BLASTX nr result

ID: Coptis24_contig00011518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011518
         (1254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521607.1| conserved hypothetical protein [Ricinus comm...   472   e-131
ref|XP_002310222.1| predicted protein [Populus trichocarpa] gi|2...   464   e-128
ref|XP_002327812.1| predicted protein [Populus trichocarpa] gi|2...   464   e-128
emb|CBI17534.3| unnamed protein product [Vitis vinifera]              463   e-128
ref|XP_002267318.1| PREDICTED: uncharacterized protein LOC100253...   460   e-127

>ref|XP_002521607.1| conserved hypothetical protein [Ricinus communis]
            gi|223539285|gb|EEF40878.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 478

 Score =  472 bits (1215), Expect = e-131
 Identities = 232/345 (67%), Positives = 271/345 (78%)
 Frame = -2

Query: 1253 CMIMGAAGSTVYYNLKLRHPTLDLPIIDYDLALLFQPMLMLGISIGVVFNIIFADWMVTI 1074
            CMIMGAAGSTVYYN++LRHPTLD+P+IDYDLALLFQPMLMLGISIGV FN++FADWMVT+
Sbjct: 133  CMIMGAAGSTVYYNMRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTV 192

Query: 1073 LLIILFVGTSTKALFKGIETWKEETIMKKEAANSLVSESKQNDDSRQDYTPLPSGPAALR 894
            LLIILF+GTSTKALFKGI+TWK+E++MKKEAA  L SESK ND   QDY PLPSGP AL 
Sbjct: 193  LLIILFIGTSTKALFKGIDTWKKESMMKKEAARQLESESKPNDGEGQDYKPLPSGPVALE 252

Query: 893  SDEVSLMDNVYWKDFMLLLFVWVSFLAIQLVKTYAEKCSVEYWILISLQVPIAVSVSLYE 714
             +E+SL  N+YWK+  LL++VWV FLA+Q+VK+Y   CSV YWIL +LQVPIA SV+L+E
Sbjct: 253  DEEISLFQNIYWKELALLVYVWVGFLAVQIVKSYVRTCSVAYWILNALQVPIAASVTLFE 312

Query: 713  AICLYKGNRVIASIGKETTNWKVHQLLLYCFCGITAXXXXXXXXXXXXXXXXXXXXXXGV 534
            AICL KG RVIAS GKE TNWK HQ+LLYC CGI A                      G+
Sbjct: 313  AICLRKGTRVIASRGKEITNWKYHQILLYCSCGIIAGMVGGLLGLGGGFILGPLFLELGI 372

Query: 533  PPQVXXXXXXXXXXXXXXXSVIQYYLLKRFPVPYAAYFVLVATIAAFTGQHIVRKLIMLL 354
            PPQV               SV+QYYLLKRFPVPYA +FVLVAT+AA  GQH+VRK+I +L
Sbjct: 373  PPQVASATSTFAMVFSSSMSVVQYYLLKRFPVPYATFFVLVATVAALVGQHVVRKIIAIL 432

Query: 353  GRASLIIFILALTIFVSAISLGGVGIANIVEKLVNHEHIGFESMC 219
            GRAS+IIFILALTIFVSAISLGGVGI ++VEKL N E++GFE++C
Sbjct: 433  GRASIIIFILALTIFVSAISLGGVGIVDMVEKLTNEEYMGFENLC 477


>ref|XP_002310222.1| predicted protein [Populus trichocarpa] gi|222853125|gb|EEE90672.1|
            predicted protein [Populus trichocarpa]
          Length = 454

 Score =  464 bits (1195), Expect = e-128
 Identities = 230/345 (66%), Positives = 271/345 (78%)
 Frame = -2

Query: 1253 CMIMGAAGSTVYYNLKLRHPTLDLPIIDYDLALLFQPMLMLGISIGVVFNIIFADWMVTI 1074
            CMIMGAAG+TVYYNL+LRHPTLD+PIIDYDLALLFQPMLMLGISIGV FN++FADWMVT+
Sbjct: 110  CMIMGAAGATVYYNLRLRHPTLDMPIIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTV 169

Query: 1073 LLIILFVGTSTKALFKGIETWKEETIMKKEAANSLVSESKQNDDSRQDYTPLPSGPAALR 894
            LLIILF+GTSTKALFKGI+TWK+E++MKKEAA  L SESK  D + ++Y PLPSGP  L 
Sbjct: 170  LLIILFIGTSTKALFKGIDTWKKESVMKKEAAKQLESESKPGDGAEEEYQPLPSGPVVLH 229

Query: 893  SDEVSLMDNVYWKDFMLLLFVWVSFLAIQLVKTYAEKCSVEYWILISLQVPIAVSVSLYE 714
             DEV L +N+ WK+  LL++VWV+FL +Q+V+T    CSV YWIL SLQVPIA SV+L+E
Sbjct: 230  DDEVPLRENIRWKELALLVYVWVAFLVVQIVQTNVPTCSVMYWILNSLQVPIAASVTLFE 289

Query: 713  AICLYKGNRVIASIGKETTNWKVHQLLLYCFCGITAXXXXXXXXXXXXXXXXXXXXXXGV 534
            AICL KG RVIAS GKE TNWK+HQ+LLYC CGI A                      G+
Sbjct: 290  AICLCKGTRVIASKGKEITNWKLHQVLLYCSCGIIAGIVGGLLGLGGGFILGPLFLELGI 349

Query: 533  PPQVXXXXXXXXXXXXXXXSVIQYYLLKRFPVPYAAYFVLVATIAAFTGQHIVRKLIMLL 354
            PPQV               SV++YYLL RFPVPYAAYFVLVATIAAF GQH++R++I +L
Sbjct: 350  PPQVASATSTFAMAFSSSMSVVEYYLLNRFPVPYAAYFVLVATIAAFAGQHVIRRIIAIL 409

Query: 353  GRASLIIFILALTIFVSAISLGGVGIANIVEKLVNHEHIGFESMC 219
            GRAS+IIFILALTIFVSAISLGGVGIAN+VEKL N E++GFE++C
Sbjct: 410  GRASIIIFILALTIFVSAISLGGVGIANMVEKLENDEYMGFENLC 454


>ref|XP_002327812.1| predicted protein [Populus trichocarpa] gi|222836897|gb|EEE75290.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  464 bits (1193), Expect = e-128
 Identities = 229/346 (66%), Positives = 268/346 (77%)
 Frame = -2

Query: 1253 CMIMGAAGSTVYYNLKLRHPTLDLPIIDYDLALLFQPMLMLGISIGVVFNIIFADWMVTI 1074
            CMIMGAAG+TVYYNL+LRHPTLD+P+IDYDL LLFQPMLMLGISIGV F+++FADWMVT+
Sbjct: 130  CMIMGAAGATVYYNLRLRHPTLDMPLIDYDLTLLFQPMLMLGISIGVSFSVMFADWMVTV 189

Query: 1073 LLIILFVGTSTKALFKGIETWKEETIMKKEAANSLVSESKQNDDSRQDYTPLPSGPAALR 894
            LLIILF+GTSTKALFKGI+TWK+ET+M+K+AA  L SESK  D + +DY PLPSGP  L 
Sbjct: 190  LLIILFIGTSTKALFKGIDTWKKETMMRKDAAKQLESESKPEDGAEEDYKPLPSGPVVLP 249

Query: 893  SDEVSLMDNVYWKDFMLLLFVWVSFLAIQLVKTYAEKCSVEYWILISLQVPIAVSVSLYE 714
             DEV L +N+YWK+  LL +VW  FL +Q+V+TY   CSV YWIL SLQVPIA SV+L+E
Sbjct: 250  DDEVPLRENIYWKEVALLFYVWAGFLVVQIVQTYFPTCSVTYWILNSLQVPIAASVTLFE 309

Query: 713  AICLYKGNRVIASIGKETTNWKVHQLLLYCFCGITAXXXXXXXXXXXXXXXXXXXXXXGV 534
            AICL KG RVIAS GKE TNWK+HQ+LLYC CGI A                      G+
Sbjct: 310  AICLCKGTRVIASKGKEITNWKLHQILLYCSCGIIAGMVGGLLGLGGGFILGPLFLELGI 369

Query: 533  PPQVXXXXXXXXXXXXXXXSVIQYYLLKRFPVPYAAYFVLVATIAAFTGQHIVRKLIMLL 354
            PPQV               SV++YYLL RFPVPYAAYF LVATI+AF GQH+VRK+I  L
Sbjct: 370  PPQVASATSTFAMAFSSSMSVVEYYLLNRFPVPYAAYFALVATISAFVGQHVVRKIIAFL 429

Query: 353  GRASLIIFILALTIFVSAISLGGVGIANIVEKLVNHEHIGFESMCQ 216
            GRASLIIFILALTIFVSA+SLGGVGIAN+VEKL N E++GFE++CQ
Sbjct: 430  GRASLIIFILALTIFVSAVSLGGVGIANMVEKLENEEYMGFENLCQ 475


>emb|CBI17534.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  463 bits (1192), Expect = e-128
 Identities = 229/346 (66%), Positives = 272/346 (78%), Gaps = 1/346 (0%)
 Frame = -2

Query: 1253 CMIMGAAGSTVYYNLKLRHPTLDLPIIDYDLALLFQPMLMLGISIGVVFNIIFADWMVTI 1074
            CMIMGAAGSTVYYN++LRHPTLD+PIIDYDLALLFQPMLMLGISIGV FN+IFADWMVT+
Sbjct: 133  CMIMGAAGSTVYYNMRLRHPTLDMPIIDYDLALLFQPMLMLGISIGVAFNVIFADWMVTV 192

Query: 1073 LLIILFVGTSTKALFKGIETWKEETIMKKEAANSLVSESKQNDDS-RQDYTPLPSGPAAL 897
            LLIILF+GTSTKALFKGIETWK+ETIMKKEAA  L +E+K  D++   DY PLPSGPA +
Sbjct: 193  LLIILFLGTSTKALFKGIETWKKETIMKKEAARLLEAETKPTDNTGGGDYRPLPSGPATI 252

Query: 896  RSDEVSLMDNVYWKDFMLLLFVWVSFLAIQLVKTYAEKCSVEYWILISLQVPIAVSVSLY 717
            R D V ++ N+ WK+  LL++VWV+FLA+Q+VKTY   CS+EYW+L  LQVPIA SVS+Y
Sbjct: 253  RDDHVPVIYNICWKELALLVYVWVAFLAVQIVKTYTVTCSIEYWVLNCLQVPIAASVSIY 312

Query: 716  EAICLYKGNRVIASIGKETTNWKVHQLLLYCFCGITAXXXXXXXXXXXXXXXXXXXXXXG 537
            EA+CLYKG RVIAS GKE TNWK+HQ+ LYC CGI A                      G
Sbjct: 313  EAVCLYKGTRVIASKGKEVTNWKIHQIFLYCSCGIVAGLVGGLLGLGGGFILGPLFLELG 372

Query: 536  VPPQVXXXXXXXXXXXXXXXSVIQYYLLKRFPVPYAAYFVLVATIAAFTGQHIVRKLIML 357
            +PPQV               SV+QY+LL+RFPVPYA+YFVLVATIAA  GQH+VRK+I L
Sbjct: 373  IPPQVASATSTFSMAFSSSMSVVQYHLLRRFPVPYASYFVLVATIAALVGQHVVRKVIKL 432

Query: 356  LGRASLIIFILALTIFVSAISLGGVGIANIVEKLVNHEHIGFESMC 219
            +GRAS+IIFILALTIF+SAISLGGVGI  +VEKL N+E++GF+ +C
Sbjct: 433  VGRASIIIFILALTIFISAISLGGVGIMTMVEKLANNEYMGFDDLC 478


>ref|XP_002267318.1| PREDICTED: uncharacterized protein LOC100253061 [Vitis vinifera]
          Length = 476

 Score =  460 bits (1184), Expect = e-127
 Identities = 228/345 (66%), Positives = 269/345 (77%)
 Frame = -2

Query: 1253 CMIMGAAGSTVYYNLKLRHPTLDLPIIDYDLALLFQPMLMLGISIGVVFNIIFADWMVTI 1074
            CMIMGAAGSTVYYN++LRHPTLD+PIIDYDLALLFQPMLMLGISIGV FN+IFADWMVT+
Sbjct: 133  CMIMGAAGSTVYYNMRLRHPTLDMPIIDYDLALLFQPMLMLGISIGVAFNVIFADWMVTV 192

Query: 1073 LLIILFVGTSTKALFKGIETWKEETIMKKEAANSLVSESKQNDDSRQDYTPLPSGPAALR 894
            LLIILF+GTSTKALFKGIETWK+ETIMKKEAA  L +E+K       DY PLPSGPA +R
Sbjct: 193  LLIILFLGTSTKALFKGIETWKKETIMKKEAARLLEAETKPTG----DYRPLPSGPATIR 248

Query: 893  SDEVSLMDNVYWKDFMLLLFVWVSFLAIQLVKTYAEKCSVEYWILISLQVPIAVSVSLYE 714
             D V ++ N+ WK+  LL++VWV+FLA+Q+VKTY   CS+EYW+L  LQVPIA SVS+YE
Sbjct: 249  DDHVPVIYNICWKELALLVYVWVAFLAVQIVKTYTVTCSIEYWVLNCLQVPIAASVSIYE 308

Query: 713  AICLYKGNRVIASIGKETTNWKVHQLLLYCFCGITAXXXXXXXXXXXXXXXXXXXXXXGV 534
            A+CLYKG RVIAS GKE TNWK+HQ+ LYC CGI A                      G+
Sbjct: 309  AVCLYKGTRVIASKGKEVTNWKIHQIFLYCSCGIVAGLVGGLLGLGGGFILGPLFLELGI 368

Query: 533  PPQVXXXXXXXXXXXXXXXSVIQYYLLKRFPVPYAAYFVLVATIAAFTGQHIVRKLIMLL 354
            PPQV               SV+QY+LL+RFPVPYA+YFVLVATIAA  GQH+VRK+I L+
Sbjct: 369  PPQVASATSTFSMAFSSSMSVVQYHLLRRFPVPYASYFVLVATIAALVGQHVVRKVIKLV 428

Query: 353  GRASLIIFILALTIFVSAISLGGVGIANIVEKLVNHEHIGFESMC 219
            GRAS+IIFILALTIF+SAISLGGVGI  +VEKL N+E++GF+ +C
Sbjct: 429  GRASIIIFILALTIFISAISLGGVGIMTMVEKLANNEYMGFDDLC 473


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