BLASTX nr result

ID: Coptis24_contig00011526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011526
         (1969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318115.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-15
ref|XP_002321680.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-15
ref|XP_002511234.1| conserved hypothetical protein [Ricinus comm...    89   6e-15
emb|CBI29439.3| unnamed protein product [Vitis vinifera]               88   7e-15
ref|XP_002271813.1| PREDICTED: uncharacterized protein LOC100249...    88   7e-15

>ref|XP_002318115.1| predicted protein [Populus trichocarpa] gi|222858788|gb|EEE96335.1|
            predicted protein [Populus trichocarpa]
          Length = 562

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 13/108 (12%)
 Frame = +3

Query: 987  KNNDRGWMSKCLTEDAKRYIDDFLSNVEDTDLILHYGE----SEAAGCSTR--------- 1127
            ++NDR  MSK LTE+A++Y +DF++NVEDTD+    GE    S   G  T+         
Sbjct: 360  RSNDRSRMSKRLTEEAEKYFEDFITNVEDTDISSLDGERSDTSSTLGGITKTETFRSPVI 419

Query: 1128 STSHPVEMDGVVLPWLQWETGNDGSPLLCKSKEEVSHIPKDISYGSLQ 1271
            S S PVEMDG+ LPWLQWET ND SPL  K+K E+   PK   + ++Q
Sbjct: 420  SKSRPVEMDGIALPWLQWETSNDASPLSIKNK-ELPSTPKSNLWDAVQ 466


>ref|XP_002321680.1| predicted protein [Populus trichocarpa] gi|222868676|gb|EEF05807.1|
            predicted protein [Populus trichocarpa]
          Length = 563

 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 49/96 (51%), Positives = 61/96 (63%), Gaps = 13/96 (13%)
 Frame = +3

Query: 987  KNNDRGWMSKCLTEDAKRYIDDFLSNVEDTDLILHYGE-----SEAAGCSTRST------ 1133
            ++NDR  MS+ LTE+A++Y +DF+SNVEDTD+    GE     S   G +   T      
Sbjct: 361  RSNDRSRMSERLTEEAEKYFEDFISNVEDTDISSLDGERSDTSSTLGGIAKTETFQRPVI 420

Query: 1134 --SHPVEMDGVVLPWLQWETGNDGSPLLCKSKEEVS 1235
              S PVEMDGV+LPWLQWET ND SPL  K+KE  S
Sbjct: 421  SKSQPVEMDGVLLPWLQWETSNDSSPLSLKNKELTS 456


>ref|XP_002511234.1| conserved hypothetical protein [Ricinus communis]
            gi|223550349|gb|EEF51836.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 543

 Score = 88.6 bits (218), Expect = 6e-15
 Identities = 56/120 (46%), Positives = 71/120 (59%), Gaps = 26/120 (21%)
 Frame = +3

Query: 987  KNNDRGWMSKCLTEDAKRYIDDFLSNVEDTDLILHYGE----SEAAGCSTR--------- 1127
            K++DR  MS  LTE+A++Y +DF+SNVEDTD+    GE    S + G  T+         
Sbjct: 340  KSSDRSRMSMRLTEEAEKYFEDFISNVEDTDISSLDGEMTDTSSSLGGITKTQVFQSPAL 399

Query: 1128 STSHPVEMDGVVLPWLQWETGNDGSPLLCKSKEEV----SHI---------PKDISYGSL 1268
            S S PVEMDGVVLPWLQWET ND SPLL +  E V    +H+          KD+SY S+
Sbjct: 400  SKSVPVEMDGVVLPWLQWETSNDASPLLSRKAELVATPKTHLWETAQEATPGKDLSYHSI 459


>emb|CBI29439.3| unnamed protein product [Vitis vinifera]
          Length = 794

 Score = 88.2 bits (217), Expect = 7e-15
 Identities = 53/122 (43%), Positives = 66/122 (54%), Gaps = 24/122 (19%)
 Frame = +3

Query: 987  KNNDRGWMSKCLTEDAKRYIDDFLSNVEDTDLILHYGESEAAGCSTRST----------- 1133
            ++NDR  MSK LTE+A++Y +DF+SNVEDTD+    GE  + G ST S            
Sbjct: 584  RSNDRNRMSKRLTEEAEKYFEDFISNVEDTDISSFDGE-RSDGSSTLSGITKPREPEKHS 642

Query: 1134 -------------SHPVEMDGVVLPWLQWETGNDGSPLLCKSKEEVSHIPKDISYGSLQV 1274
                         S P EMDG+VLPWLQWET ND SPL C  K +    PK + + S Q 
Sbjct: 643  REPEIFRSPAPSYSLPSEMDGLVLPWLQWETHNDSSPLSCNKKTKQPVTPKTLVWDSAQE 702

Query: 1275 HM 1280
             M
Sbjct: 703  GM 704


>ref|XP_002271813.1| PREDICTED: uncharacterized protein LOC100249354 [Vitis vinifera]
          Length = 572

 Score = 88.2 bits (217), Expect = 7e-15
 Identities = 53/122 (43%), Positives = 66/122 (54%), Gaps = 24/122 (19%)
 Frame = +3

Query: 987  KNNDRGWMSKCLTEDAKRYIDDFLSNVEDTDLILHYGESEAAGCSTRST----------- 1133
            ++NDR  MSK LTE+A++Y +DF+SNVEDTD+    GE  + G ST S            
Sbjct: 362  RSNDRNRMSKRLTEEAEKYFEDFISNVEDTDISSFDGE-RSDGSSTLSGITKPREPEKHS 420

Query: 1134 -------------SHPVEMDGVVLPWLQWETGNDGSPLLCKSKEEVSHIPKDISYGSLQV 1274
                         S P EMDG+VLPWLQWET ND SPL C  K +    PK + + S Q 
Sbjct: 421  REPEIFRSPAPSYSLPSEMDGLVLPWLQWETHNDSSPLSCNKKTKQPVTPKTLVWDSAQE 480

Query: 1275 HM 1280
             M
Sbjct: 481  GM 482


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