BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011605
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285884.1| PREDICTED: NAD(P)H-quinone oxidoreductase su...   114   8e-24
ref|NP_001144688.1| uncharacterized protein LOC100277720 [Zea ma...   114   1e-23
gb|ACF84867.1| unknown [Zea mays] gi|414586087|tpg|DAA36658.1| T...   114   1e-23
ref|NP_001053435.1| Os04g0539000 [Oryza sativa Japonica Group] g...   112   4e-23
ref|XP_002446864.1| hypothetical protein SORBIDRAFT_06g023900 [S...   109   3e-22

>ref|XP_002285884.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic
           [Vitis vinifera] gi|209573123|sp|A7NVJ4.1|NDHM_VITVI
           RecName: Full=NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase I
           subunit M; Short=NDH-1 subunit M; Short=NDH-M; Flags:
           Precursor gi|302141757|emb|CBI18960.3| unnamed protein
           product [Vitis vinifera]
          Length = 208

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/63 (87%), Positives = 56/63 (88%)
 Frame = +2

Query: 215 QPMAKSKNMSVEYGGQWFSSVTRHVRIYAAYIDPVTHAFDQTQMDKLTLLLDPTNEFVWT 394
           Q   KSKNMS EYGGQW SSVTRHVRIYAAYIDPVT  FDQTQMDKLTL+LDPTNEFVWT
Sbjct: 72  QVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPTNEFVWT 131

Query: 395 SET 403
           SET
Sbjct: 132 SET 134


>ref|NP_001144688.1| uncharacterized protein LOC100277720 [Zea mays]
           gi|195645712|gb|ACG42324.1| hypothetical protein [Zea
           mays]
          Length = 210

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/63 (82%), Positives = 57/63 (90%)
 Frame = +2

Query: 212 RQPMAKSKNMSVEYGGQWFSSVTRHVRIYAAYIDPVTHAFDQTQMDKLTLLLDPTNEFVW 391
           RQP+A+SKNMS EYGGQW SS TRHVRIYAAYIDPVT+AFDQTQMDKLTL+LDP +EF W
Sbjct: 73  RQPLAESKNMSREYGGQWLSSTTRHVRIYAAYIDPVTNAFDQTQMDKLTLMLDPQDEFAW 132

Query: 392 TSE 400
           T E
Sbjct: 133 TDE 135


>gb|ACF84867.1| unknown [Zea mays] gi|414586087|tpg|DAA36658.1| TPA: hypothetical
           protein ZEAMMB73_095825 [Zea mays]
          Length = 210

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/63 (82%), Positives = 57/63 (90%)
 Frame = +2

Query: 212 RQPMAKSKNMSVEYGGQWFSSVTRHVRIYAAYIDPVTHAFDQTQMDKLTLLLDPTNEFVW 391
           RQP+A+SKNMS EYGGQW SS TRHVRIYAAYIDPVT+AFDQTQMDKLTL+LDP +EF W
Sbjct: 73  RQPLAESKNMSREYGGQWLSSTTRHVRIYAAYIDPVTNAFDQTQMDKLTLMLDPQDEFAW 132

Query: 392 TSE 400
           T E
Sbjct: 133 TDE 135


>ref|NP_001053435.1| Os04g0539000 [Oryza sativa Japonica Group]
           gi|75140217|sp|Q7FB12.1|NDHM_ORYSJ RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase I
           subunit M; Short=NDH-1 subunit M; Short=NDH-M; Flags:
           Precursor gi|209573107|sp|A2XVZ1.1|NDHM_ORYSI RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit M,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase I
           subunit M; Short=NDH-1 subunit M; Short=NDH-M; Flags:
           Precursor gi|21740425|emb|CAD41610.1| OSJNBa0091D06.25
           [Oryza sativa Japonica Group]
           gi|32488097|emb|CAE02779.1| OSJNBa0011L07.3 [Oryza
           sativa Japonica Group] gi|113565006|dbj|BAF15349.1|
           Os04g0539000 [Oryza sativa Japonica Group]
           gi|125549179|gb|EAY95001.1| hypothetical protein
           OsI_16809 [Oryza sativa Indica Group]
           gi|125591131|gb|EAZ31481.1| hypothetical protein
           OsJ_15617 [Oryza sativa Japonica Group]
           gi|215740545|dbj|BAG97201.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 220

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = +2

Query: 215 QPMAKSKNMSVEYGGQWFSSVTRHVRIYAAYIDPVTHAFDQTQMDKLTLLLDPTNEFVWT 394
           QP+A+SKNMS EYGGQW S  TRH+RIYAAYI+P T+AFDQTQMDKLTLLLDPT+EFVWT
Sbjct: 84  QPLAESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAFDQTQMDKLTLLLDPTDEFVWT 143

Query: 395 SET 403
            ET
Sbjct: 144 DET 146


>ref|XP_002446864.1| hypothetical protein SORBIDRAFT_06g023900 [Sorghum bicolor]
           gi|241938047|gb|EES11192.1| hypothetical protein
           SORBIDRAFT_06g023900 [Sorghum bicolor]
          Length = 218

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/63 (77%), Positives = 55/63 (87%)
 Frame = +2

Query: 212 RQPMAKSKNMSVEYGGQWFSSVTRHVRIYAAYIDPVTHAFDQTQMDKLTLLLDPTNEFVW 391
           RQP+A++KNMS EYGGQW S  TRHVRIYAAYIDPVT+ FDQTQMDKLTL+LDP +EF W
Sbjct: 81  RQPLAENKNMSREYGGQWLSCTTRHVRIYAAYIDPVTNVFDQTQMDKLTLMLDPQDEFAW 140

Query: 392 TSE 400
           T E
Sbjct: 141 TDE 143