BLASTX nr result

ID: Coptis24_contig00011542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011542
         (1818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW62558.1| hypothetical protein ZEAMMB73_716887 [Zea mays]         62   5e-07
ref|YP_358581.1| hypothetical protein PhapfoPp032 [Phalaenopsis ...    62   7e-07
emb|CBI21459.3| unnamed protein product [Vitis vinifera]               58   1e-05

>gb|AFW62558.1| hypothetical protein ZEAMMB73_716887 [Zea mays]
          Length = 53

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 32/49 (65%), Positives = 36/49 (73%)
 Frame = +2

Query: 122 RTRTVELLGKTNQTSYLIFYPNDSNCFQDLKCIFFFLHWTPSSTNINIS 268
           R RTV+LLGKT+QT Y   Y NDSNCF+D  CI  FLHW  SSTN+ IS
Sbjct: 10  RIRTVDLLGKTDQTDY---YRNDSNCFKDPTCI--FLHWALSSTNVKIS 53


>ref|YP_358581.1| hypothetical protein PhapfoPp032 [Phalaenopsis aphrodite subsp.
           formosana] gi|58802836|gb|AAW82556.1| hypothetical
           protein [Phalaenopsis aphrodite subsp. formosana]
          Length = 103

 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = +2

Query: 110 IRAIRTRTVELLGKTNQTSYLIFYPNDSNCFQDLKCIFFFLHWTPSSTNINIS 268
           IRAIRTRTV+LLGKT +T Y   Y ND NCF+D  CI   LHW  SST++ IS
Sbjct: 56  IRAIRTRTVDLLGKTEKTYY---YRNDLNCFKDPTCI--LLHWALSSTDVKIS 103


>emb|CBI21459.3| unnamed protein product [Vitis vinifera]
          Length = 79

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +2

Query: 110 IRAIRTRTVELLGKTNQTSYLIFYPNDSNCFQDLKCIFFFL 232
           IRAIRTRTV+LLGKT+QT Y   Y ND NCF+D  CIFF L
Sbjct: 37  IRAIRTRTVDLLGKTDQTDY---YQNDLNCFKDPTCIFFAL 74


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