BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011564
         (1245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-contain...   346   8e-93
ref|XP_002331442.1| methyl binding domain protein [Populus trich...   335   2e-89
ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-contain...   306   5e-81
ref|XP_002308125.1| methyl binding domain protein [Populus trich...   304   3e-80
ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-contain...   303   6e-80

>ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-containing protein 2 [Vitis
            vinifera] gi|297736061|emb|CBI24099.3| unnamed protein
            product [Vitis vinifera]
          Length = 354

 Score =  346 bits (887), Expect = 8e-93
 Identities = 186/350 (53%), Positives = 226/350 (64%), Gaps = 20/350 (5%)
 Frame = -3

Query: 1099 QEKGQLAESSSPSRLEDTLEKPLNASLLGDDEEVELQIMEQENQSYDNGQNQLVLYNPEA 920
            +E+  L  SS P  L D L+ P++ S   ++EE      + +N SY+N  NQLV+Y+P A
Sbjct: 13   KEENDLTGSSLPRYL-DALQVPIDLSSSEEEEEDFYAEEDDDNHSYENTSNQLVVYDPVA 71

Query: 919  NGTVXXXXXXXXXXXXXXP----------SRVLPSVGAFTVQCASCFKWRLIPTKEKYEE 770
            N                            SRVLPSVGAFTVQCA+CFKWRLIPTKEKYEE
Sbjct: 72   NSATEVEPVPDPIQYRLPSFTGYSTTNAPSRVLPSVGAFTVQCANCFKWRLIPTKEKYEE 131

Query: 769  IRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPPQGWKRELRIRG 590
            IRE IL+ PFVCE AREWRP++SCDDPADISQDGSR+WAIDKPNI+QPP GW+R LRIRG
Sbjct: 132  IREHILEQPFVCETAREWRPNVSCDDPADISQDGSRLWAIDKPNIAQPPAGWQRLLRIRG 191

Query: 589  EGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQIPKPLQEDYVRK 410
            EGST+FADVYY+APSGKR RSMVE+QKYLL+HPEY+  GV +SQFSFQIPKPLQE+YVRK
Sbjct: 192  EGSTKFADVYYVAPSGKRLRSMVEVQKYLLEHPEYMVHGVTLSQFSFQIPKPLQENYVRK 251

Query: 409  RP----------RNEFSITRHLEPSDVNPLSWASPLNGSELQLGQPGMSATYEEPVLPKA 260
            RP               ++R LEP +VNPLSWA P    +LQL  PG+SA Y E      
Sbjct: 252  RPARVNAGSYDDTTSSGMSRPLEPGEVNPLSWAGPAECIDLQLRTPGLSAPYFE------ 305

Query: 259  PSGKKKASRSPSPLLPMIPLAGKKKARTPSKHKHKNHTPSNQPLIKVEEP 110
                       +P+   +    K+  RT  +  + ++   NQ  +KVEEP
Sbjct: 306  -----------APVFDPVSRPTKQARRTLPRDMYDSNMVYNQQKVKVEEP 344


>ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa]
            gi|222873656|gb|EEF10787.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 343

 Score =  335 bits (858), Expect = 2e-89
 Identities = 184/353 (52%), Positives = 228/353 (64%), Gaps = 11/353 (3%)
 Frame = -3

Query: 1135 ESNVRDASSIVKQEKGQLAESSSPSRLEDTLEKPLNASLLGDDEEVELQIMEQENQSYDN 956
            +S+  +   ++K+E      S     L  +L++P+  S   +++  +    + ++QS ++
Sbjct: 2    QSHPGETFHVLKKEGDDCTGSRYTGHLNSSLQEPIEVSSSSNEDNSD-DTWDIDDQSIED 60

Query: 955  GQNQLVLYNPEANGT---------VXXXXXXXXXXXXXXPSRVLPSVGAFTVQCASCFKW 803
               QLVLY+P AN           +              PSRVLPSVGAFTVQCA CFKW
Sbjct: 61   SSKQLVLYDPLANDAGEIEPVPQPILSHHPFRRYSDLNVPSRVLPSVGAFTVQCAKCFKW 120

Query: 802  RLIPTKEKYEEIRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPP 623
            RLIPTK+KYEE+RE IL+ PF CE AREWRPDISCDDP DI QDGSR+WAIDKPNI+QPP
Sbjct: 121  RLIPTKQKYEELREHILEEPFFCETAREWRPDISCDDPTDIDQDGSRLWAIDKPNIAQPP 180

Query: 622  QGWKRELRIRGEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQI 443
             GW+R LRIRGEGST+FADVYY APSGKR RSMVEIQKYL++HPEY+RDG+ ++QFSFQI
Sbjct: 181  PGWQRLLRIRGEGSTKFADVYYQAPSGKRLRSMVEIQKYLIEHPEYMRDGITLTQFSFQI 240

Query: 442  PKPLQEDYVR-KRPRNEFSITRHLEPSDVNPLSWASPLNGSELQLGQPGMSATYEEPVLP 266
            PKPLQE+YVR KRPR   S    LEP + NPL W  P + +ELQLG+P   A    P++ 
Sbjct: 241  PKPLQENYVRKKRPRLSASC---LEPGEANPLKWVGPGDCTELQLGRP---AILPPPLI- 293

Query: 265  KAPSGKKKASRSPSPLLPMI-PLAGKKKARTPSKHKHKNHTPSNQPLIKVEEP 110
                         S  LP   P+  KKKARTPSK  H+ +   N    KVEEP
Sbjct: 294  -----------QSSAYLPFYWPV--KKKARTPSKQSHRTNPVCNLDEPKVEEP 333


>ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
            [Cucumis sativus]
          Length = 342

 Score =  306 bits (785), Expect = 5e-81
 Identities = 174/366 (47%), Positives = 222/366 (60%), Gaps = 11/366 (3%)
 Frame = -3

Query: 1180 EASHLGDASKLGNDEESNVRDASSIVKQEKGQLAESSSPSRLEDTLEKPLNASLLGDDEE 1001
            E + L + S L ND+E+  +D  + V      L+ SSS + L +T  + +          
Sbjct: 5    EENDLNEPS-LSNDQETPRQDVIA-VSSSSSSLSSSSSENELHETRNENV---------- 52

Query: 1000 VELQIMEQENQSYDNGQNQLVLYNPEANG---------TVXXXXXXXXXXXXXXPSRVLP 848
                    ++QS DN   +LV+Y+P A+           V               SRVLP
Sbjct: 53   --------QSQSNDNPSRELVIYDPSADDGHANDPVSTPVKQQPSPVLGHLTPNSSRVLP 104

Query: 847  SVGAFTVQCASCFKWRLIPTKEKYEEIRESILQIPFVCEIAREWRPDISCDDPADISQDG 668
            SVGAFTVQCA CFKWRLIPTKEKYEEIRE +L+ PF CE AR WRPDISCDDPADI+QDG
Sbjct: 105  SVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDPADITQDG 164

Query: 667  SRVWAIDKPNISQPPQGWKRELRIRGEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPE 488
            SR+WAIDKPNI+QPP GW+R L IRGEGST+FADVYY APSGK+ RSMV+IQKYL++HPE
Sbjct: 165  SRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPE 224

Query: 487  YLRDGVNMSQFSFQIPKPLQEDYVRKR--PRNEFSITRHLEPSDVNPLSWASPLNGSELQ 314
            Y  +GV+M++FSFQIPKPL+EDYVRKR    N       LE  +V P+SWA P + + LQ
Sbjct: 225  YQTEGVSMTRFSFQIPKPLREDYVRKRRPNMNASCDASKLESGEVRPISWARPDDSTALQ 284

Query: 313  LGQPGMSATYEEPVLPKAPSGKKKASRSPSPLLPMIPLAGKKKARTPSKHKHKNHTPSNQ 134
            LG+PG++      +L  +P              P+   A K K     + +  + T +  
Sbjct: 285  LGKPGLT-----ELLSTSPVNN-----------PVTRPAKKVKRALAQEMRRSSLTSTEP 328

Query: 133  PLIKVE 116
            P IK+E
Sbjct: 329  PAIKLE 334


>ref|XP_002308125.1| methyl binding domain protein [Populus trichocarpa]
            gi|222854101|gb|EEE91648.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 328

 Score =  304 bits (779), Expect = 3e-80
 Identities = 161/318 (50%), Positives = 209/318 (65%), Gaps = 12/318 (3%)
 Frame = -3

Query: 1135 ESNVRDASSIVKQEKGQLAESSSPSRLEDTLEKPLNASLLGDDEEVELQIMEQENQSYDN 956
            +S   +   +VK+E     +S     L+ TL++P+  S   +D   +    + ++ S ++
Sbjct: 2    QSRPEETIRMVKKEADCCTDSCHTGHLQSTLQEPIEVSSSNEDNSHDTG--DIDDPSIED 59

Query: 955  GQNQLVLYNPEANGT---------VXXXXXXXXXXXXXXPSRVLPSVGAFTVQCASCFKW 803
               QLVLY+P  NG          +              PSRVLPSVG FTVQCA CFKW
Sbjct: 60   SSKQLVLYDPVTNGAGQIEPVPQPIQFQRPFRRYSDPNVPSRVLPSVGTFTVQCAKCFKW 119

Query: 802  RLIPTKEKYEEIRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPP 623
            RLIPTK+KYEE+RE IL+ PF CE AR WRPDISCDDP DI+QDGSR+WAIDKPNI+QPP
Sbjct: 120  RLIPTKKKYEELREHILEEPFFCETARGWRPDISCDDPTDITQDGSRLWAIDKPNIAQPP 179

Query: 622  QGWKRELRIRGEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQI 443
             GW+R LRIRGEGS++FADVYY +PSGKR RSMVE+QKYL++HPEY+  GV +SQFSFQI
Sbjct: 180  PGWQRLLRIRGEGSSKFADVYYQSPSGKRLRSMVEVQKYLIEHPEYMTYGVTLSQFSFQI 239

Query: 442  PKPLQEDYVRKRPRN---EFSITRHLEPSDVNPLSWASPLNGSELQLGQPGMSATYEEPV 272
            PKPLQE+YVRKR  +       TRHL+P +          + +ELQLG+P  S +++ PV
Sbjct: 240  PKPLQENYVRKRRPSISASCDYTRHLQPGEG---------DFTELQLGRPA-SPSFDRPV 289

Query: 271  LPKAPSGKKKASRSPSPL 218
              KA +  K+  R+ +P+
Sbjct: 290  KKKAGTQSKQDYRTANPV 307


>ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
            [Glycine max]
          Length = 309

 Score =  303 bits (776), Expect = 6e-80
 Identities = 162/301 (53%), Positives = 198/301 (65%), Gaps = 15/301 (4%)
 Frame = -3

Query: 1102 KQEKGQLAESSSPSRLEDTLEKPLNASLLGDDEEVELQIMEQENQSYDNGQNQLVLYNPE 923
            K E   L  SS  S    +L  P++ S   DDE          +   D+  NQLVLY+P 
Sbjct: 11   KNEVKDLTGSSLTSYKHSSLLDPIDVSSSSDDEN---------DLPNDDVSNQLVLYDPV 61

Query: 922  ANGT----------VXXXXXXXXXXXXXXPSRVLPSVGAFTVQCASCFKWRLIPTKEKYE 773
            ANG                            RVLPSVGAFTVQCASCFKWRLIPTKEKYE
Sbjct: 62   ANGNNAIELAPDPLQCEHPLLPRSKPSHSVPRVLPSVGAFTVQCASCFKWRLIPTKEKYE 121

Query: 772  EIRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPPQGWKRELRIR 593
            EIRE IL+ PFVC+ AREWRP +SCDDP DISQDGSRVWAIDKPNI+QPP GW+R LRIR
Sbjct: 122  EIREHILEQPFVCQKAREWRPHVSCDDPEDISQDGSRVWAIDKPNIAQPPAGWERLLRIR 181

Query: 592  GEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQIPKPLQEDYVR 413
             EGS++FAD+YY+APSGKR RSMVEIQK+L++HPEY RDGV +SQFSFQIP+PLQE+YVR
Sbjct: 182  AEGSSKFADIYYIAPSGKRLRSMVEIQKFLMEHPEYTRDGVTLSQFSFQIPRPLQENYVR 241

Query: 412  KRP---RNEFSITRHLEPSDVNPLSWASPL-NGSELQLGQPGMSATYE-EPVLPKAPSGK 248
            KRP    + + ++  +E   V+PL+W  P  +G  L L  P    +++ +P+    PS +
Sbjct: 242  KRPARLTSSYEVSEPVEHEQVSPLAWVDPEGHGRRLGLPAPPFMESHDIDPISISRPSKR 301

Query: 247  K 245
            +
Sbjct: 302  Q 302