BLASTX nr result
ID: Coptis24_contig00011546
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011546 (301 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus ... 80 2e-13 ref|XP_002308350.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 ref|XP_003533907.1| PREDICTED: F-box protein At3g58530-like [Gly... 72 6e-11 ref|XP_002876467.1| hypothetical protein ARALYDRAFT_486305 [Arab... 71 1e-10 ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vi... 71 1e-10 >ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223529238|gb|EEF31211.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 351 Score = 80.1 bits (196), Expect = 2e-13 Identities = 37/41 (90%), Positives = 38/41 (92%) Frame = -3 Query: 299 SRFCSNTLMTLDVNGCIGIKRRSRDELLQLFPHLICFKVHS 177 SR CSNT+ TLDVNGCIGIKRRSRDELLQLFPHL CFKVHS Sbjct: 311 SRSCSNTITTLDVNGCIGIKRRSRDELLQLFPHLRCFKVHS 351 >ref|XP_002308350.1| predicted protein [Populus trichocarpa] gi|222854326|gb|EEE91873.1| predicted protein [Populus trichocarpa] Length = 341 Score = 79.7 bits (195), Expect = 2e-13 Identities = 37/41 (90%), Positives = 38/41 (92%) Frame = -3 Query: 299 SRFCSNTLMTLDVNGCIGIKRRSRDELLQLFPHLICFKVHS 177 SRFCSNT+ TLDVNGCIGIKRRSRDELLQLFP L CFKVHS Sbjct: 301 SRFCSNTVTTLDVNGCIGIKRRSRDELLQLFPRLRCFKVHS 341 >ref|XP_003533907.1| PREDICTED: F-box protein At3g58530-like [Glycine max] Length = 353 Score = 71.6 bits (174), Expect = 6e-11 Identities = 32/41 (78%), Positives = 37/41 (90%) Frame = -3 Query: 299 SRFCSNTLMTLDVNGCIGIKRRSRDELLQLFPHLICFKVHS 177 S+ CSN + TLDVNGCIGIK+RSR+ELLQLFP+L CFKVHS Sbjct: 313 SKSCSNKITTLDVNGCIGIKKRSREELLQLFPYLKCFKVHS 353 >ref|XP_002876467.1| hypothetical protein ARALYDRAFT_486305 [Arabidopsis lyrata subsp. lyrata] gi|297322305|gb|EFH52726.1| hypothetical protein ARALYDRAFT_486305 [Arabidopsis lyrata subsp. lyrata] Length = 353 Score = 70.9 bits (172), Expect = 1e-10 Identities = 32/41 (78%), Positives = 36/41 (87%) Frame = -3 Query: 299 SRFCSNTLMTLDVNGCIGIKRRSRDELLQLFPHLICFKVHS 177 S+ CS +L TLDVNGCIGIKRRSR+ELLQ+FP L CFKVHS Sbjct: 313 SQTCSTSLTTLDVNGCIGIKRRSREELLQMFPRLTCFKVHS 353 >ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vinifera] Length = 353 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/41 (80%), Positives = 35/41 (85%) Frame = -3 Query: 299 SRFCSNTLMTLDVNGCIGIKRRSRDELLQLFPHLICFKVHS 177 SR CSN + TLDVNGCIGIK RSRDELLQ FP+L CFKVHS Sbjct: 313 SRSCSNMITTLDVNGCIGIKGRSRDELLQYFPYLRCFKVHS 353