BLASTX nr result

ID: Coptis24_contig00011529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011529
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30455.3| unnamed protein product [Vitis vinifera]              406   e-111
ref|XP_002276415.1| PREDICTED: laccase-7 [Vitis vinifera]             406   e-111
ref|NP_001233816.1| laccase precursor [Solanum lycopersicum] gi|...   389   e-106
ref|XP_003529131.1| PREDICTED: laccase-7-like [Glycine max]           388   e-105
ref|XP_002308196.1| laccase 110a [Populus trichocarpa] gi|222854...   381   e-103

>emb|CBI30455.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score =  406 bits (1044), Expect = e-111
 Identities = 181/267 (67%), Positives = 215/267 (80%)
 Frame = -1

Query: 823 IVEHTFNVSNRAFRKVCGEQVKPVVNGSIPGPTIKACEGDTIVIHVINNSPYKITIHWHG 644
           +VEH+F+V N   R++C EQV   VNGS+PGPTI+  EGDT+V+HV N SPY +TIHWHG
Sbjct: 24  VVEHSFHVQNLTVRRLCHEQVITAVNGSLPGPTIRVREGDTLVVHVFNKSPYNLTIHWHG 83

Query: 643 VFQLFSGWADGPAYVTQCPIIPGTSYTYKFNVTKQEGTLWWHAHFSMLRETVYGALIIHP 464
           VFQL SGWADGP Y TQC I PG SYTYKF +T QEGTLWWHAH   LR TVYGALII P
Sbjct: 84  VFQLLSGWADGPVYATQCAIRPGHSYTYKFTITGQEGTLWWHAHVQWLRATVYGALIIRP 143

Query: 463 RRGHSYPFSKPYKEVPILLGEWWNANIVDIEQEFMTYGGEPMPSDAFTINGRPGDLYPCS 284
           R GH YPF KP+KE PI+LGEWWNAN++D+E E +  GG P  SDA+TING+PGDLYPCS
Sbjct: 144 RAGHKYPFPKPHKEYPIILGEWWNANVIDVENEGLASGGAPNISDAYTINGQPGDLYPCS 203

Query: 283 SNNTFKLKVVQGKTYLLRMINAAMSDHLFFKIAQHSFSVVAIDARYTEPYHTDVIVIAPG 104
             +T K+KVVQGKTYLLR+INAA+++  FFKIA+H   V+A+DA YTEPY TDV+VIAPG
Sbjct: 204 QKHTHKIKVVQGKTYLLRIINAALNNQFFFKIAKHKMKVIAVDASYTEPYVTDVVVIAPG 263

Query: 103 QSADVLFTANQPLGNYYMAAHPYTTTA 23
           Q+ D+L TA+Q LG+YYMAAHPY + A
Sbjct: 264 QTTDILLTADQSLGSYYMAAHPYASAA 290


>ref|XP_002276415.1| PREDICTED: laccase-7 [Vitis vinifera]
          Length = 565

 Score =  406 bits (1044), Expect = e-111
 Identities = 181/267 (67%), Positives = 215/267 (80%)
 Frame = -1

Query: 823 IVEHTFNVSNRAFRKVCGEQVKPVVNGSIPGPTIKACEGDTIVIHVINNSPYKITIHWHG 644
           +VEH+F+V N   R++C EQV   VNGS+PGPTI+  EGDT+V+HV N SPY +TIHWHG
Sbjct: 24  VVEHSFHVQNLTVRRLCHEQVITAVNGSLPGPTIRVREGDTLVVHVFNKSPYNLTIHWHG 83

Query: 643 VFQLFSGWADGPAYVTQCPIIPGTSYTYKFNVTKQEGTLWWHAHFSMLRETVYGALIIHP 464
           VFQL SGWADGP Y TQC I PG SYTYKF +T QEGTLWWHAH   LR TVYGALII P
Sbjct: 84  VFQLLSGWADGPVYATQCAIRPGHSYTYKFTITGQEGTLWWHAHVQWLRATVYGALIIRP 143

Query: 463 RRGHSYPFSKPYKEVPILLGEWWNANIVDIEQEFMTYGGEPMPSDAFTINGRPGDLYPCS 284
           R GH YPF KP+KE PI+LGEWWNAN++D+E E +  GG P  SDA+TING+PGDLYPCS
Sbjct: 144 RAGHKYPFPKPHKEYPIILGEWWNANVIDVENEGLASGGAPNISDAYTINGQPGDLYPCS 203

Query: 283 SNNTFKLKVVQGKTYLLRMINAAMSDHLFFKIAQHSFSVVAIDARYTEPYHTDVIVIAPG 104
             +T K+KVVQGKTYLLR+INAA+++  FFKIA+H   V+A+DA YTEPY TDV+VIAPG
Sbjct: 204 QKHTHKIKVVQGKTYLLRIINAALNNQFFFKIAKHKMKVIAVDASYTEPYVTDVVVIAPG 263

Query: 103 QSADVLFTANQPLGNYYMAAHPYTTTA 23
           Q+ D+L TA+Q LG+YYMAAHPY + A
Sbjct: 264 QTTDILLTADQSLGSYYMAAHPYASAA 290


>ref|NP_001233816.1| laccase precursor [Solanum lycopersicum]
           gi|170177495|gb|ACB10229.1| laccase [Solanum
           lycopersicum]
          Length = 572

 Score =  389 bits (999), Expect = e-106
 Identities = 177/267 (66%), Positives = 210/267 (78%)
 Frame = -1

Query: 823 IVEHTFNVSNRAFRKVCGEQVKPVVNGSIPGPTIKACEGDTIVIHVINNSPYKITIHWHG 644
           +VEH+F+V NR   ++C  QV   VNGS+PGP I+  EGDT+V+HV N SPY +TIHWHG
Sbjct: 28  VVEHSFHVQNRTITRLCRRQVITAVNGSLPGPAIRVNEGDTLVVHVYNLSPYNLTIHWHG 87

Query: 643 VFQLFSGWADGPAYVTQCPIIPGTSYTYKFNVTKQEGTLWWHAHFSMLRETVYGALIIHP 464
           VFQL SGWADGP + TQCPI PG SYTYKF +T QEGTLWWHAH S LR TV+GALII P
Sbjct: 88  VFQLLSGWADGPEFATQCPIRPGHSYTYKFRITGQEGTLWWHAHVSWLRATVHGALIIRP 147

Query: 463 RRGHSYPFSKPYKEVPILLGEWWNANIVDIEQEFMTYGGEPMPSDAFTINGRPGDLYPCS 284
           ++GHSYPF KP +EVPILLGEWWNAN+VD+E   +  G  P  SDA+TING PGDLYPCS
Sbjct: 148 KKGHSYPFPKPCREVPILLGEWWNANVVDVENAALATGSAPNNSDAYTINGWPGDLYPCS 207

Query: 283 SNNTFKLKVVQGKTYLLRMINAAMSDHLFFKIAQHSFSVVAIDARYTEPYHTDVIVIAPG 104
            N T+KLKV  GKTYLLR+INAA+++ LFFKIA H   VVA+DA YT+PY TDV+V  PG
Sbjct: 208 VNQTYKLKVKHGKTYLLRIINAALNNQLFFKIANHKMKVVAVDAAYTDPYVTDVVVTGPG 267

Query: 103 QSADVLFTANQPLGNYYMAAHPYTTTA 23
           Q+ DVL TA+Q   +YYMAA+PYT+ A
Sbjct: 268 QTTDVLLTADQLPASYYMAANPYTSAA 294


>ref|XP_003529131.1| PREDICTED: laccase-7-like [Glycine max]
          Length = 572

 Score =  388 bits (997), Expect = e-105
 Identities = 174/269 (64%), Positives = 217/269 (80%)
 Frame = -1

Query: 823 IVEHTFNVSNRAFRKVCGEQVKPVVNGSIPGPTIKACEGDTIVIHVINNSPYKITIHWHG 644
           +VE TF V N+  +++C E+V   VNG+ PGP I   EGDT+++H++N  PY ITIHWHG
Sbjct: 24  VVERTFKVQNKTIKRLCNERVIVTVNGTFPGPKINVREGDTVIVHLLNEGPYNITIHWHG 83

Query: 643 VFQLFSGWADGPAYVTQCPIIPGTSYTYKFNVTKQEGTLWWHAHFSMLRETVYGALIIHP 464
           VFQLFS WADGP YVTQC I PGT YTYKFNVT+QEGTLWWHAH S+LR TV+GA IIHP
Sbjct: 84  VFQLFSAWADGPEYVTQCTISPGTKYTYKFNVTQQEGTLWWHAHASVLRATVHGAFIIHP 143

Query: 463 RRGHSYPFSKPYKEVPILLGEWWNANIVDIEQEFMTYGGEPMPSDAFTINGRPGDLYPCS 284
           R G  +PF KP+K+VPI+LG+W++AN+VD+E + +  GG P  S+AFTING PGDL+ CS
Sbjct: 144 RSGQ-FPFPKPFKQVPIILGDWYDANVVDVETQALASGGPPNVSNAFTINGLPGDLFNCS 202

Query: 283 SNNTFKLKVVQGKTYLLRMINAAMSDHLFFKIAQHSFSVVAIDARYTEPYHTDVIVIAPG 104
              TFK+KV QGKTY+LRMINAA+++HLFFKIA H+F+VVA+DA YT+ Y T++IVIAPG
Sbjct: 203 RTQTFKMKVKQGKTYMLRMINAALNNHLFFKIANHTFTVVALDAAYTDHYITEIIVIAPG 262

Query: 103 QSADVLFTANQPLGNYYMAAHPYTTTAPM 17
           Q+ D LFTANQPLG+YYMAA PY+   P+
Sbjct: 263 QTIDALFTANQPLGSYYMAASPYSIGVPV 291


>ref|XP_002308196.1| laccase 110a [Populus trichocarpa] gi|222854172|gb|EEE91719.1|
           laccase 110a [Populus trichocarpa]
          Length = 562

 Score =  381 bits (978), Expect = e-103
 Identities = 175/267 (65%), Positives = 206/267 (77%)
 Frame = -1

Query: 823 IVEHTFNVSNRAFRKVCGEQVKPVVNGSIPGPTIKACEGDTIVIHVINNSPYKITIHWHG 644
           IVEH+F V N   R++C EQV   VNGS+PGPT++  EGDT+ +HV N SPY +T+HWHG
Sbjct: 24  IVEHSFYVKNLTVRRLCTEQVVTAVNGSLPGPTLRVQEGDTLKVHVFNKSPYNMTLHWHG 83

Query: 643 VFQLFSGWADGPAYVTQCPIIPGTSYTYKFNVTKQEGTLWWHAHFSMLRETVYGALIIHP 464
           VFQL S WADGP  VTQCPI PG  YTY+F + KQEGTLWWHAH S LR TVYGALII P
Sbjct: 84  VFQLLSAWADGPNMVTQCPIPPGGKYTYQFKLLKQEGTLWWHAHVSWLRATVYGALIIRP 143

Query: 463 RRGHSYPFSKPYKEVPILLGEWWNANIVDIEQEFMTYGGEPMPSDAFTINGRPGDLYPCS 284
           R GH YPF KP KEVPIL GEWWNAN+VD+E + +  G  P  SDAFTING PGDLYPCS
Sbjct: 144 RSGHPYPFPKPDKEVPILFGEWWNANVVDVENQALASGAAPNTSDAFTINGLPGDLYPCS 203

Query: 283 SNNTFKLKVVQGKTYLLRMINAAMSDHLFFKIAQHSFSVVAIDARYTEPYHTDVIVIAPG 104
            N  FKLKV +GKTYLLR+INAA+++ LFFKIA H+  VVA+DA YT PY T V+VI PG
Sbjct: 204 QNRIFKLKVQKGKTYLLRIINAALNNELFFKIANHNMKVVAVDAGYTVPYVTGVVVIGPG 263

Query: 103 QSADVLFTANQPLGNYYMAAHPYTTTA 23
           Q+ DVL  A+Q +G+YYMAA+ Y++ A
Sbjct: 264 QTVDVLLAADQEVGSYYMAANAYSSAA 290


Top