BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011583
         (1916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530130.1| ubiquitin-protein ligase, putative [Ricinus ...   208   5e-51
emb|CBI32926.3| unnamed protein product [Vitis vinifera]              207   6e-51
gb|AFK39287.1| unknown [Medicago truncatula]                          203   2e-49
emb|CAN66658.1| hypothetical protein VITISV_028354 [Vitis vinifera]   201   6e-49
ref|XP_002300427.1| predicted protein [Populus trichocarpa] gi|2...   198   5e-48

>ref|XP_002530130.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223530355|gb|EEF32246.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 420

 Score =  208 bits (529), Expect = 5e-51
 Identities = 126/307 (41%), Positives = 167/307 (54%), Gaps = 7/307 (2%)
 Frame = +1

Query: 241  MGNQFCKRRNTIEERFTRPQRLIRQPTNVDYXXXXXXXXXXXXAPCYDALEESIINSDLE 420
            MGN+  +RR  ++ER+TRPQ L     +VD+            APCY   +E    +D E
Sbjct: 1    MGNKLGRRRQVVDERYTRPQGLYVHK-DVDHKKLRKLILESKLAPCYPGDDE--FGNDHE 57

Query: 421  ECPICFFFYPSLNRSRCCSKGICTECFLQMNPSNAIRPAQCPFCKSSGYAVEYRGAKTQE 600
            ECPICF +YPSLNRSRCC KGICTECFLQM   N+ RP QCPFCK++ YAVEYRG KT+E
Sbjct: 58   ECPICFLYYPSLNRSRCCMKGICTECFLQMKNPNSTRPTQCPFCKTTNYAVEYRGVKTKE 117

Query: 601  EKGVEQAEEQKFIEAKIRMQFQESQTTD-------QITSVSQHLSPVEVQCPTDDSAQQI 759
            EKG+EQ EEQ+ IEAKIRM+ QE Q  +       +++S S  ++P EV+C +  + Q  
Sbjct: 118  EKGMEQIEEQRVIEAKIRMRQQELQDEEERMQKRLELSSSSSSIAPGEVECGS-AAVQSF 176

Query: 760  NGWVQDVGHLNMSLQGRGMEVSESPFPSSLNERHAEFGLNFDEVMLMEAIWXXXXXXXXX 939
               ++  G +      R         P     R  EF L+ +++M+MEAIW         
Sbjct: 177  RSPLEAEGSIPSQFSIRHP-------PHYRANRDDEFDLDLEDIMVMEAIW-LSIQENGR 228

Query: 940  XXXXXYAMGVSQQTYGLNQRVPYLVMTGDDEVPSSNSLTGGVAAAIATLAERNILQSETF 1119
                 Y    S + Y +     Y +        SS+S +GG+A AIA LAER     E+F
Sbjct: 229  QKNPIYTDAASSENYAVQGH--YALQAMPPVTESSSSPSGGLACAIAALAERQQTGGESF 286

Query: 1120 NSACERV 1140
                E V
Sbjct: 287  AHNNENV 293


>emb|CBI32926.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  207 bits (528), Expect = 6e-51
 Identities = 125/307 (40%), Positives = 173/307 (56%), Gaps = 15/307 (4%)
 Frame = +1

Query: 241  MGNQFCKRRNTIEERFTRPQRLIRQPTNVDYXXXXXXXXXXXXAPCYDALEESIINSDLE 420
            MGN+  +RR  +E+++TRPQ L  Q  +VD+            APCY   EE+   +D E
Sbjct: 1    MGNKLGRRRQVVEDKYTRPQGLY-QHKDVDHKKLRKLILDSKLAPCYPGDEEA--TNDFE 57

Query: 421  ECPICFFFYPSLNRSRCCSKGICTECFLQMNPSNAIRPAQCPFCKSSGYAVEYRGAKTQE 600
            ECPICF FYPSLNRSRCC+KGICTECFLQM   N+ RP QCP+CK++ YAVEYRG KT+E
Sbjct: 58   ECPICFLFYPSLNRSRCCTKGICTECFLQMKNPNSTRPTQCPYCKTANYAVEYRGVKTKE 117

Query: 601  EKGVEQAEEQKFIEAKIRMQFQESQTTD-------QITSVSQHLSPVEVQCPTDDSAQQI 759
            EKG+EQ EEQ+ IEAKIRM+ +E Q  +       +I+S S  L+  EV+  T       
Sbjct: 118  EKGMEQIEEQRVIEAKIRMRQKEIQDEEERMQKRQEISSSSSILAQGEVEYST------- 170

Query: 760  NGWVQDVGHLNMSLQGRGMEVSESPFPSSL--------NERHAEFGLNFDEVMLMEAIWX 915
                  V      ++G  ++ S+ P  +S+          R  EF L+ +++M+MEAIW 
Sbjct: 171  ----TAVPSFRSPVEGDEIDSSQDPRAASMIIQTLPPRQNRDEEFDLDLEDIMVMEAIW- 225

Query: 916  XXXXXXXXXXXXXYAMGVSQQTYGLNQRVPYLVMTGDDEVPSSNSLTGGVAAAIATLAER 1095
                         Y    + + Y   +   Y++     +V SS+S +GG+A AIA LAER
Sbjct: 226  LSIQDNGRHRNPLYGDTTTAEQYVTEEH--YVLPAMAPQVESSSSPSGGLACAIAALAER 283

Query: 1096 NILQSET 1116
              +  E+
Sbjct: 284  QQMGGES 290


>gb|AFK39287.1| unknown [Medicago truncatula]
          Length = 426

 Score =  203 bits (516), Expect = 2e-49
 Identities = 142/400 (35%), Positives = 201/400 (50%), Gaps = 31/400 (7%)
 Frame = +1

Query: 241  MGNQFCKRRNTIEERFTRPQRLIRQPTNVDYXXXXXXXXXXXXAPCYDALEESIINSDLE 420
            MGN+  +RR  ++E++TRPQ L     +VD             APCY   EE+ +  D E
Sbjct: 1    MGNKLGRRRQVVDEKYTRPQGLYNHK-DVDQKKLRKLILESKLAPCYPGDEETAV--DRE 57

Query: 421  ECPICFFFYPSLNRSRCCSKGICTECFLQMNPSNAIRPAQCPFCKSSGYAVEYRGAKTQE 600
            ECPICF +YPSLNRSRCC+K ICTECFLQM   N+ RP QCPFCK++ YAVEYRG K++E
Sbjct: 58   ECPICFLYYPSLNRSRCCTKSICTECFLQMKVPNSTRPTQCPFCKTANYAVEYRGVKSKE 117

Query: 601  EKGVEQAEEQKFIEAKIRMQFQESQTTD-------QITSVSQHLSPVEVQCPTDDSAQQI 759
            EKG+EQ EEQ+ IEAKIRM+ QE Q  +       +++S + +++  +V+  ++  A+  
Sbjct: 118  EKGMEQIEEQRVIEAKIRMRQQELQDEEERMHKRLEVSSSNVNVAVADVEYSSNAVAESS 177

Query: 760  NGWVQDVGHLNMSLQGRGMEVSESPFPSSLNERHAEFGLNFDEVMLMEAIWXXXXXXXXX 939
               ++      +S Q         P P++   R  EF ++ +++M+MEAIW         
Sbjct: 178  TSAIEH--DEIVSSQDSCATPMVRPPPATRANRDDEFDVDLEDIMVMEAIW-LSIQENGR 234

Query: 940  XXXXXYAMGVSQQTYGLNQRVPYLVMTGDDEVPSSNSLTGGVAAAIATLAERNILQSET- 1116
                 +A   S   Y  + R     M    E  SS S +GG+A AIA LAER  +  E+ 
Sbjct: 235  QRNLSFADATSGH-YVADDRYASSPMVQQAETSSSPSPSGGLACAIAALAERQQMSGESS 293

Query: 1117 ------------------FNSACERVQTSHIQDENYNE--HQSRLLSTLSHGASMLPMG- 1233
                              F +   R   S+   EN +E      + +T SHG   +  G 
Sbjct: 294  VSSNNENTSFNMLPGSRRFYNRIGRDMVSYSPTENLDEGPPDDTMATTRSHGQWSIDHGS 353

Query: 1234 -LATALDSELNDTMSEN-DCLTSCSTTEDNSWDSLSAHIP 1347
             +A    S  N    E+   L+S S + DN     SA  P
Sbjct: 354  QVAETATSYANSVEGEDRGELSSMSQSNDNDGSFQSATEP 393


>emb|CAN66658.1| hypothetical protein VITISV_028354 [Vitis vinifera]
          Length = 422

 Score =  201 bits (511), Expect = 6e-49
 Identities = 124/307 (40%), Positives = 172/307 (56%), Gaps = 15/307 (4%)
 Frame = +1

Query: 241  MGNQFCKRRNTIEERFTRPQRLIRQPTNVDYXXXXXXXXXXXXAPCYDALEESIINSDLE 420
            MGN+  +RR  +E+++TRPQ L  Q  +VD+            APCY   EE+   +D E
Sbjct: 1    MGNKLGRRRQVVEDKYTRPQGLY-QHKDVDHKKLRKLILDSKLAPCYPGDEEA--TNDFE 57

Query: 421  ECPICFFFYPSLNRSRCCSKGICTECFLQMNPSNAIRPAQCPFCKSSGYAVEYRGAKTQE 600
            ECPICF FYPSLNRSRCC+KGICTECFLQM   N+ RP  CP+CK++ YAVEYRG KT+E
Sbjct: 58   ECPICFLFYPSLNRSRCCTKGICTECFLQMKNPNSTRPT-CPYCKTANYAVEYRGVKTKE 116

Query: 601  EKGVEQAEEQKFIEAKIRMQFQESQTTD-------QITSVSQHLSPVEVQCPTDDSAQQI 759
            EKG+EQ EEQ+ IEAKIRM+ +E Q  +       +I+S S  L+  EV+  T       
Sbjct: 117  EKGMEQIEEQRVIEAKIRMRQKEIQDEEERMQKRQEISSSSSILAQGEVEYST------- 169

Query: 760  NGWVQDVGHLNMSLQGRGMEVSESPFPSSL--------NERHAEFGLNFDEVMLMEAIWX 915
                  V      ++G  ++ S+ P  +S+          R  EF L+ +++M+MEAIW 
Sbjct: 170  ----TAVPSFRSPVEGDEIDSSQDPRAASMIIQTLPPRQNRDEEFDLDLEDIMVMEAIW- 224

Query: 916  XXXXXXXXXXXXXYAMGVSQQTYGLNQRVPYLVMTGDDEVPSSNSLTGGVAAAIATLAER 1095
                         Y    + + Y   +   Y++     +V SS+S +GG+A AIA LAER
Sbjct: 225  LSIQDNGRHRNPLYGDTTTAEQYVTEEH--YVLPAMAPQVESSSSPSGGLACAIAALAER 282

Query: 1096 NILQSET 1116
              +  E+
Sbjct: 283  QQMGGES 289


>ref|XP_002300427.1| predicted protein [Populus trichocarpa] gi|222847685|gb|EEE85232.1|
            predicted protein [Populus trichocarpa]
          Length = 423

 Score =  198 bits (503), Expect = 5e-48
 Identities = 123/298 (41%), Positives = 163/298 (54%), Gaps = 13/298 (4%)
 Frame = +1

Query: 241  MGNQFCKRRNTIEERFTRPQRLIRQPTNVDYXXXXXXXXXXXXAPCYDALEESIINSDLE 420
            MGN+  +RR  ++ER+TRPQ L     +VD+            APC+   E+S   +D E
Sbjct: 1    MGNKLGRRRQVVDERYTRPQGLYVHK-DVDHKKLRKLILESKLAPCFPGDEDSC--NDHE 57

Query: 421  ECPICFFFYPSLNRSRCCSKGICTECFLQMNPSNAIRPAQCPFCKSSGYAVEYRGAKTQE 600
            ECPICF +YPSLNRSRCC KGICTECFLQM   N+ RP QCPFCK+S YAVEYRG KT+E
Sbjct: 58   ECPICFLYYPSLNRSRCCMKGICTECFLQMKNPNSTRPTQCPFCKTSNYAVEYRGVKTKE 117

Query: 601  EKGVEQAEEQKFIEAKIRMQFQESQTTDQ-------ITSVSQHLSPVEVQC-----PTDD 744
            EKG+EQ EEQ+ IEAKIRM+ QE Q  ++       ++S S ++ P E++C     P+D 
Sbjct: 118  EKGLEQIEEQRVIEAKIRMRQQELQDEEERMQKRLDVSSSSANIEPGELECGPTTVPSDT 177

Query: 745  SAQQINGWVQDVGHLNMSLQGRGMEVSESPFPSSLNERHAEFGLNFDEVMLMEAIW-XXX 921
            +  +    V               + S    P +   R  EF L+ +++M+MEAIW    
Sbjct: 178  TPVESGEIVSS-------------QYSSRRPPHAGANRDDEFDLDLEDIMVMEAIWLSIQ 224

Query: 922  XXXXXXXXXXXYAMGVSQQTYGLNQRVPYLVMTGDDEVPSSNSLTGGVAAAIATLAER 1095
                        A   +Q T       P +         SS+S +GG+A AIA LAER
Sbjct: 225  ENGRQKNPLCGDAAPPAQYTMEARYVTPAM---APPLAGSSSSPSGGLACAIAALAER 279