BLASTX nr result

ID: Coptis24_contig00011525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011525
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002459526.1| hypothetical protein SORBIDRAFT_02g006120 [S...   168   8e-40
gb|ACG38382.1| ubiquinol-cytochrome c reductase complex 14 kDa p...   168   8e-40
ref|XP_002872165.1| predicted protein [Arabidopsis lyrata subsp....   167   2e-39
ref|NP_197927.1| ubiquinol-cytochrome c reductase subunit 7 [Ara...   166   5e-39
gb|ACG26525.1| ubiquinol-cytochrome c reductase complex 14 kDa p...   165   7e-39

>ref|XP_002459526.1| hypothetical protein SORBIDRAFT_02g006120 [Sorghum bicolor]
           gi|241922903|gb|EER96047.1| hypothetical protein
           SORBIDRAFT_02g006120 [Sorghum bicolor]
          Length = 123

 Score =  168 bits (426), Expect = 8e-40
 Identities = 83/112 (74%), Positives = 95/112 (84%)
 Frame = -3

Query: 640 PEKNPLARMHKESVSRRLKHYGLRFEDLYDQKEDLDIKEALARLPREIVDARNQRLKRAM 461
           P +NPLAR+H+ +++ RL+ YGLR++DLYD   DLDIKEALARLPRE+VDARNQRLKRAM
Sbjct: 12  PRRNPLARLHRNAIASRLRKYGLRYDDLYDPYHDLDIKEALARLPREVVDARNQRLKRAM 71

Query: 460 DLSMKHEYLSDDLQARQTPFRSYLRDMLALVXXXXXXXEALGALPLYQRTIP 305
           DLSMKH+YL DD+QA QTPFRSYL DMLALV       EALGALPLYQRTIP
Sbjct: 72  DLSMKHKYLPDDVQAIQTPFRSYLSDMLALVKKESAEREALGALPLYQRTIP 123


>gb|ACG38382.1| ubiquinol-cytochrome c reductase complex 14 kDa protein [Zea mays]
           gi|195653093|gb|ACG46014.1| ubiquinol-cytochrome c
           reductase complex 14 kDa protein [Zea mays]
          Length = 123

 Score =  168 bits (426), Expect = 8e-40
 Identities = 84/112 (75%), Positives = 95/112 (84%)
 Frame = -3

Query: 640 PEKNPLARMHKESVSRRLKHYGLRFEDLYDQKEDLDIKEALARLPREIVDARNQRLKRAM 461
           P +NPLAR+H+ +V+ RL+ YGLR++DLYD   DLDIKEALARLPRE+VDARNQRLKRAM
Sbjct: 12  PRRNPLARLHRNAVASRLRKYGLRYDDLYDPYHDLDIKEALARLPREVVDARNQRLKRAM 71

Query: 460 DLSMKHEYLSDDLQARQTPFRSYLRDMLALVXXXXXXXEALGALPLYQRTIP 305
           DLSMKH+YL DD+QA QTPFRSYL DMLALV       EALGALPLYQRTIP
Sbjct: 72  DLSMKHQYLPDDVQAIQTPFRSYLFDMLALVKKESAEREALGALPLYQRTIP 123


>ref|XP_002872165.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318002|gb|EFH48424.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  167 bits (423), Expect = 2e-39
 Identities = 87/112 (77%), Positives = 94/112 (83%)
 Frame = -3

Query: 640 PEKNPLARMHKESVSRRLKHYGLRFEDLYDQKEDLDIKEALARLPREIVDARNQRLKRAM 461
           P KN LARMH +SVS RL+ YGLR++DLYD   DLDIKEAL RLPREIVDARNQRLKRAM
Sbjct: 11  PRKNFLARMHMKSVSNRLRRYGLRYDDLYDPLYDLDIKEALNRLPREIVDARNQRLKRAM 70

Query: 460 DLSMKHEYLSDDLQARQTPFRSYLRDMLALVXXXXXXXEALGALPLYQRTIP 305
           DLSMKHEYL D+LQA QTPFRSYL+D+LALV       EALGALPLYQRTIP
Sbjct: 71  DLSMKHEYLPDNLQAMQTPFRSYLQDILALVKRERAEREALGALPLYQRTIP 122


>ref|NP_197927.1| ubiquinol-cytochrome c reductase subunit 7 [Arabidopsis thaliana]
           gi|403399498|sp|F4JWS8.1|QCR72_ARATH RecName:
           Full=Cytochrome b-c1 complex subunit 7-2; AltName:
           Full=Complex III subunit VII gi|332006061|gb|AED93444.1|
           ubiquinol-cytochrome c reductase subunit 7 [Arabidopsis
           thaliana]
          Length = 122

 Score =  166 bits (419), Expect = 5e-39
 Identities = 87/112 (77%), Positives = 93/112 (83%)
 Frame = -3

Query: 640 PEKNPLARMHKESVSRRLKHYGLRFEDLYDQKEDLDIKEALARLPREIVDARNQRLKRAM 461
           P KN LARMH +SVS RL+ YGLR++DLYD   DLDIKEAL RLPREIVDARNQRL RAM
Sbjct: 11  PRKNFLARMHMKSVSNRLRRYGLRYDDLYDPLYDLDIKEALNRLPREIVDARNQRLMRAM 70

Query: 460 DLSMKHEYLSDDLQARQTPFRSYLRDMLALVXXXXXXXEALGALPLYQRTIP 305
           DLSMKHEYL D+LQA QTPFRSYL+DMLALV       EALGALPLYQRTIP
Sbjct: 71  DLSMKHEYLPDNLQAVQTPFRSYLQDMLALVKRERAEREALGALPLYQRTIP 122


>gb|ACG26525.1| ubiquinol-cytochrome c reductase complex 14 kDa protein [Zea mays]
          Length = 123

 Score =  165 bits (418), Expect = 7e-39
 Identities = 83/112 (74%), Positives = 94/112 (83%)
 Frame = -3

Query: 640 PEKNPLARMHKESVSRRLKHYGLRFEDLYDQKEDLDIKEALARLPREIVDARNQRLKRAM 461
           P +NPLAR+H+ +V+ RL+ YGLR++DLYD   DLDIKEALARLPRE+VDARNQRLKRAM
Sbjct: 12  PRRNPLARLHRNAVASRLRKYGLRYDDLYDPYHDLDIKEALARLPREVVDARNQRLKRAM 71

Query: 460 DLSMKHEYLSDDLQARQTPFRSYLRDMLALVXXXXXXXEALGALPLYQRTIP 305
           DLSMKH+YL DD+QA QTPFRSYL DMLALV       EALGALPLYQ TIP
Sbjct: 72  DLSMKHQYLPDDVQAIQTPFRSYLFDMLALVKKESAEREALGALPLYQITIP 123


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