BLASTX nr result
ID: Coptis24_contig00011594
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011594
(1089 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing... 160 2e-50
emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera] 160 2e-50
emb|CBI31217.3| unnamed protein product [Vitis vinifera] 160 2e-50
ref|XP_002439269.1| hypothetical protein SORBIDRAFT_09g003530 [S... 159 3e-50
ref|XP_003553340.1| PREDICTED: nucleolar MIF4G domain-containing... 149 4e-50
>ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing protein 1 [Vitis
vinifera]
Length = 700
Score = 160 bits (405), Expect(2) = 2e-50
Identities = 89/133 (66%), Positives = 96/133 (72%)
Frame = -1
Query: 399 SIGRITGAQIIS*EVLPSCSGGPRGNEQYXXXXXXXXXXXACLVGIDFSAKLIASLAKSF 220
S GR G+QIIS EVL SCSGGPRGNEQY ACLVGIDFSAKL+ASLAKSF
Sbjct: 241 SAGRRVGSQIISEEVLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKLLASLAKSF 300
Query: 219 EDEFMKEDXXXXXXXXXXXXXXXXFGVCSSDLIYDFLSILSKRLLEIDVSTILTILQCCG 40
EDE++KED F V +SDLIYDFL I SK+LLEIDVSTILTILQCCG
Sbjct: 301 EDEYIKEDNLSLRNLTLLLAYLYIFDVFASDLIYDFLIIRSKQLLEIDVSTILTILQCCG 360
Query: 39 MKLRGDDPSAMKD 1
MKLR DDP+AMKD
Sbjct: 361 MKLRRDDPAAMKD 373
Score = 66.2 bits (160), Expect(2) = 2e-50
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = -3
Query: 565 LTENVKYIAPHLRACARNESEEHTQICRHVRGLLSRLSETNVESITEEMSSIYRVINR 392
L +VKYIAPHLR+ A NE E+ QI R +RGLL+RLSE+NVESI EMS+I+ R
Sbjct: 187 LEGSVKYIAPHLRSRAGNELGEYHQIRRQIRGLLNRLSESNVESIAGEMSTIFHSAGR 244
>emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]
Length = 700
Score = 160 bits (405), Expect(2) = 2e-50
Identities = 89/133 (66%), Positives = 96/133 (72%)
Frame = -1
Query: 399 SIGRITGAQIIS*EVLPSCSGGPRGNEQYXXXXXXXXXXXACLVGIDFSAKLIASLAKSF 220
S GR G+QIIS EVL SCSGGPRGNEQY ACLVGIDFSAKL+ASLAKSF
Sbjct: 241 SAGRRVGSQIISEEVLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKLLASLAKSF 300
Query: 219 EDEFMKEDXXXXXXXXXXXXXXXXFGVCSSDLIYDFLSILSKRLLEIDVSTILTILQCCG 40
EDE++KED F V +SDLIYDFL I SK+LLEIDVSTILTILQCCG
Sbjct: 301 EDEYIKEDNLSLRNLTLLLAYLYIFDVFASDLIYDFLIIRSKQLLEIDVSTILTILQCCG 360
Query: 39 MKLRGDDPSAMKD 1
MKLR DDP+AMKD
Sbjct: 361 MKLRRDDPAAMKD 373
Score = 66.2 bits (160), Expect(2) = 2e-50
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = -3
Query: 565 LTENVKYIAPHLRACARNESEEHTQICRHVRGLLSRLSETNVESITEEMSSIYRVINR 392
L +VKYIAPHLR+ A NE E+ QI R +RGLL+RLSE+NVESI EMS+I+ R
Sbjct: 187 LEGSVKYIAPHLRSRAGNELGEYHQIRRQIRGLLNRLSESNVESIAGEMSTIFHSAGR 244
>emb|CBI31217.3| unnamed protein product [Vitis vinifera]
Length = 536
Score = 160 bits (405), Expect(2) = 2e-50
Identities = 89/133 (66%), Positives = 96/133 (72%)
Frame = -1
Query: 399 SIGRITGAQIIS*EVLPSCSGGPRGNEQYXXXXXXXXXXXACLVGIDFSAKLIASLAKSF 220
S GR G+QIIS EVL SCSGGPRGNEQY ACLVGIDFSAKL+ASLAKSF
Sbjct: 77 SAGRRVGSQIISEEVLASCSGGPRGNEQYAAVFAAFVAGMACLVGIDFSAKLLASLAKSF 136
Query: 219 EDEFMKEDXXXXXXXXXXXXXXXXFGVCSSDLIYDFLSILSKRLLEIDVSTILTILQCCG 40
EDE++KED F V +SDLIYDFL I SK+LLEIDVSTILTILQCCG
Sbjct: 137 EDEYIKEDNLSLRNLTLLLAYLYIFDVFASDLIYDFLIIRSKQLLEIDVSTILTILQCCG 196
Query: 39 MKLRGDDPSAMKD 1
MKLR DDP+AMKD
Sbjct: 197 MKLRRDDPAAMKD 209
Score = 66.2 bits (160), Expect(2) = 2e-50
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = -3
Query: 565 LTENVKYIAPHLRACARNESEEHTQICRHVRGLLSRLSETNVESITEEMSSIYRVINR 392
L +VKYIAPHLR+ A NE E+ QI R +RGLL+RLSE+NVESI EMS+I+ R
Sbjct: 23 LEGSVKYIAPHLRSRAGNELGEYHQIRRQIRGLLNRLSESNVESIAGEMSTIFHSAGR 80
>ref|XP_002439269.1| hypothetical protein SORBIDRAFT_09g003530 [Sorghum bicolor]
gi|241944554|gb|EES17699.1| hypothetical protein
SORBIDRAFT_09g003530 [Sorghum bicolor]
Length = 775
Score = 159 bits (403), Expect(2) = 3e-50
Identities = 85/133 (63%), Positives = 94/133 (70%)
Frame = -1
Query: 399 SIGRITGAQIIS*EVLPSCSGGPRGNEQYXXXXXXXXXXXACLVGIDFSAKLIASLAKSF 220
S+ R G+QII EVL SCS GPRGNEQY ACLVGIDFSAK++AS+AKSF
Sbjct: 311 SVPRSVGSQIIGDEVLASCSRGPRGNEQYAAVFAAFVAGMACLVGIDFSAKILASIAKSF 370
Query: 219 EDEFMKEDXXXXXXXXXXXXXXXXFGVCSSDLIYDFLSILSKRLLEIDVSTILTILQCCG 40
EDE+ KED FGV SSDL+YD LSILSKRL E+DVST+LTILQCCG
Sbjct: 371 EDEYSKEDGLSLRNLTLLFCYLCIFGVISSDLVYDLLSILSKRLTELDVSTVLTILQCCG 430
Query: 39 MKLRGDDPSAMKD 1
MKLRGDDP AMKD
Sbjct: 431 MKLRGDDPGAMKD 443
Score = 66.2 bits (160), Expect(2) = 3e-50
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = -3
Query: 550 KYIAPHLRACARNESEEHTQICRHVRGLLSRLSETNVESITEEMSSIYRVINRS 389
KY+ P LR + +ESEE TQ+ R VRGLL+RLSE+NVESIT+E+S+++R + RS
Sbjct: 262 KYVPPSLRNASNSESEEITQMRRRVRGLLNRLSESNVESITQEISTLFRSVPRS 315
>ref|XP_003553340.1| PREDICTED: nucleolar MIF4G domain-containing protein 1-like
[Glycine max]
Length = 794
Score = 149 bits (377), Expect(2) = 4e-50
Identities = 78/133 (58%), Positives = 90/133 (67%)
Frame = -1
Query: 399 SIGRITGAQIIS*EVLPSCSGGPRGNEQYXXXXXXXXXXXACLVGIDFSAKLIASLAKSF 220
S+ R +QI++ EVL SCS GPRGN+QY ACLVG+DFSAK +AS AK F
Sbjct: 335 SVARSVASQILTEEVLASCSSGPRGNQQYAAVFAAFVAGMACLVGVDFSAKFVASFAKCF 394
Query: 219 EDEFMKEDXXXXXXXXXXXXXXXXFGVCSSDLIYDFLSILSKRLLEIDVSTILTILQCCG 40
EDE+ KED FGVCSSDLIYDFL ++SKRL E DVS ILT+LQCCG
Sbjct: 395 EDEYNKEDNLSLRNLILLLSYLCIFGVCSSDLIYDFLVMVSKRLTEADVSIILTLLQCCG 454
Query: 39 MKLRGDDPSAMKD 1
MKLR DDP+AMKD
Sbjct: 455 MKLRADDPAAMKD 467
Score = 75.9 bits (185), Expect(2) = 4e-50
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = -3
Query: 550 KYIAPHLRACARNESEEHTQICRHVRGLLSRLSETNVESITEEMSSIYRVINRS 389
KYIAPHLRA A NE EEHTQI R VRGLL+RLSE+NVESIT E+S I++ + RS
Sbjct: 286 KYIAPHLRARAGNEPEEHTQIRRRVRGLLNRLSESNVESITGELSLIFQSVARS 339