALTQHF+LQ+NAADISAKEGSQE
Sbjct: 191 MLMDLISPLFPSAFVFVVCLGSISRSFTGVASGATRAALTQHFALQDNAADISAKEGSQE 250

Query: 64  TLATMTGMVLGMLLAHITMGH 2
           T+ATM GM LGML+A +T+GH
Sbjct: 251 TVATMIGMALGMLVARLTIGH 271


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