BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011489
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]   338   2e-90
ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi...   337   3e-90
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   327   4e-87
emb|CBI36964.3| unnamed protein product [Vitis vinifera]              327   4e-87
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi...   298   2e-78

>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
          Length = 494

 Score =  338 bits (867), Expect = 2e-90
 Identities = 172/381 (45%), Positives = 245/381 (64%), Gaps = 2/381 (0%)
 Frame = +2

Query: 23   DAKAAETLNDWVEEGNIMXXXXXXXXXXXXXXXXXXXXAFQVMDWWRERGNDLSPGDHAI 202
            +   AETL+ WV+EG  +                    A Q+ +W  +  NDL+  D AI
Sbjct: 42   EGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYEWMEKSKNDLNNADRAI 101

Query: 203  HLDLLSKIEGVDAAEKYFERLPEHARNKLTYGALLHCYCKENMLEKAMTLLEKMRELNYA 382
             +DLL+K EG+  AE YF  L E A+   TYGALL+CYCKENM++KA+ L +K++ELN+ 
Sbjct: 102  RIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMVDKAVELFKKLKELNFV 161

Query: 383  STPLVYNNLMSMLVSMGKPGSVPPLITEMKNKGILPDIHTYTCLLDSYALLKDTKNAERV 562
            S+ L YNN++S+ + +G+P  VP L+ EM+ K I  D++TY  L++SYA +KD +  E+V
Sbjct: 162  SSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQV 221

Query: 563  LLEMKEAGVKCDWTTYTSLASIYVKEGLIDKANSALKEVENMDKFRDRKAYHILLTLYSA 742
            L +MK+ GV+ DW TY +LA+IYV  G   KAN AL+++E      D +A+ +L+ LY+ 
Sbjct: 222  LEKMKKRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEAFRMLINLYAR 281

Query: 743  ISNKLGVYQVWESLKLTFPETTNINYQFMLQALSRLGDTDGLEKYFEEWESSYTLYDIRL 922
             SN  GV + WESLKL  P+  N +Y  ML ALS+LGD  GLEK F+EWES  + YD+RL
Sbjct: 282  TSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRL 341

Query: 923  TNILIDSYLERDMIEEAEKLREDAVKKGAEPNVGTLMKFMRFYLHKHQMKLACKYFEEAT 1102
            +N++++SYL R+MIEEA  L E   K+G E  + TL  FM+FYL KHQ+ LA KY +   
Sbjct: 342  SNVMLESYLNREMIEEANLLSESIAKRGPELKLKTLDLFMKFYLKKHQLDLAMKYLDMGA 401

Query: 1103 LKV--KVNHWKASQETVSLFL 1159
             K   + N W  ++ET+++FL
Sbjct: 402  SKADPENNKWFPTEETITMFL 422


>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial [Vitis vinifera]
            gi|296089781|emb|CBI39600.3| unnamed protein product
            [Vitis vinifera]
          Length = 498

 Score =  337 bits (865), Expect = 3e-90
 Identities = 172/381 (45%), Positives = 245/381 (64%), Gaps = 2/381 (0%)
 Frame = +2

Query: 23   DAKAAETLNDWVEEGNIMXXXXXXXXXXXXXXXXXXXXAFQVMDWWRERGNDLSPGDHAI 202
            +   AETL+ WV+EG  +                    A Q+ +W  +  NDL+  D AI
Sbjct: 46   EGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYEWMEKSKNDLNNADRAI 105

Query: 203  HLDLLSKIEGVDAAEKYFERLPEHARNKLTYGALLHCYCKENMLEKAMTLLEKMRELNYA 382
             +DLL+K EG+  AE YF  L E A+   TYGALL+CYCKENML+KA+ L +K++ELN+ 
Sbjct: 106  RIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMLDKAVELFKKLKELNFV 165

Query: 383  STPLVYNNLMSMLVSMGKPGSVPPLITEMKNKGILPDIHTYTCLLDSYALLKDTKNAERV 562
            S+ L YNN++S+ + +G+P  VP L+ EM+ K I  D++TY  L++SYA +KD +  E+V
Sbjct: 166  SSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQV 225

Query: 563  LLEMKEAGVKCDWTTYTSLASIYVKEGLIDKANSALKEVENMDKFRDRKAYHILLTLYSA 742
            L +MK+ GV+ DW TY +LA+IYV  G   KAN AL+++E      D +A+ +L+ LY+ 
Sbjct: 226  LDKMKKRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEAFRMLINLYAR 285

Query: 743  ISNKLGVYQVWESLKLTFPETTNINYQFMLQALSRLGDTDGLEKYFEEWESSYTLYDIRL 922
             SN  GV + WESLKL  P+  N +Y  ML ALS+LGD  GLEK F+EWES  + YD+RL
Sbjct: 286  TSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRL 345

Query: 923  TNILIDSYLERDMIEEAEKLREDAVKKGAEPNVGTLMKFMRFYLHKHQMKLACKYFEEAT 1102
            +N++++SYL R++IEEA  L E   K+G E  + TL  FM+FYL KHQ+ LA KY +   
Sbjct: 346  SNVMLESYLNREIIEEANLLSESIAKRGPELKLKTLDLFMKFYLKKHQLDLAMKYLDMGA 405

Query: 1103 LKV--KVNHWKASQETVSLFL 1159
             K   + N W  ++ET+++FL
Sbjct: 406  SKADPENNKWFPTEETITMFL 426


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  327 bits (838), Expect = 4e-87
 Identities = 173/376 (46%), Positives = 235/376 (62%), Gaps = 1/376 (0%)
 Frame = +2

Query: 35   AETLNDWVEEGNIMXXXXXXXXXXXXXXXXXXXXAFQVMDWWRERGNDLSPGDHAIHLDL 214
            A+TLN+ ++EG ++                    A ++MDW   R    S  D+A+ LDL
Sbjct: 61   ADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRKIFFSYADYAVRLDL 120

Query: 215  LSKIEGVDAAEKYFERLPEHARNKLTYGALLHCYCKENMLEKAMTLLEKMRELNYASTPL 394
            LSK +G+  AE+YF  L   A+N LTYG LL+CYCKE M EKA+ L EKM ELN+AST L
Sbjct: 121  LSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSL 180

Query: 395  VYNNLMSMLVSMGKPGSVPPLITEMKNKGILPDIHTYTCLLDSYALLKDTKNAERVLLEM 574
             +NNLMS+ + +GKP  VPPL+ EMK + I PD  TY  L+ SYA L D + AERVL E+
Sbjct: 181  TFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEI 240

Query: 575  K-EAGVKCDWTTYTSLASIYVKEGLIDKANSALKEVENMDKFRDRKAYHILLTLYSAISN 751
            K E   K  WTTY++LA++YV   L +KA  ALK++E    F DR AYH L++LY+ I+N
Sbjct: 241  KRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINN 300

Query: 752  KLGVYQVWESLKLTFPETTNINYQFMLQALSRLGDTDGLEKYFEEWESSYTLYDIRLTNI 931
               V +VW SLK  FP+T N++Y  MLQAL+ L D DGL+  FEEW+SS   +D+RL N+
Sbjct: 301  LSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANV 360

Query: 932  LIDSYLERDMIEEAEKLREDAVKKGAEPNVGTLMKFMRFYLHKHQMKLACKYFEEATLKV 1111
             + ++L  DMI++AE +  +AVK+ + P    L  FM  +L   ++  A KY E A  +V
Sbjct: 361  AVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEAAASEV 420

Query: 1112 KVNHWKASQETVSLFL 1159
            K N W+ + E V  FL
Sbjct: 421  KNNEWQPAPERVLAFL 436


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  327 bits (838), Expect = 4e-87
 Identities = 173/376 (46%), Positives = 235/376 (62%), Gaps = 1/376 (0%)
 Frame = +2

Query: 35   AETLNDWVEEGNIMXXXXXXXXXXXXXXXXXXXXAFQVMDWWRERGNDLSPGDHAIHLDL 214
            A+TLN+ ++EG ++                    A ++MDW   R    S  D+A+ LDL
Sbjct: 100  ADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRKIFFSYADYAVRLDL 159

Query: 215  LSKIEGVDAAEKYFERLPEHARNKLTYGALLHCYCKENMLEKAMTLLEKMRELNYASTPL 394
            LSK +G+  AE+YF  L   A+N LTYG LL+CYCKE M EKA+ L EKM ELN+AST L
Sbjct: 160  LSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSL 219

Query: 395  VYNNLMSMLVSMGKPGSVPPLITEMKNKGILPDIHTYTCLLDSYALLKDTKNAERVLLEM 574
             +NNLMS+ + +GKP  VPPL+ EMK + I PD  TY  L+ SYA L D + AERVL E+
Sbjct: 220  TFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEI 279

Query: 575  K-EAGVKCDWTTYTSLASIYVKEGLIDKANSALKEVENMDKFRDRKAYHILLTLYSAISN 751
            K E   K  WTTY++LA++YV   L +KA  ALK++E    F DR AYH L++LY+ I+N
Sbjct: 280  KRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINN 339

Query: 752  KLGVYQVWESLKLTFPETTNINYQFMLQALSRLGDTDGLEKYFEEWESSYTLYDIRLTNI 931
               V +VW SLK  FP+T N++Y  MLQAL+ L D DGL+  FEEW+SS   +D+RL N+
Sbjct: 340  LSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANV 399

Query: 932  LIDSYLERDMIEEAEKLREDAVKKGAEPNVGTLMKFMRFYLHKHQMKLACKYFEEATLKV 1111
             + ++L  DMI++AE +  +AVK+ + P    L  FM  +L   ++  A KY E A  +V
Sbjct: 400  AVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEAAASEV 459

Query: 1112 KVNHWKASQETVSLFL 1159
            K N W+ + E V  FL
Sbjct: 460  KNNEWQPAPERVLAFL 475


>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like
            [Glycine max]
          Length = 490

 Score =  298 bits (762), Expect = 2e-78
 Identities = 158/344 (45%), Positives = 215/344 (62%), Gaps = 3/344 (0%)
 Frame = +2

Query: 137  AFQVMDWWRERGNDLSPGDHAIHLDLLSKIEGVDAAEKYFERLPEHARNKLTYGALLHCY 316
            A ++ +   +R    +  DHAIHLDLL+K  G+ AAE YF  LPE ++N L YGALL+CY
Sbjct: 74   ALKLSETMAKRNMIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPSKNHLCYGALLNCY 133

Query: 317  CKENMLEKAMTLLEKMRELNYASTPLVYNNLMSMLVSMGKPGSVPPLITEMKNKGILPDI 496
            CKE M EK+  L+EKM+EL+   + + YN+LM++   +G+P  +P LI EMK   ++ D 
Sbjct: 134  CKELMTEKSEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSLIQEMKASNVMLDS 193

Query: 497  HTYTCLLDSYALLKDTKNAERVLLEMKEAG-VKCDWTTYTSLASIYVKEGLIDKANSALK 673
            +TY   + + A + D    ERV  EMK  G V  DWTTY++LASI+V  GL DKA  ALK
Sbjct: 194  YTYNVWMRALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFVDAGLFDKAEVALK 253

Query: 674  EVENMDKFRDRKAYHILLTLYSAISNKLGVYQVWESLKLTFPETTNINYQFMLQALSRLG 853
            E+E  + F+D  AY  L+TLY    N   VY+VW SL+L FP+T NI+Y  M+Q L  L 
Sbjct: 254  ELEKRNAFKDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLK 313

Query: 854  DTDGLEKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREDAVKKGAEPNVGTLM 1033
            D  G EK F EWE     YDIR+ N+LI +Y++ DM+E+AE+L+E A ++GA+PN  TL 
Sbjct: 314  DLPGAEKCFREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERARRRGAKPNAKTLE 373

Query: 1034 KFMRFYLHKHQMKLACKYFEEATLKVKVN--HWKASQETVSLFL 1159
             FM +YL K   KLA  Y  EA    + N   W  S   +S+ +
Sbjct: 374  IFMDYYLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMM 417