BLASTX nr result
ID: Coptis24_contig00011527
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011527 (728 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera] 373 e-101 emb|CAN59996.1| hypothetical protein VITISV_020887 [Vitis vinifera] 367 1e-99 gb|AEV42258.1| hypothetical protein [Beta vulgaris] 365 4e-99 gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum] 362 6e-98 gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 359 3e-97 >emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera] Length = 1495 Score = 373 bits (958), Expect = e-101 Identities = 179/242 (73%), Positives = 203/242 (83%) Frame = -2 Query: 727 GTSPISMISYRMAPLEMRELKSQLDELKRLGFIRQSQSPWGAPVLFVKKKDGSFRLCVDY 548 GT PIS+ YRMAPLE++ELK+QLDEL GFIR S SPWGAPVLFVKKKDG+ RLC+DY Sbjct: 629 GTDPISVSPYRMAPLELKELKTQLDELLGRGFIRPSTSPWGAPVLFVKKKDGTLRLCIDY 688 Query: 547 RKLNNVTIKNKYPLPRINDLFDQLRGAKYFSKIDLRTGYHQMRIREEDIQKTAFRTRLGH 368 RKLN VT+KNKYPLPRI+DLFDQL+GAKYFSKIDLRTGYHQ+R+REED+ KTAFRTR GH Sbjct: 689 RKLNRVTVKNKYPLPRIDDLFDQLKGAKYFSKIDLRTGYHQLRVREEDVSKTAFRTRYGH 748 Query: 367 FEFLVLPFGLTNAPAAFMDLMHRVMWKYLDQFVIVFINDILIYSKTRAEHKEHLRIVFQT 188 +EFLV+PFGLTNAPAAFMDLM+RV YLD FVIVF++DILIYS++ EHK+HL T Sbjct: 749 YEFLVMPFGLTNAPAAFMDLMNRVFRAYLDXFVIVFVDDILIYSRSLEEHKQHLVTTLGT 808 Query: 187 LVDHQLYAKFSKCEFWLNEMRFLGHVVSENGIKVDRSKIEAVNNWPRPTSATEIRSFLGL 8 L HQLY K K EFWL E+ FLGHVVSE GI VD SK+EAV W RPT+ E+RSFLGL Sbjct: 809 LRRHQLYGKLDKSEFWLTEVNFLGHVVSEAGIAVDHSKVEAVQEWQRPTNVFEVRSFLGL 868 Query: 7 AG 2 AG Sbjct: 869 AG 870 >emb|CAN59996.1| hypothetical protein VITISV_020887 [Vitis vinifera] Length = 701 Score = 367 bits (942), Expect = 1e-99 Identities = 176/242 (72%), Positives = 201/242 (83%) Frame = -2 Query: 727 GTSPISMISYRMAPLEMRELKSQLDELKRLGFIRQSQSPWGAPVLFVKKKDGSFRLCVDY 548 GT PIS+ YRMAPLE++ELK+QLDEL GFIR S SPWGAPVL VKKKDG+ RLC+DY Sbjct: 178 GTDPISVSPYRMAPLELKELKTQLDELLGKGFIRPSTSPWGAPVLSVKKKDGTLRLCIDY 237 Query: 547 RKLNNVTIKNKYPLPRINDLFDQLRGAKYFSKIDLRTGYHQMRIREEDIQKTAFRTRLGH 368 RKLN VT+KNKYPLPRI+DLFDQL+GAKYFSKIDLRTGYHQ+RIREE++ KTAFRTR GH Sbjct: 238 RKLNRVTVKNKYPLPRIDDLFDQLKGAKYFSKIDLRTGYHQLRIREENVSKTAFRTRYGH 297 Query: 367 FEFLVLPFGLTNAPAAFMDLMHRVMWKYLDQFVIVFINDILIYSKTRAEHKEHLRIVFQT 188 +EFLV+PFGLTN P AFMDLM+RV YLDQFVIVF++DILIYS++ EHK+HL +T Sbjct: 298 YEFLVMPFGLTNVPIAFMDLMNRVFRAYLDQFVIVFVDDILIYSRSLEEHKQHLVTTLKT 357 Query: 187 LVDHQLYAKFSKCEFWLNEMRFLGHVVSENGIKVDRSKIEAVNNWPRPTSATEIRSFLGL 8 L HQLY K K EFWL E+ FLGHVVSE GI VD SK+EAV W RPT+ E+RSFLGL Sbjct: 358 LRRHQLYGKLDKSEFWLTEVNFLGHVVSEAGIPVDHSKVEAVQEWQRPTNVFEVRSFLGL 417 Query: 7 AG 2 G Sbjct: 418 VG 419 >gb|AEV42258.1| hypothetical protein [Beta vulgaris] Length = 1553 Score = 365 bits (938), Expect = 4e-99 Identities = 171/242 (70%), Positives = 205/242 (84%) Frame = -2 Query: 727 GTSPISMISYRMAPLEMRELKSQLDELKRLGFIRQSQSPWGAPVLFVKKKDGSFRLCVDY 548 GT PIS +YRMAP EM ELK+QL+EL G+IR S SPWGAPVLFVKKKDGS RLC+DY Sbjct: 589 GTGPISKATYRMAPAEMNELKNQLEELLDKGYIRPSMSPWGAPVLFVKKKDGSLRLCIDY 648 Query: 547 RKLNNVTIKNKYPLPRINDLFDQLRGAKYFSKIDLRTGYHQMRIREEDIQKTAFRTRLGH 368 R+LNNVT+KNKYPLPRI+DLFDQL+GA FSKIDLR+GYHQ+RI + DI KTAFRTR GH Sbjct: 649 RELNNVTVKNKYPLPRIDDLFDQLQGAGMFSKIDLRSGYHQLRIVDHDIPKTAFRTRYGH 708 Query: 367 FEFLVLPFGLTNAPAAFMDLMHRVMWKYLDQFVIVFINDILIYSKTRAEHKEHLRIVFQT 188 +EF V+PFGLTNAPA FMDLM+R+ YLD+FV+VFI+DILIYSK + EH++HLR++ QT Sbjct: 709 YEFTVMPFGLTNAPAVFMDLMNRIFRPYLDKFVVVFIDDILIYSKNKEEHEDHLRVILQT 768 Query: 187 LVDHQLYAKFSKCEFWLNEMRFLGHVVSENGIKVDRSKIEAVNNWPRPTSATEIRSFLGL 8 L D+QLYAKFSKCEFWL + FLGH +S+ G+ VD +KI+AV+ WP P + T+IRSFLGL Sbjct: 769 LRDNQLYAKFSKCEFWLERVSFLGHFISKEGVLVDPAKIKAVSEWPTPKNVTDIRSFLGL 828 Query: 7 AG 2 AG Sbjct: 829 AG 830 >gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum] Length = 1554 Score = 362 bits (928), Expect = 6e-98 Identities = 175/241 (72%), Positives = 202/241 (83%) Frame = -2 Query: 724 TSPISMISYRMAPLEMRELKSQLDELKRLGFIRQSQSPWGAPVLFVKKKDGSFRLCVDYR 545 T PIS+ YRMAP E++ELK QL +L GFIR S SPWGAPVLFV+KKDGS R+C+DYR Sbjct: 741 THPISIPPYRMAPSELKELKEQLKDLLDKGFIRPSVSPWGAPVLFVRKKDGSLRMCIDYR 800 Query: 544 KLNNVTIKNKYPLPRINDLFDQLRGAKYFSKIDLRTGYHQMRIREEDIQKTAFRTRLGHF 365 +LN VTIKNKYPLPRI+DLF+QL+GA FSKIDLR+GYHQ+R+RE DI KTAFRTR GH+ Sbjct: 801 QLNKVTIKNKYPLPRIDDLFNQLQGATCFSKIDLRSGYHQLRVRECDIPKTAFRTRYGHY 860 Query: 364 EFLVLPFGLTNAPAAFMDLMHRVMWKYLDQFVIVFINDILIYSKTRAEHKEHLRIVFQTL 185 EFLV+ FGLTNAPAAFMDLM+RV YLD FVIVFI+DIL+YS+ +H HLR V QTL Sbjct: 861 EFLVMSFGLTNAPAAFMDLMNRVFKPYLDTFVIVFIDDILVYSRNEEDHASHLRTVLQTL 920 Query: 184 VDHQLYAKFSKCEFWLNEMRFLGHVVSENGIKVDRSKIEAVNNWPRPTSATEIRSFLGLA 5 D++LYAKFSKCEFWL + FLGH+VS +GIKVD KIEA+ NWPRPTS TEIRSFLGLA Sbjct: 921 KDNKLYAKFSKCEFWLKSVAFLGHIVSGDGIKVDTGKIEAMQNWPRPTSPTEIRSFLGLA 980 Query: 4 G 2 G Sbjct: 981 G 981 >gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum] Length = 1602 Score = 359 bits (922), Expect = 3e-97 Identities = 175/241 (72%), Positives = 200/241 (82%) Frame = -2 Query: 724 TSPISMISYRMAPLEMRELKSQLDELKRLGFIRQSQSPWGAPVLFVKKKDGSFRLCVDYR 545 T PIS+ YRMAP E++ELK L++ GFIR S SPWGAPVLFV+KKDGS R+C+DYR Sbjct: 666 TRPISIPPYRMAPAELKELKDLLEK----GFIRPSVSPWGAPVLFVRKKDGSLRICIDYR 721 Query: 544 KLNNVTIKNKYPLPRINDLFDQLRGAKYFSKIDLRTGYHQMRIREEDIQKTAFRTRLGHF 365 +LN VTIKNKYPLPRI+DLFDQL+GA FSKIDLR+GYHQ+R+RE DI KTAFRTR GH+ Sbjct: 722 QLNKVTIKNKYPLPRIDDLFDQLQGATCFSKIDLRSGYHQLRVRERDIPKTAFRTRYGHY 781 Query: 364 EFLVLPFGLTNAPAAFMDLMHRVMWKYLDQFVIVFINDILIYSKTRAEHKEHLRIVFQTL 185 EFLV+ FGLTNAPAAFMDLM+RV YLD FVI+FI+DILIYS+ +H HLR V QTL Sbjct: 782 EFLVMSFGLTNAPAAFMDLMNRVFRPYLDMFVIIFIDDILIYSRNEEDHASHLRTVLQTL 841 Query: 184 VDHQLYAKFSKCEFWLNEMRFLGHVVSENGIKVDRSKIEAVNNWPRPTSATEIRSFLGLA 5 D +LYAKFSKCEFWL + FLGH+VS +GIKVD KIEAV NWPRPTS TEIRSFLGLA Sbjct: 842 KDKELYAKFSKCEFWLKSVAFLGHIVSGDGIKVDTRKIEAVQNWPRPTSPTEIRSFLGLA 901 Query: 4 G 2 G Sbjct: 902 G 902