BLASTX nr result

ID: Coptis24_contig00011610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011610
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD66219.2| JOINTLESS [Malus x domestica] gi|302398887|gb|ADL...   213   6e-53
gb|ACV74250.1| EXTRAPETALS [Petunia x hybrida] gi|267850663|gb|A...   207   3e-51
sp|Q9FUY6.1|JOIN_SOLLC RecName: Full=MADS-box protein JOINTLESS;...   206   6e-51
ref|XP_004143442.1| PREDICTED: MADS-box protein SVP-like [Cucumi...   206   1e-50
pir||H84613 probable MADS-box protein [imported] - Arabidopsis t...   206   1e-50

>gb|ABD66219.2| JOINTLESS [Malus x domestica] gi|302398887|gb|ADL36738.1| MADS
           domain class transcription factor [Malus x domestica]
          Length = 224

 Score =  213 bits (542), Expect = 6e-53
 Identities = 118/176 (67%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
 Frame = -1

Query: 840 MVREKIQIKKITNTTARQVTFSKRRRGLFKKAEELSILCDADVALIIFSATGKLFEFSSS 661
           M REKIQIKKI N TARQVTFSKRRRGL KKAEELS+LCDAD+ALIIFS+TGKLFE++SS
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLLKKAEELSVLCDADIALIIFSSTGKLFEYASS 60

Query: 660 SMKEIIERHNLHSKNLQKLDQPSLELQL-ENSNYARLSKEIGEKSHQLRQMRXXXXXXXX 484
           SMKEI+ERHNLHSKNL+KL+QPSL+LQL ENSNY RLSKEI  KSHQLRQMR        
Sbjct: 61  SMKEILERHNLHSKNLEKLEQPSLQLQLVENSNYTRLSKEIAAKSHQLRQMRGEEIQGLN 120

Query: 483 XXXXXXXXXXXETGLGRVLETKSEKIMKEIGTLHSKVWIQNF*NLMQLNDNCNLEI 316
                      ETGLGRV+E KSEKIMKEIG L      +N   LM+ N+    ++
Sbjct: 121 LEELQQLEKSLETGLGRVIEKKSEKIMKEIGDLQ-----RNGMQLMEENERLRQQV 171


>gb|ACV74250.1| EXTRAPETALS [Petunia x hybrida] gi|267850663|gb|ACY82403.1|
           MADS-box protein 20 [Petunia x hybrida]
          Length = 233

 Score =  207 bits (528), Expect = 3e-51
 Identities = 112/156 (71%), Positives = 124/156 (79%), Gaps = 1/156 (0%)
 Frame = -1

Query: 840 MVREKIQIKKITNTTARQVTFSKRRRGLFKKAEELSILCDADVALIIFSATGKLFEFSSS 661
           M REKIQIKKI N TARQVTFSKRRRGLFKKAEELS+LCDADVALIIFS+TGKLFE+SSS
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYSSS 60

Query: 660 SMKEIIERHNLHSKNLQKLDQPSLELQL-ENSNYARLSKEIGEKSHQLRQMRXXXXXXXX 484
           SMKEI+ER +LHSKNL+KLDQPSLELQL ENSNY+RLS+EI EKSH+LRQMR        
Sbjct: 61  SMKEILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSREISEKSHRLRQMRGEELQGLS 120

Query: 483 XXXXXXXXXXXETGLGRVLETKSEKIMKEIGTLHSK 376
                      E GLGRV+E K +KIM+EI  L  K
Sbjct: 121 IEELQQLERTLEAGLGRVIERKGDKIMREINQLQQK 156


>sp|Q9FUY6.1|JOIN_SOLLC RecName: Full=MADS-box protein JOINTLESS; AltName: Full=LeMADS
           gi|9964074|gb|AAG09811.1| MADS-box transcription factor
           JOINTLESS [Solanum lycopersicum]
          Length = 265

 Score =  206 bits (525), Expect = 6e-51
 Identities = 111/156 (71%), Positives = 125/156 (80%), Gaps = 1/156 (0%)
 Frame = -1

Query: 840 MVREKIQIKKITNTTARQVTFSKRRRGLFKKAEELSILCDADVALIIFSATGKLFEFSSS 661
           M REKIQIKKI N+TARQVTFSKRRRGLFKKAEELS+LCDADVALIIFS+TGKLF++SSS
Sbjct: 1   MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSS 60

Query: 660 SMKEIIERHNLHSKNLQKLDQPSLELQL-ENSNYARLSKEIGEKSHQLRQMRXXXXXXXX 484
           SMK+I+ER +LHSKNL+KLDQPSLELQL ENSNY+RLSKEI EKSH+LRQMR        
Sbjct: 61  SMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLN 120

Query: 483 XXXXXXXXXXXETGLGRVLETKSEKIMKEIGTLHSK 376
                      ETGL RV+E K +KIM+EI  L  K
Sbjct: 121 IEELQQLERSLETGLSRVIERKGDKIMREINQLQQK 156


>ref|XP_004143442.1| PREDICTED: MADS-box protein SVP-like [Cucumis sativus]
          Length = 228

 Score =  206 bits (523), Expect = 1e-50
 Identities = 112/156 (71%), Positives = 123/156 (78%), Gaps = 1/156 (0%)
 Frame = -1

Query: 840 MVREKIQIKKITNTTARQVTFSKRRRGLFKKAEELSILCDADVALIIFSATGKLFEFSSS 661
           M +EKIQI+KI N TARQVTFSKRRRGLFKKA+ELS+LCDADVALIIFSATGKLFE+SSS
Sbjct: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60

Query: 660 SMKEIIERHNLHSKNLQKLDQPSLELQL-ENSNYARLSKEIGEKSHQLRQMRXXXXXXXX 484
           SMK IIERHNLHSKNLQKL+QPSLELQL ENSNY RL+KEI EK+HQLRQMR        
Sbjct: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIAEKTHQLRQMRGEELQTLN 120

Query: 483 XXXXXXXXXXXETGLGRVLETKSEKIMKEIGTLHSK 376
                      E+GL RV+E K E+IMKEI  L  K
Sbjct: 121 IEELQQLEKSLESGLSRVMEKKGERIMKEITDLQRK 156


>pir||H84613 probable MADS-box protein [imported] - Arabidopsis thaliana
           gi|4544457|gb|AAD22365.1| putative MADS-box protein
           [Arabidopsis thaliana] gi|225898126|dbj|BAH30395.1|
           hypothetical protein [Arabidopsis thaliana]
          Length = 210

 Score =  206 bits (523), Expect = 1e-50
 Identities = 111/156 (71%), Positives = 124/156 (79%), Gaps = 1/156 (0%)
 Frame = -1

Query: 840 MVREKIQIKKITNTTARQVTFSKRRRGLFKKAEELSILCDADVALIIFSATGKLFEFSSS 661
           M REKIQI+KI N TARQVTFSKRRRGLFKKAEELS+LCDADVALIIFS+TGKLFEF SS
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60

Query: 660 SMKEIIERHNLHSKNLQKLDQPSLELQL-ENSNYARLSKEIGEKSHQLRQMRXXXXXXXX 484
           SMKE++ERHNL SKNL+KLDQPSLELQL ENS++AR+SKEI +KSH+LRQMR        
Sbjct: 61  SMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 120

Query: 483 XXXXXXXXXXXETGLGRVLETKSEKIMKEIGTLHSK 376
                      ETGL RV+ETKS+KIM EI  L  K
Sbjct: 121 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKK 156


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