BLASTX nr result
ID: Coptis24_contig00011496
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011496 (437 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2... 95 7e-18 ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|2... 88 6e-16 emb|CBI21155.3| unnamed protein product [Vitis vinifera] 87 1e-15 emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera] 87 1e-15 ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-co... 85 5e-15 >ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1| predicted protein [Populus trichocarpa] Length = 988 Score = 94.7 bits (234), Expect = 7e-18 Identities = 50/76 (65%), Positives = 56/76 (73%) Frame = -2 Query: 436 VVVYEYELKIGWDKSVSLPGQALPAPPLRQMAIRSKGVCLNISFQTFLLLLGATVILSGT 257 V+VYEYELKIGW KSV+LP QALPAPP QMAIRSK VC + +GATVILSG Sbjct: 254 VIVYEYELKIGWGKSVALPSQALPAPPPGQMAIRSKEVCYGFLPKP----IGATVILSGP 309 Query: 256 AGPPVASVTNQGFELI 209 +GPPV SV NQ EL+ Sbjct: 310 SGPPVTSVPNQNSELV 325 >ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|222865775|gb|EEF02906.1| predicted protein [Populus trichocarpa] Length = 955 Score = 88.2 bits (217), Expect = 6e-16 Identities = 49/76 (64%), Positives = 52/76 (68%) Frame = -2 Query: 436 VVVYEYELKIGWDKSVSLPGQALPAPPLRQMAIRSKGVCLNISFQTFLLLLGATVILSGT 257 VVVYEYELKIGW KSV+LP QALPAPP QMAIRSK GATVILSG Sbjct: 254 VVVYEYELKIGWGKSVALPSQALPAPPPGQMAIRSKE--------------GATVILSGP 299 Query: 256 AGPPVASVTNQGFELI 209 +GPPV SV NQ EL+ Sbjct: 300 SGPPVTSVPNQNSELV 315 >emb|CBI21155.3| unnamed protein product [Vitis vinifera] Length = 941 Score = 87.4 bits (215), Expect = 1e-15 Identities = 49/76 (64%), Positives = 51/76 (67%) Frame = -2 Query: 436 VVVYEYELKIGWDKSVSLPGQALPAPPLRQMAIRSKGVCLNISFQTFLLLLGATVILSGT 257 VVVYEYELKIGW KSVSLP QALPAPP MAIRSK GATVILSG Sbjct: 254 VVVYEYELKIGWGKSVSLPSQALPAPPPGHMAIRSKE--------------GATVILSGP 299 Query: 256 AGPPVASVTNQGFELI 209 +GPPV SV NQ EL+ Sbjct: 300 SGPPVTSVPNQNSELV 315 >emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera] Length = 1384 Score = 87.4 bits (215), Expect = 1e-15 Identities = 49/76 (64%), Positives = 51/76 (67%) Frame = -2 Query: 436 VVVYEYELKIGWDKSVSLPGQALPAPPLRQMAIRSKGVCLNISFQTFLLLLGATVILSGT 257 VVVYEYELKIGW KSVSLP QALPAPP MAIRSK GATVILSG Sbjct: 414 VVVYEYELKIGWGKSVSLPSQALPAPPPGHMAIRSKE--------------GATVILSGP 459 Query: 256 AGPPVASVTNQGFELI 209 +GPPV SV NQ EL+ Sbjct: 460 SGPPVTSVPNQNSELV 475 >ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like [Glycine max] Length = 972 Score = 85.1 bits (209), Expect = 5e-15 Identities = 47/76 (61%), Positives = 51/76 (67%) Frame = -2 Query: 436 VVVYEYELKIGWDKSVSLPGQALPAPPLRQMAIRSKGVCLNISFQTFLLLLGATVILSGT 257 VVVYEYELKIGW KSV+LP QALPAPP MAIRSK G+TVILSG Sbjct: 254 VVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKE--------------GSTVILSGP 299 Query: 256 AGPPVASVTNQGFELI 209 +GPPV SV NQ EL+ Sbjct: 300 SGPPVTSVPNQNSELV 315