BLASTX nr result
ID: Coptis24_contig00011609
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011609 (481 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT08742.1| unknown [Hyacinthus orientalis] 123 2e-26 ref|XP_002301884.1| predicted protein [Populus trichocarpa] gi|2... 118 4e-25 gb|ABK92869.1| unknown [Populus trichocarpa] 118 4e-25 emb|CBI40800.3| unnamed protein product [Vitis vinifera] 117 1e-24 ref|XP_002510758.1| conserved hypothetical protein [Ricinus comm... 117 1e-24 >gb|AAT08742.1| unknown [Hyacinthus orientalis] Length = 156 Score = 123 bits (308), Expect = 2e-26 Identities = 64/112 (57%), Positives = 68/112 (60%) Frame = -3 Query: 479 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTXXXXXXXXXXXXXXX 300 VRDDTETFLN++VPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLT Sbjct: 75 VRDDTETFLNRVVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLT--------------- 119 Query: 299 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIWLCEHRDYATPRKIVVTLNGV 144 GIWLCEHRD+ATPRKIVVTLNG+ Sbjct: 120 ---------------IPITDGRLNMGTWQGIWLCEHRDHATPRKIVVTLNGM 156 >ref|XP_002301884.1| predicted protein [Populus trichocarpa] gi|222843610|gb|EEE81157.1| predicted protein [Populus trichocarpa] Length = 163 Score = 118 bits (296), Expect = 4e-25 Identities = 62/112 (55%), Positives = 66/112 (58%) Frame = -3 Query: 479 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTXXXXXXXXXXXXXXX 300 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGC+LT Sbjct: 82 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCSLT--------------- 126 Query: 299 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIWLCEHRDYATPRKIVVTLNGV 144 GIWLCEHRD+ T RK+VVTLNG+ Sbjct: 127 ---------------IPITDGKLNMGTWQGIWLCEHRDHPTARKVVVTLNGI 163 >gb|ABK92869.1| unknown [Populus trichocarpa] Length = 147 Score = 118 bits (296), Expect = 4e-25 Identities = 62/112 (55%), Positives = 66/112 (58%) Frame = -3 Query: 479 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTXXXXXXXXXXXXXXX 300 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGC+LT Sbjct: 66 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCSLT--------------- 110 Query: 299 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIWLCEHRDYATPRKIVVTLNGV 144 GIWLCEHRD+ T RK+VVTLNG+ Sbjct: 111 ---------------IPITDGKLNMGTWQGIWLCEHRDHPTARKVVVTLNGI 147 >emb|CBI40800.3| unnamed protein product [Vitis vinifera] Length = 148 Score = 117 bits (293), Expect = 1e-24 Identities = 63/112 (56%), Positives = 66/112 (58%) Frame = -3 Query: 479 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTXXXXXXXXXXXXXXX 300 VRDDTETFL+KIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGC+LT Sbjct: 67 VRDDTETFLSKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCSLT--------------- 111 Query: 299 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIWLCEHRDYATPRKIVVTLNGV 144 GIWLCEHRD AT RK+VVTLNGV Sbjct: 112 ---------------IPITDGQLNMGTWQGIWLCEHRDRATARKVVVTLNGV 148 >ref|XP_002510758.1| conserved hypothetical protein [Ricinus communis] gi|223551459|gb|EEF52945.1| conserved hypothetical protein [Ricinus communis] Length = 195 Score = 117 bits (293), Expect = 1e-24 Identities = 61/112 (54%), Positives = 65/112 (58%) Frame = -3 Query: 479 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTXXXXXXXXXXXXXXX 300 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGC LT Sbjct: 114 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCQLT--------------- 158 Query: 299 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIWLCEHRDYATPRKIVVTLNGV 144 GIWLCEHRD+ T RK+V+TLNG+ Sbjct: 159 ---------------IPITNGKLNMGTWQGIWLCEHRDHPTARKVVITLNGI 195