BLASTX nr result

ID: Coptis24_contig00011508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011508
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC97238.1| En/Spm-like transposon protein [Arabidopsis thali...    51   2e-07
ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217...    49   6e-07
gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putati...    46   1e-05

>gb|AAC97238.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 781

 Score = 50.8 bits (120), Expect(2) = 2e-07
 Identities = 21/45 (46%), Positives = 30/45 (66%)
 Frame = +1

Query: 145 QCKLLNWVAPHELVVKGRWETDDPIKPVHGVPLADNTSKVWIEEV 279
           +CKL++      +V +GRW T+DP + VH VPL DN  KVW++ V
Sbjct: 702 KCKLMDITGKKRVVAEGRWATNDPKQKVHFVPLGDNVVKVWVDIV 746



 Score = 29.3 bits (64), Expect(2) = 2e-07
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 278 LLTYSKPRLWRENS*LQTMRDAKGTAIA*PTKHVIFT 388
           ++  S  ++WR +  ++ M DA GTAIA P   VI +
Sbjct: 745 IVKVSDVKVWRPSDEVEIMEDALGTAIAWPEDKVIMS 781


>ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217008 [Cucumis sativus]
          Length = 1163

 Score = 49.3 bits (116), Expect(2) = 6e-07
 Identities = 19/43 (44%), Positives = 28/43 (65%)
 Frame = +1

Query: 145  QCKLLNWVAPHELVVKGRWETDDPIKPVHGVPLADNTSKVWIE 273
            +CK+L+W    E+V +GRW ++DP   VH VPL     KVW++
Sbjct: 1080 KCKMLDWCGTGEVVAEGRWSSNDPKVIVHHVPLGPQAVKVWVD 1122



 Score = 28.9 bits (63), Expect(2) = 6e-07
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 302  LWRENS*LQTMRDAKGTAIA*PTKHVIFTYH 394
            LWR NS +  ++DA G+A+A P   V+ + +
Sbjct: 1131 LWRPNSEMHYIKDAVGSAVAWPLDKVVMSMY 1161


>gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 1431

 Score = 45.8 bits (107), Expect(2) = 1e-05
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = +1

Query: 145  QCKLLNWVAPHELVVKGRWETDDPIKPVHGVPLADNTSKVWIEEV 279
            +CKL++      ++ + RW T+DP + VH VPL DN  KVW++ V
Sbjct: 1352 KCKLMDITGKKRVMAERRWATNDPKQKVHFVPLDDNAVKVWVDIV 1396



 Score = 28.1 bits (61), Expect(2) = 1e-05
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 278  LLTYSKPRLWRENS*LQTMRDAKGTAIA*PTKHVIFT 388
            ++  S   +WR +  ++ M DA GTAIA P   VI +
Sbjct: 1395 IVKVSDVTVWRPSDEVEIMEDALGTAIAWPEDKVIMS 1431


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