BLASTX nr result

ID: Coptis24_contig00011528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011528
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285461.1| PREDICTED: uncharacterized protein LOC100257...   193   2e-47
ref|XP_002510050.1| conserved hypothetical protein [Ricinus comm...   192   3e-47
ref|XP_002302388.1| predicted protein [Populus trichocarpa] gi|2...   191   9e-47
ref|XP_002893999.1| predicted protein [Arabidopsis lyrata subsp....   187   1e-45
ref|XP_004142905.1| PREDICTED: uncharacterized protein LOC101212...   186   2e-45

>ref|XP_002285461.1| PREDICTED: uncharacterized protein LOC100257450 [Vitis vinifera]
           gi|302142160|emb|CBI19363.3| unnamed protein product
           [Vitis vinifera]
          Length = 260

 Score =  193 bits (490), Expect = 2e-47
 Identities = 93/122 (76%), Positives = 99/122 (81%)
 Frame = -1

Query: 564 DVETLHTADPFIAGWFLSAYFLGGYGSDGTGMEGVSKAVTTAAKSWGVGIPLGLIIRGAT 385
           D ETL TADPFIAGW LSAYFLGGYG DG GM G+SKAV  AAKSW +GIPLGLIIR AT
Sbjct: 139 DFETLRTADPFIAGWTLSAYFLGGYGDDGRGMNGLSKAVLAAAKSWALGIPLGLIIRAAT 198

Query: 384 SGHIPPVKFVLVTMGATAVLLIGWRTLLFTALLKDKGKKNDTYKSGSPFELFELLTSLVR 205
           SGHIP   F+LVTMG+T  LLIGWR LLF+    DK KKND Y+ GSPFELFELLTSLVR
Sbjct: 199 SGHIPSSNFILVTMGSTGFLLIGWRALLFSIFPNDKSKKNDVYRRGSPFELFELLTSLVR 258

Query: 204 RW 199
           RW
Sbjct: 259 RW 260


>ref|XP_002510050.1| conserved hypothetical protein [Ricinus communis]
           gi|223550751|gb|EEF52237.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  192 bits (488), Expect = 3e-47
 Identities = 92/122 (75%), Positives = 99/122 (81%)
 Frame = -1

Query: 564 DVETLHTADPFIAGWFLSAYFLGGYGSDGTGMEGVSKAVTTAAKSWGVGIPLGLIIRGAT 385
           D ETL TADPF+AGWFL AYFLGGYG DG GM G SKAV  A KSW VGIPLGLIIR  T
Sbjct: 155 DFETLRTADPFVAGWFLGAYFLGGYGEDGRGMNGPSKAVIAAVKSWAVGIPLGLIIRAVT 214

Query: 384 SGHIPPVKFVLVTMGATAVLLIGWRTLLFTALLKDKGKKNDTYKSGSPFELFELLTSLVR 205
           SGHIPP  FVLVTMG+TAVLL+GWR LL + L  ++ KKND Y+ GSPFELFELLTSLVR
Sbjct: 215 SGHIPPYTFVLVTMGSTAVLLVGWRALLSSILPTNESKKNDVYRRGSPFELFELLTSLVR 274

Query: 204 RW 199
           RW
Sbjct: 275 RW 276


>ref|XP_002302388.1| predicted protein [Populus trichocarpa] gi|222844114|gb|EEE81661.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  191 bits (484), Expect = 9e-47
 Identities = 91/122 (74%), Positives = 97/122 (79%)
 Frame = -1

Query: 564 DVETLHTADPFIAGWFLSAYFLGGYGSDGTGMEGVSKAVTTAAKSWGVGIPLGLIIRGAT 385
           D ETL TADPFIAGWFL AYFLGGYG DG GM G+SKA   AAKSW  GIPLGLIIR A+
Sbjct: 141 DFETLRTADPFIAGWFLGAYFLGGYGEDGRGMNGLSKAAIAAAKSWATGIPLGLIIRAAS 200

Query: 384 SGHIPPVKFVLVTMGATAVLLIGWRTLLFTALLKDKGKKNDTYKSGSPFELFELLTSLVR 205
           SGH+PP  F LVTMG+T VLLIGWR LL   L  D+ KKND Y+ GSPFELFELLTSLVR
Sbjct: 201 SGHVPPSTFTLVTMGSTGVLLIGWRMLLSRVLSNDESKKNDVYRRGSPFELFELLTSLVR 260

Query: 204 RW 199
           RW
Sbjct: 261 RW 262


>ref|XP_002893999.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339841|gb|EFH70258.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 259

 Score =  187 bits (475), Expect = 1e-45
 Identities = 90/121 (74%), Positives = 101/121 (83%)
 Frame = -1

Query: 561 VETLHTADPFIAGWFLSAYFLGGYGSDGTGMEGVSKAVTTAAKSWGVGIPLGLIIRGATS 382
           +ETLHTADPFIAGWFLSAYFLGGY  +G GM+G SKAV  AAKSW VG PLG+IIR A+S
Sbjct: 139 IETLHTADPFIAGWFLSAYFLGGYAEEGRGMKGRSKAVVAAAKSWIVGAPLGIIIRSASS 198

Query: 381 GHIPPVKFVLVTMGATAVLLIGWRTLLFTALLKDKGKKNDTYKSGSPFELFELLTSLVRR 202
           GHIP   FVLVTMG+TAVLLIGWR LLF+ L  +  KK+DTY+ GS FELFELLTSL+RR
Sbjct: 199 GHIPASSFVLVTMGSTAVLLIGWRALLFSVLPTESKKKDDTYRKGSAFELFELLTSLIRR 258

Query: 201 W 199
           W
Sbjct: 259 W 259


>ref|XP_004142905.1| PREDICTED: uncharacterized protein LOC101212562 [Cucumis sativus]
           gi|449529905|ref|XP_004171938.1| PREDICTED:
           uncharacterized protein LOC101228828 [Cucumis sativus]
          Length = 260

 Score =  186 bits (472), Expect = 2e-45
 Identities = 86/122 (70%), Positives = 97/122 (79%)
 Frame = -1

Query: 564 DVETLHTADPFIAGWFLSAYFLGGYGSDGTGMEGVSKAVTTAAKSWGVGIPLGLIIRGAT 385
           D ETL TADPFIAGWFLSAYFLGGYG DG G+ G SKAV  A KSW +GIPLGL++R AT
Sbjct: 139 DFETLRTADPFIAGWFLSAYFLGGYGDDGRGINGYSKAVVAATKSWALGIPLGLLVRAAT 198

Query: 384 SGHIPPVKFVLVTMGATAVLLIGWRTLLFTALLKDKGKKNDTYKSGSPFELFELLTSLVR 205
           SGH+PP  F+ VTMG+TAVLLIGWR +L+        KKND Y+ G+PFELFELLTSLVR
Sbjct: 199 SGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVSNSKKNDVYRRGNPFELFELLTSLVR 258

Query: 204 RW 199
           RW
Sbjct: 259 RW 260


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