BLASTX nr result
ID: Coptis24_contig00011542
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011542 (1818 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW62558.1| hypothetical protein ZEAMMB73_716887 [Zea mays] 62 5e-07 ref|YP_358581.1| hypothetical protein PhapfoPp032 [Phalaenopsis ... 62 7e-07 emb|CBI21459.3| unnamed protein product [Vitis vinifera] 58 1e-05 >gb|AFW62558.1| hypothetical protein ZEAMMB73_716887 [Zea mays] Length = 53 Score = 62.0 bits (149), Expect = 5e-07 Identities = 32/49 (65%), Positives = 36/49 (73%) Frame = +2 Query: 122 RTRTVELLGKTNQTSYLIFYPNDSNCFQDLKCIFFFLHWTPSSTNINIS 268 R RTV+LLGKT+QT Y Y NDSNCF+D CI FLHW SSTN+ IS Sbjct: 10 RIRTVDLLGKTDQTDY---YRNDSNCFKDPTCI--FLHWALSSTNVKIS 53 >ref|YP_358581.1| hypothetical protein PhapfoPp032 [Phalaenopsis aphrodite subsp. formosana] gi|58802836|gb|AAW82556.1| hypothetical protein [Phalaenopsis aphrodite subsp. formosana] Length = 103 Score = 61.6 bits (148), Expect = 7e-07 Identities = 33/53 (62%), Positives = 38/53 (71%) Frame = +2 Query: 110 IRAIRTRTVELLGKTNQTSYLIFYPNDSNCFQDLKCIFFFLHWTPSSTNINIS 268 IRAIRTRTV+LLGKT +T Y Y ND NCF+D CI LHW SST++ IS Sbjct: 56 IRAIRTRTVDLLGKTEKTYY---YRNDLNCFKDPTCI--LLHWALSSTDVKIS 103 >emb|CBI21459.3| unnamed protein product [Vitis vinifera] Length = 79 Score = 57.8 bits (138), Expect = 1e-05 Identities = 29/41 (70%), Positives = 32/41 (78%) Frame = +2 Query: 110 IRAIRTRTVELLGKTNQTSYLIFYPNDSNCFQDLKCIFFFL 232 IRAIRTRTV+LLGKT+QT Y Y ND NCF+D CIFF L Sbjct: 37 IRAIRTRTVDLLGKTDQTDY---YQNDLNCFKDPTCIFFAL 74