BLASTX nr result

ID: Coptis24_contig00011512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011512
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20133.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|NP_194452.1| NB-ARC domain-containing disease resistance pro...   125   4e-27
emb|CBI32910.3| unnamed protein product [Vitis vinifera]              125   4e-27
ref|XP_002262628.1| PREDICTED: disease resistance protein At4g27...   125   4e-27
emb|CBI24353.3| unnamed protein product [Vitis vinifera]              125   5e-27

>emb|CBI20133.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  128 bits (322), Expect = 4e-28
 Identities = 70/159 (44%), Positives = 106/159 (66%), Gaps = 6/159 (3%)
 Frame = +3

Query: 6   LPLAIITVGKAMRRKTNVKEWQLALIDLQERS--LNMAMGEEVIPSLRFSYDQLK-ENHQ 176
           LPLAI+T  K+MRR   + EW+ AL +L+ R+  L + M ++V   L FSY +LK E  +
Sbjct: 88  LPLAIVTTAKSMRRVRGIYEWRNALNELRGRTQGLTLNMEDDVFKILEFSYYRLKGEELR 147

Query: 177 KCFLYCALYPEDSEINTSELIEYWVLEGLV-KGRSKEEEILRGDVILDSLKGCCMLEDGS 353
           +C LYCAL+PED EI    LI+YW+ EG+V +  +++ E  +G  IL+ L+  C+LE   
Sbjct: 148 ECLLYCALFPEDYEIKRVSLIKYWIAEGMVGEMETRQAEFDKGHAILNKLENVCLLERCR 207

Query: 354 AKGYVKMHDLIRDMALYVTESNPKFMVRT--GLSEIPHE 464
              +VKMHD+I+DMA+ +++ N +FMV+T   L+E+P E
Sbjct: 208 NGKFVKMHDVIKDMAINISKRNSRFMVKTTRNLNELPSE 246


>ref|NP_194452.1| NB-ARC domain-containing disease resistance protein [Arabidopsis
           thaliana] gi|46395628|sp|O81825.1|DRL28_ARATH RecName:
           Full=Probable disease resistance protein At4g27220
           gi|3269283|emb|CAA19716.1| putative protein [Arabidopsis
           thaliana] gi|7269575|emb|CAB79577.1| putative protein
           [Arabidopsis thaliana] gi|91806732|gb|ABE66093.1|
           disease resistance protein [Arabidopsis thaliana]
           gi|332659912|gb|AEE85312.1| NB-ARC domain-containing
           disease resistance protein [Arabidopsis thaliana]
          Length = 919

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/159 (40%), Positives = 99/159 (62%), Gaps = 6/159 (3%)
 Frame = +3

Query: 6   LPLAIITVGKAMRRKTNVKEWQLALIDLQERSLNMAMGEEVIPSLRFSYDQLKENHQKCF 185
           LPLAIIT+G+ +R K  V+ W+  L  L+  + ++   E++  +L+ SYD L++N + CF
Sbjct: 308 LPLAIITIGRTLRGKPQVEVWKHTLNLLKRSAPSIDTEEKIFGTLKLSYDFLQDNMKSCF 367

Query: 186 LYCALYPEDSEINTSELIEYWVLEGLVKGRSKEEEIL-RGDVILDSLKGCCMLEDGSAKG 362
           L+CAL+PED  I  SELI YWV EGL+ G+   E+++  G  +++ LK  C+LEDG +  
Sbjct: 368 LFCALFPEDYSIKVSELIMYWVAEGLLDGQHHYEDMMNEGVTLVERLKDSCLLEDGDSCD 427

Query: 363 YVKMHDLIRDMALYVTESNPK-----FMVRTGLSEIPHE 464
            VKMHD++RD A++   S  +      M   GL E P +
Sbjct: 428 TVKMHDVVRDFAIWFMSSQGEGFHSLVMAGRGLIEFPQD 466


>emb|CBI32910.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  125 bits (314), Expect = 4e-27
 Identities = 68/154 (44%), Positives = 98/154 (63%), Gaps = 6/154 (3%)
 Frame = +3

Query: 6   LPLAIITVGKAMRRKTNVKEWQLALIDLQERSLNMAMG--EEVIPSLRFSYDQLKENHQK 179
           LPLAII +G +MR K  V+ W+ AL +LQ        G  ++V   L++SYD L  N + 
Sbjct: 183 LPLAIIVMGTSMREKKMVELWKDALSELQNSVPYNIKGIEDKVYKPLKWSYDSLGNNIKS 242

Query: 180 CFLYCALYPEDSEINTSELIEYWVLEGLVKGRSKEEEI-LRGDVILDSLKGCCMLEDGSA 356
           CFLYC+LYPED  I   EL++ W+ EGL+  +   ++I  RG  +++ LK CC+LEDG  
Sbjct: 243 CFLYCSLYPEDFSIEIRELVQCWLAEGLIDKQKNYDDIHNRGAAVVEYLKDCCLLEDGHL 302

Query: 357 KGYVKMHDLIRDMALYV---TESNPKFMVRTGLS 449
           K  VKMHD+IRD+A+++    E   K +VR+G+S
Sbjct: 303 KDTVKMHDVIRDVAIWIATSVEVKYKSLVRSGIS 336


>ref|XP_002262628.1| PREDICTED: disease resistance protein At4g27190-like [Vitis
           vinifera]
          Length = 1069

 Score =  125 bits (314), Expect = 4e-27
 Identities = 68/154 (44%), Positives = 98/154 (63%), Gaps = 6/154 (3%)
 Frame = +3

Query: 6   LPLAIITVGKAMRRKTNVKEWQLALIDLQERSLNMAMG--EEVIPSLRFSYDQLKENHQK 179
           LPLAII +G +MR K  V+ W+ AL +LQ        G  ++V   L++SYD L  N + 
Sbjct: 431 LPLAIIVMGTSMREKKMVELWKDALSELQNSVPYNIKGIEDKVYKPLKWSYDSLGNNIKS 490

Query: 180 CFLYCALYPEDSEINTSELIEYWVLEGLVKGRSKEEEI-LRGDVILDSLKGCCMLEDGSA 356
           CFLYC+LYPED  I   EL++ W+ EGL+  +   ++I  RG  +++ LK CC+LEDG  
Sbjct: 491 CFLYCSLYPEDFSIEIRELVQCWLAEGLIDKQKNYDDIHNRGAAVVEYLKDCCLLEDGHL 550

Query: 357 KGYVKMHDLIRDMALYV---TESNPKFMVRTGLS 449
           K  VKMHD+IRD+A+++    E   K +VR+G+S
Sbjct: 551 KDTVKMHDVIRDVAIWIATSVEVKYKSLVRSGIS 584


>emb|CBI24353.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  125 bits (313), Expect = 5e-27
 Identities = 70/160 (43%), Positives = 106/160 (66%), Gaps = 9/160 (5%)
 Frame = +3

Query: 6   LPLAIITVGKAMRRKTNVKEWQLALIDLQERSLNMAMG--EEVIPSLRFSYDQLK-ENHQ 176
           LPLAII +G +MR KT V+ W+ AL +LQ+       G  +EV   L++SYD L+ +N +
Sbjct: 339 LPLAIIVMGTSMRGKTMVELWEDALNELQQSLPCNIQGIEDEVYKPLKWSYDLLQGKNIK 398

Query: 177 KCFLYCALYPEDSEINTSELIEYWVLEGLVKGRSKEEEIL-RGDVILDSLKGCCMLEDGS 353
            CFLYC+L+PED  I  SEL++ W+ EGL+  +    +   R   ++++LK CC+LE G 
Sbjct: 399 SCFLYCSLFPEDFSIEISELVQCWLAEGLLDSQQNYRDAQNRALALIENLKNCCLLEPGD 458

Query: 354 AKGYVKMHDLIRDMALYVTES---NPKFMVRTG--LSEIP 458
           + G VKMHD++RD+A++++ S     KF+VR+G  L+EIP
Sbjct: 459 STGTVKMHDVVRDVAIWISSSLSDGCKFLVRSGIRLTEIP 498


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