BLASTX nr result

ID: Coptis24_contig00011609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011609
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT08742.1| unknown [Hyacinthus orientalis]                        123   2e-26
ref|XP_002301884.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
gb|ABK92869.1| unknown [Populus trichocarpa]                          118   4e-25
emb|CBI40800.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002510758.1| conserved hypothetical protein [Ricinus comm...   117   1e-24

>gb|AAT08742.1| unknown [Hyacinthus orientalis]
          Length = 156

 Score =  123 bits (308), Expect = 2e-26
 Identities = 64/112 (57%), Positives = 68/112 (60%)
 Frame = -3

Query: 479 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTXXXXXXXXXXXXXXX 300
           VRDDTETFLN++VPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLT               
Sbjct: 75  VRDDTETFLNRVVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLT--------------- 119

Query: 299 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIWLCEHRDYATPRKIVVTLNGV 144
                                        GIWLCEHRD+ATPRKIVVTLNG+
Sbjct: 120 ---------------IPITDGRLNMGTWQGIWLCEHRDHATPRKIVVTLNGM 156


>ref|XP_002301884.1| predicted protein [Populus trichocarpa] gi|222843610|gb|EEE81157.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  118 bits (296), Expect = 4e-25
 Identities = 62/112 (55%), Positives = 66/112 (58%)
 Frame = -3

Query: 479 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTXXXXXXXXXXXXXXX 300
           VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGC+LT               
Sbjct: 82  VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCSLT--------------- 126

Query: 299 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIWLCEHRDYATPRKIVVTLNGV 144
                                        GIWLCEHRD+ T RK+VVTLNG+
Sbjct: 127 ---------------IPITDGKLNMGTWQGIWLCEHRDHPTARKVVVTLNGI 163


>gb|ABK92869.1| unknown [Populus trichocarpa]
          Length = 147

 Score =  118 bits (296), Expect = 4e-25
 Identities = 62/112 (55%), Positives = 66/112 (58%)
 Frame = -3

Query: 479 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTXXXXXXXXXXXXXXX 300
           VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGC+LT               
Sbjct: 66  VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCSLT--------------- 110

Query: 299 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIWLCEHRDYATPRKIVVTLNGV 144
                                        GIWLCEHRD+ T RK+VVTLNG+
Sbjct: 111 ---------------IPITDGKLNMGTWQGIWLCEHRDHPTARKVVVTLNGI 147


>emb|CBI40800.3| unnamed protein product [Vitis vinifera]
          Length = 148

 Score =  117 bits (293), Expect = 1e-24
 Identities = 63/112 (56%), Positives = 66/112 (58%)
 Frame = -3

Query: 479 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTXXXXXXXXXXXXXXX 300
           VRDDTETFL+KIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGC+LT               
Sbjct: 67  VRDDTETFLSKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCSLT--------------- 111

Query: 299 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIWLCEHRDYATPRKIVVTLNGV 144
                                        GIWLCEHRD AT RK+VVTLNGV
Sbjct: 112 ---------------IPITDGQLNMGTWQGIWLCEHRDRATARKVVVTLNGV 148


>ref|XP_002510758.1| conserved hypothetical protein [Ricinus communis]
           gi|223551459|gb|EEF52945.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 195

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/112 (54%), Positives = 65/112 (58%)
 Frame = -3

Query: 479 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTXXXXXXXXXXXXXXX 300
           VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGC LT               
Sbjct: 114 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCQLT--------------- 158

Query: 299 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIWLCEHRDYATPRKIVVTLNGV 144
                                        GIWLCEHRD+ T RK+V+TLNG+
Sbjct: 159 ---------------IPITNGKLNMGTWQGIWLCEHRDHPTARKVVITLNGI 195


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