BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011608
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi...   119   3e-25
emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]   118   6e-25
ref|XP_002510276.1| conserved hypothetical protein [Ricinus comm...   105   5e-21
sp|D0EL35.2|CTC1_ARATH RecName: Full=CST complex subunit CTC1; A...    85   7e-15
gb|ACX37401.1| conserved telomere maintenance component 1 [Arabi...    85   7e-15

>ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera]
          Length = 1215

 Score =  119 bits (298), Expect = 3e-25
 Identities = 67/161 (41%), Positives = 87/161 (54%), Gaps = 12/161 (7%)
 Frame = +2

Query: 8   VLSWNFIPFKCGSNGLLEIIRWGFPDSVNTLTRCSNFDTFPLCLSSLRDEVLETRSRXXX 187
           VLSWNFIP KCG  G LEIIRW F DS   L+RCSN D FPL L S  D    ++ R   
Sbjct: 143 VLSWNFIPSKCG--GFLEIIRWSFLDSTARLSRCSNLDAFPLVLGSSSDSKDGSKGRYSL 200

Query: 188 XXXXXXXXXXXX--CTIQDSTSSR----------NVSGFLAEVLVCKCKLCRSKVSVKTL 331
                         C++   TS            N+ GFLA+++VC+C+LC SK  + +L
Sbjct: 201 RGVLESVSPVSVIPCSVVTRTSKSGSGTNFSTPSNLRGFLAQIMVCECELCCSKEGLMSL 260

Query: 332 CSSVGGKNGYLFDVSVIVYFFESASSWHPVMSKLVGNVVSV 454
                G  G+ F    I+YF  S SSWHP+ +KL+GNV+ +
Sbjct: 261 DDPRKGLRGHCFTKPQILYFCGSGSSWHPLFTKLIGNVICI 301


>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score =  118 bits (295), Expect = 6e-25
 Identities = 67/161 (41%), Positives = 87/161 (54%), Gaps = 12/161 (7%)
 Frame = +2

Query: 8   VLSWNFIPFKCGSNGLLEIIRWGFPDSVNTLTRCSNFDTFPLCLSSLRDEVLETRSRXXX 187
           VLSWNFIP KCG  G LEIIRW F DS   L+RCSN D FPL L S  D    ++ R   
Sbjct: 285 VLSWNFIPSKCG--GFLEIIRWSFLDSTARLSRCSNLDAFPLVLGSSSDSKDGSKGRYSL 342

Query: 188 XXXXXXXXXXXX--CTIQDSTSSR----------NVSGFLAEVLVCKCKLCRSKVSVKTL 331
                         C++   TS            N+ GFLA+++VC+C+LC SK  + +L
Sbjct: 343 RGVLESVSPVSVIPCSVVTRTSXSGSGTNFSTPSNLRGFLAQIMVCECELCCSKEVLMSL 402

Query: 332 CSSVGGKNGYLFDVSVIVYFFESASSWHPVMSKLVGNVVSV 454
                G  G+ F    I+YF  S SSWHP+ +KL+GNV+ +
Sbjct: 403 DDPRKGLRGHCFTKPQILYFCGSGSSWHPLFTKLIGNVICI 443


>ref|XP_002510276.1| conserved hypothetical protein [Ricinus communis]
           gi|223550977|gb|EEF52463.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1159

 Score =  105 bits (261), Expect = 5e-21
 Identities = 60/155 (38%), Positives = 88/155 (56%), Gaps = 5/155 (3%)
 Frame = +2

Query: 5   NVLSWNFIPFKCGSNGLLEIIRWGFPDSVN--TLTRCSNFDTFPLC---LSSLRDEVLET 169
           +VLSWNFIP K    G LEII+  FPDS N   L+RCS+ D+ P+      S +++ L+ 
Sbjct: 116 HVLSWNFIPLKHSPGGFLEIIKCSFPDSTNNIALSRCSSVDSIPIISVPSPSSKEDRLKA 175

Query: 170 RSRXXXXXXXXXXXXXXXCTIQDSTSSRNVSGFLAEVLVCKCKLCRSKVSVKTLCSSVGG 349
           R R               C++  +  S+N+ GF+A++ VC+CKLC SK  +K        
Sbjct: 176 RYRLHGPIESISPVSIVPCSV-GANKSKNLRGFIAQIRVCECKLCISKEPIKP------E 228

Query: 350 KNGYLFDVSVIVYFFESASSWHPVMSKLVGNVVSV 454
           +  ++F     VYFF S+ SWHPV++KLV  VV++
Sbjct: 229 QQTHVFTKPSFVYFFGSSMSWHPVITKLVRKVVTL 263


>sp|D0EL35.2|CTC1_ARATH RecName: Full=CST complex subunit CTC1; AltName: Full=Protein
           CONSERVED TELOMERE MAINTENANCE COMPONENT 1; Short=AtCTC1
          Length = 1272

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 57/153 (37%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
 Frame = +2

Query: 8   VLSWNFIPFKCGSNGLLEIIRWGFPDSVNTLTRCSNFDTFPLCLSSLRDEVLETRSRXXX 187
           VLSWNF+P    S G LEII W F DS + L+RCS   +FPL  S    +  + +SR   
Sbjct: 113 VLSWNFLPMN-HSGGFLEIINWKFVDSGSLLSRCSGISSFPLIPSLYSSQNGDRKSRYSV 171

Query: 188 XXXXXXXXXXXXCTIQD--STSSRNVSGFLAEVLVCKCKL-CRSKVSVKTLCSSVGGKNG 358
                           D  S+ S N+ GFL  V+ C+CK+  R  +             G
Sbjct: 172 CGVLESISPVSVVPCMDGVSSDSVNLPGFLVHVMACECKVYSRDAIDC-----------G 220

Query: 359 YLFDVSVIVYFFE-SASSWHPVMSKLVGNVVSV 454
           + F+ SV VYF    A+SWHPV+ KLVG  V++
Sbjct: 221 HAFERSVFVYFCGLEAASWHPVVMKLVGRNVAL 253


>gb|ACX37401.1| conserved telomere maintenance component 1 [Arabidopsis thaliana]
          Length = 1272

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 57/153 (37%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
 Frame = +2

Query: 8   VLSWNFIPFKCGSNGLLEIIRWGFPDSVNTLTRCSNFDTFPLCLSSLRDEVLETRSRXXX 187
           VLSWNF+P    S G LEII W F DS + L+RCS   +FPL  S    +  + +SR   
Sbjct: 113 VLSWNFLPMN-HSGGFLEIINWKFVDSGSLLSRCSGISSFPLIPSLYSSQNGDRKSRYSV 171

Query: 188 XXXXXXXXXXXXCTIQD--STSSRNVSGFLAEVLVCKCKL-CRSKVSVKTLCSSVGGKNG 358
                           D  S+ S N+ GFL  V+ C+CK+  R  +             G
Sbjct: 172 CGVLESISPVSVVPCMDGVSSDSVNLPGFLVHVMACECKVYSRDAIDC-----------G 220

Query: 359 YLFDVSVIVYFFE-SASSWHPVMSKLVGNVVSV 454
           + F+ SV VYF    A+SWHPV+ KLVG  V++
Sbjct: 221 HAFERSVFVYFCGLEAASWHPVVMKLVGRNVAL 253