BLASTX nr result

ID: Coptis24_contig00011592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011592
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39105.3| unnamed protein product [Vitis vinifera]              433   e-119
ref|XP_002322764.1| white-brown-complex ABC transporter family [...   426   e-117
ref|XP_002309268.1| white-brown-complex ABC transporter family [...   426   e-117
ref|XP_002524100.1| ATP-binding cassette transporter, putative [...   426   e-117
dbj|BAJ88390.1| predicted protein [Hordeum vulgare subsp. vulgare]    423   e-116

>emb|CBI39105.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score =  433 bits (1114), Expect = e-119
 Identities = 215/287 (74%), Positives = 244/287 (85%), Gaps = 1/287 (0%)
 Frame = -3

Query: 870  EKKKLMVPIPIDEDLKAKVFCPKREWGASWSEQFSILFCRGLKERRHDYLSWLRVTQVLV 691
            EKKKLM+PIPIDE+LK+KV  PKREWGASW EQ+SILF RGLKERRHDY SWLRVTQV  
Sbjct: 452  EKKKLMIPIPIDEELKSKVCSPKREWGASWWEQYSILFRRGLKERRHDYFSWLRVTQVAS 511

Query: 690  IALILGLLWWHSDSTTPRGLQDQAGLLFFIGVFWGFFPVFTAIFTFPQERAMLSKERAVD 511
             A ILGLLWW S+ST P+GLQDQAGLLFFI VFWGFFPVFTAIFTFPQERAMLSKERA D
Sbjct: 512  TATILGLLWWQSESTNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAAD 571

Query: 510  MYRLSAYFIARTTSXXXXXXXXXXXXXXVVYFMAGLKASADAFFLSMLTVFLSIVAAQGL 331
            MYRLSAYF+ARTTS              +VYFMAGL+  A +FFL+MLTVFL IVAAQGL
Sbjct: 572  MYRLSAYFVARTTSDLPLDLILPVLFLIIVYFMAGLRMDAGSFFLTMLTVFLCIVAAQGL 631

Query: 330  GLAIGATLMDIKKATTLASVTGMTFMLAGGYFIKDVPVFISWIRYLSFNFHTYRILLKIQ 151
            GLAIGATLMD+K+ATTLASVT MTFMLAGGYF+K VP+FISWIRY+SFN+HTY++LLK+Q
Sbjct: 632  GLAIGATLMDLKRATTLASVTVMTFMLAGGYFVKKVPIFISWIRYISFNYHTYKLLLKVQ 691

Query: 150  YQQVPP-VLGVKLGNCSREIGAMVAMVFGYRLLAYVSLRRMKL*SGA 13
            Y+ + P V G+K+    +E+ A+VAMVFGYRLLAY+SLRRMKL +GA
Sbjct: 692  YEHITPNVNGMKIDGGLKEVSALVAMVFGYRLLAYISLRRMKLHTGA 738


>ref|XP_002322764.1| white-brown-complex ABC transporter family [Populus trichocarpa]
            gi|222867394|gb|EEF04525.1| white-brown-complex ABC
            transporter family [Populus trichocarpa]
          Length = 744

 Score =  426 bits (1096), Expect = e-117
 Identities = 209/283 (73%), Positives = 242/283 (85%), Gaps = 1/283 (0%)
 Frame = -3

Query: 870  EKKKLMVPIPIDEDLKAKVFCPKREWGASWSEQFSILFCRGLKERRHDYLSWLRVTQVLV 691
            EKKKLMVPIP+DE++K+KV   KR+WGASW EQ++ILFCRG+KERRHDY SWLR+TQVL 
Sbjct: 460  EKKKLMVPIPLDEEVKSKVSSRKRQWGASWWEQYTILFCRGIKERRHDYFSWLRITQVLS 519

Query: 690  IALILGLLWWHSDSTTPRGLQDQAGLLFFIGVFWGFFPVFTAIFTFPQERAMLSKERAVD 511
             A+ILGLLWW SDS++P+GLQDQAGLLFFI VFWGFFPVFTAIFTFPQERAMLSKERA D
Sbjct: 520  TAIILGLLWWKSDSSSPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAAD 579

Query: 510  MYRLSAYFIARTTSXXXXXXXXXXXXXXVVYFMAGLKASADAFFLSMLTVFLSIVAAQGL 331
            MYRLSAYF+ARTTS              VVYFMAGL+ SA  FFL+MLTVFL IVAAQGL
Sbjct: 580  MYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSAAPFFLTMLTVFLCIVAAQGL 639

Query: 330  GLAIGATLMDIKKATTLASVTGMTFMLAGGYFIKDVPVFISWIRYLSFNFHTYRILLKIQ 151
            GLAIGATLMD+K+ATTLASVT MTFMLAGGYF+K VPVF+SWIRY+SFN+HTY++LLK+Q
Sbjct: 640  GLAIGATLMDLKRATTLASVTVMTFMLAGGYFVKKVPVFVSWIRYMSFNYHTYKLLLKVQ 699

Query: 150  YQQVPPVL-GVKLGNCSREIGAMVAMVFGYRLLAYVSLRRMKL 25
            Y+ + P + G+ +     E+ A+VAMVFGYRLLAY+SLRRMKL
Sbjct: 700  YEHMTPAINGIGIDGGLTEVSALVAMVFGYRLLAYISLRRMKL 742


>ref|XP_002309268.1| white-brown-complex ABC transporter family [Populus trichocarpa]
            gi|222855244|gb|EEE92791.1| white-brown-complex ABC
            transporter family [Populus trichocarpa]
          Length = 743

 Score =  426 bits (1096), Expect = e-117
 Identities = 210/283 (74%), Positives = 245/283 (86%), Gaps = 1/283 (0%)
 Frame = -3

Query: 870  EKKKLMVPIPIDEDLKAKVFCPKREWGASWSEQFSILFCRGLKERRHDYLSWLRVTQVLV 691
            EKKKLMVPIP+DE++KAKV   KR+WGASW +Q++ILFCRG+KERRHDY SWLR+TQVL 
Sbjct: 458  EKKKLMVPIPLDEEVKAKVSSLKRQWGASWWQQYTILFCRGIKERRHDYFSWLRITQVLS 517

Query: 690  IALILGLLWWHSDSTTPRGLQDQAGLLFFIGVFWGFFPVFTAIFTFPQERAMLSKERAVD 511
             A+ILGLLWW+SD+ + +GLQDQAGLLFFI VFWGFFPVFTAIFTFPQERAMLSKERA D
Sbjct: 518  TAIILGLLWWNSDTNSLKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAAD 577

Query: 510  MYRLSAYFIARTTSXXXXXXXXXXXXXXVVYFMAGLKASADAFFLSMLTVFLSIVAAQGL 331
            MYRLSAYF+ARTTS              VVYFMAGL+ SA  FFL+MLTVFLSI+AAQGL
Sbjct: 578  MYRLSAYFLARTTSDLPLDLVLPVLFLLVVYFMAGLRMSAAPFFLTMLTVFLSIIAAQGL 637

Query: 330  GLAIGATLMDIKKATTLASVTGMTFMLAGGYFIKDVPVFISWIRYLSFNFHTYRILLKIQ 151
            GLAIGATLMD+K+ATTLASVT MTFMLAGGYF+K VPVF+SWIRYLSFN+HTY++LLK+Q
Sbjct: 638  GLAIGATLMDLKRATTLASVTVMTFMLAGGYFVKRVPVFVSWIRYLSFNYHTYKLLLKVQ 697

Query: 150  YQQVPPVL-GVKLGNCSREIGAMVAMVFGYRLLAYVSLRRMKL 25
            Y+ + PVL G+++ +   E+ A+VAMVFGYRLLAY+SLRRMKL
Sbjct: 698  YKHMTPVLNGMRIDSGLTEVSALVAMVFGYRLLAYISLRRMKL 740


>ref|XP_002524100.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223536668|gb|EEF38310.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 749

 Score =  426 bits (1095), Expect = e-117
 Identities = 207/288 (71%), Positives = 243/288 (84%), Gaps = 1/288 (0%)
 Frame = -3

Query: 870  EKKKLMVPIPIDEDLKAKVFCPKREWGASWSEQFSILFCRGLKERRHDYLSWLRVTQVLV 691
            EKKK+MVPIP+DE++K KV  PKR WGASW +QF+IL CRG+KERRHDY SWLR+TQVL 
Sbjct: 462  EKKKIMVPIPLDEEVKLKVASPKRLWGASWWQQFTILLCRGIKERRHDYFSWLRITQVLS 521

Query: 690  IALILGLLWWHSDSTTPRGLQDQAGLLFFIGVFWGFFPVFTAIFTFPQERAMLSKERAVD 511
             A+ILGLLWW S+S + +GLQDQ+GLLFFI VFWGFFPVFTAIFTFPQERAML+KERA D
Sbjct: 522  TAVILGLLWWQSNSRSLKGLQDQSGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAAD 581

Query: 510  MYRLSAYFIARTTSXXXXXXXXXXXXXXVVYFMAGLKASADAFFLSMLTVFLSIVAAQGL 331
            MYRLSAYF+ARTTS              VVYFMAGL+ SA  FFLS+LTVFL IVAAQGL
Sbjct: 582  MYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRMSAGPFFLSLLTVFLCIVAAQGL 641

Query: 330  GLAIGATLMDIKKATTLASVTGMTFMLAGGYFIKDVPVFISWIRYLSFNFHTYRILLKIQ 151
            GLAIGATLMD+KKATTLASVT MTFMLAGGYF+K VP+F++WIRYLSFN+HTY++LLK+Q
Sbjct: 642  GLAIGATLMDLKKATTLASVTVMTFMLAGGYFVKKVPIFVAWIRYLSFNYHTYKLLLKVQ 701

Query: 150  YQQV-PPVLGVKLGNCSREIGAMVAMVFGYRLLAYVSLRRMKL*SGAY 10
            Y+ + PP+ G+++GN   E+ A+VAMVFGYRLLAY+SLR+MK   G Y
Sbjct: 702  YEDISPPINGIRIGNGVTEVSALVAMVFGYRLLAYISLRKMKFNCGVY 749


>dbj|BAJ88390.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 771

 Score =  423 bits (1087), Expect = e-116
 Identities = 207/287 (72%), Positives = 241/287 (83%), Gaps = 2/287 (0%)
 Frame = -3

Query: 870  EKKKLMVPIPIDEDLKAKVFCPKREWGASWSEQFSILFCRGLKERRHDYLSWLRVTQVLV 691
            EKKKL+ P+PI +D+KA +   KREWG +W +Q+SILFCRGLKERRHDYLSW+R+TQV+ 
Sbjct: 485  EKKKLLAPLPISDDMKATITSSKREWGTNWCQQYSILFCRGLKERRHDYLSWMRITQVIA 544

Query: 690  IALILGLLWWHSDSTTPRGLQDQAGLLFFIGVFWGFFPVFTAIFTFPQERAMLSKERAVD 511
             ++ILGLLWW SD TTP+GLQDQAGLLFFI VFWGFFPVFTAIFTFPQERAML+KERAVD
Sbjct: 545  TSIILGLLWWRSDPTTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAVD 604

Query: 510  MYRLSAYFIARTTSXXXXXXXXXXXXXXVVYFMAGLKASADAFFLSMLTVFLSIVAAQGL 331
            MY+LSAYF+ARTTS              +VYFMAGLKASA  FFLSMLTVFLSI+AAQGL
Sbjct: 605  MYKLSAYFLARTTSDLPLDLFLPVIFMVIVYFMAGLKASAMHFFLSMLTVFLSIIAAQGL 664

Query: 330  GLAIGATLMDIKKATTLASVTGMTFMLAGGYFIKDVPVFISWIRYLSFNFHTYRILLKIQ 151
            GLAIGATL+DIKKATTLASVT MTFMLAGG+F+K VP FISW+RYLSFN+HTYR+LLK+Q
Sbjct: 665  GLAIGATLLDIKKATTLASVTVMTFMLAGGFFVKRVPPFISWLRYLSFNYHTYRLLLKVQ 724

Query: 150  YQQVPPVL--GVKLGNCSREIGAMVAMVFGYRLLAYVSLRRMKL*SG 16
            Y  VP +L   V L N   E+GA+VAM+ GYR+LAY+SLRR+K  +G
Sbjct: 725  YDPVPDILMTSVPLDNGVTEVGALVAMIIGYRVLAYLSLRRVKASNG 771


Top