BLASTX nr result

ID: Coptis24_contig00011484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011484
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20803.3| unnamed protein product [Vitis vinifera]              157   5e-36
ref|XP_002283217.1| PREDICTED: uncharacterized protein LOC100255...   157   5e-36
emb|CAA16530.1| hypothetical protein [Arabidopsis thaliana] gi|7...   121   3e-25
ref|NP_194855.2| sequence-specific DNA binding transcription fac...   120   6e-25
ref|XP_002527997.1| transcription factor, putative [Ricinus comm...   119   2e-24

>emb|CBI20803.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score =  157 bits (396), Expect = 5e-36
 Identities = 86/214 (40%), Positives = 136/214 (63%), Gaps = 16/214 (7%)
 Frame = +2

Query: 98  SKAAPNWTLGEMFVLVNEVATVESDSTKTIS---KWKHISDNCNALGVSRSLNQCRRKWE 268
           S+ AP+WT+ +  +LVNE+A VE +    +S   KWK I++NC AL VSR+ NQCRRKW+
Sbjct: 19  SQLAPDWTINDSLILVNEIAAVEGECLNALSTYQKWKIIAENCTALDVSRTFNQCRRKWD 78

Query: 269 LLFDQYSRIKDWEMQSRVVSYWSLDCDSQLELQLPLLFDKDLFGSIEEAVQAQE---ETD 439
            L  +Y++IK WE +SR VS+W+L+ + + EL LP+ F+++LF +I++ V +QE   +TD
Sbjct: 79  SLLFEYNKIKKWESRSRNVSFWTLESERRRELGLPVDFERELFKAIDDLVSSQEVRSDTD 138

Query: 440 TDSDPNF------TLTKSGLKKKRRWQIPRESKN-DEKDDEMAVKLREQARLVHAILRG- 595
             +DP         + + G KK++R ++P+++ + +EK+  M +KLRE A L+ AI++G 
Sbjct: 139 PGTDPEAEDDRLEVIAEYGPKKQKRREMPQKTTSLEEKEQMMVMKLRENADLIDAIVKGN 198

Query: 596 --DPECSSYSDMKGPGESQLEFKRWQGNELIKVL 691
             D         K     Q +FKR QG++LI  L
Sbjct: 199 LVDSVDFGLGGSKNRETLQADFKRRQGDKLIACL 232


>ref|XP_002283217.1| PREDICTED: uncharacterized protein LOC100255883 isoform 1 [Vitis
           vinifera] gi|359476329|ref|XP_003631820.1| PREDICTED:
           uncharacterized protein LOC100255883 isoform 2 [Vitis
           vinifera]
          Length = 274

 Score =  157 bits (396), Expect = 5e-36
 Identities = 86/214 (40%), Positives = 136/214 (63%), Gaps = 16/214 (7%)
 Frame = +2

Query: 98  SKAAPNWTLGEMFVLVNEVATVESDSTKTIS---KWKHISDNCNALGVSRSLNQCRRKWE 268
           S+ AP+WT+ +  +LVNE+A VE +    +S   KWK I++NC AL VSR+ NQCRRKW+
Sbjct: 43  SQLAPDWTINDSLILVNEIAAVEGECLNALSTYQKWKIIAENCTALDVSRTFNQCRRKWD 102

Query: 269 LLFDQYSRIKDWEMQSRVVSYWSLDCDSQLELQLPLLFDKDLFGSIEEAVQAQE---ETD 439
            L  +Y++IK WE +SR VS+W+L+ + + EL LP+ F+++LF +I++ V +QE   +TD
Sbjct: 103 SLLFEYNKIKKWESRSRNVSFWTLESERRRELGLPVDFERELFKAIDDLVSSQEVRSDTD 162

Query: 440 TDSDPNF------TLTKSGLKKKRRWQIPRESKN-DEKDDEMAVKLREQARLVHAILRG- 595
             +DP         + + G KK++R ++P+++ + +EK+  M +KLRE A L+ AI++G 
Sbjct: 163 PGTDPEAEDDRLEVIAEYGPKKQKRREMPQKTTSLEEKEQMMVMKLRENADLIDAIVKGN 222

Query: 596 --DPECSSYSDMKGPGESQLEFKRWQGNELIKVL 691
             D         K     Q +FKR QG++LI  L
Sbjct: 223 LVDSVDFGLGGSKNRETLQADFKRRQGDKLIACL 256


>emb|CAA16530.1| hypothetical protein [Arabidopsis thaliana]
           gi|7270029|emb|CAB79845.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 291

 Score =  121 bits (303), Expect = 3e-25
 Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 15/171 (8%)
 Frame = +2

Query: 98  SKAAPNWTLGEMFVLVNEVATVESDSTKTIS---KWKHISDNCNALGVSRSLNQCRRKWE 268
           S+ AP W + +  VLVNE+A VE+D +  +S   KW  I++NCNAL VSR+LNQCRRKW+
Sbjct: 13  SQVAPEWAVKDCLVLVNEIAAVEADCSNALSSFQKWTMITENCNALDVSRNLNQCRRKWD 72

Query: 269 LLFDQYSRIKDWEMQSRVV--SYWSLDCDSQLELQLPLLFDKDLFGSIEEAVQAQEE--- 433
            L   Y++IK WE Q R    SYWSL  D +  L LP   D +LF +I   V  Q+E   
Sbjct: 73  SLMSDYNQIKKWESQYRGTGRSYWSLSSDKRKLLNLPGDIDIELFEAINAVVMIQDEKAG 132

Query: 434 TDTDSDP------NFTLTKSGLKKKRRWQIPRESKNDE-KDDEMAVKLREQ 565
           T++DSDP      + +      + ++R  + +E+K +E +   + V  RE+
Sbjct: 133 TESDSDPEAQDVVDLSAELGSKRSRQRTMVMKETKKEEPRTSRVQVNTREK 183


>ref|NP_194855.2| sequence-specific DNA binding transcription factor [Arabidopsis
           thaliana] gi|26452367|dbj|BAC43269.1| unknown protein
           [Arabidopsis thaliana] gi|28950855|gb|AAO63351.1|
           At4g31270 [Arabidopsis thaliana]
           gi|332660484|gb|AEE85884.1| sequence-specific DNA
           binding transcription factor [Arabidopsis thaliana]
          Length = 294

 Score =  120 bits (301), Expect = 6e-25
 Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 18/174 (10%)
 Frame = +2

Query: 98  SKAAPNWTLGEMFVLVNEVATVESDSTKTIS---KWKHISDNCNALGVSRSLNQCRRKWE 268
           S+ AP W + +  VLVNE+A VE+D +  +S   KW  I++NCNAL VSR+LNQCRRKW+
Sbjct: 13  SQVAPEWAVKDCLVLVNEIAAVEADCSNALSSFQKWTMITENCNALDVSRNLNQCRRKWD 72

Query: 269 LLFDQYSRIKDWEMQSRVV--SYWSLDCDSQLELQLPLLFDKDLFGSIEEAVQAQEE--- 433
            L   Y++IK WE Q R    SYWSL  D +  L LP   D +LF +I   V  Q+E   
Sbjct: 73  SLMSDYNQIKKWESQYRGTGRSYWSLSSDKRKLLNLPGDIDIELFEAINAVVMIQDEKAG 132

Query: 434 TDTDSDP--------NFTLTKSGLKKKR-RWQIPRESKNDE-KDDEMAVKLREQ 565
           T++DSDP        +  L   G K+ R R  + +E+K +E +   + V  RE+
Sbjct: 133 TESDSDPEAQDVVDLSAELAFVGSKRSRQRTMVMKETKKEEPRTSRVQVNTREK 186


>ref|XP_002527997.1| transcription factor, putative [Ricinus communis]
           gi|223532623|gb|EEF34409.1| transcription factor,
           putative [Ricinus communis]
          Length = 419

 Score =  119 bits (297), Expect = 2e-24
 Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 13/175 (7%)
 Frame = +2

Query: 98  SKAAPNWTLGEMFVLVNEVATVESDSTKTIS---KWKHISDNCNALGVSRSLNQCRRKWE 268
           S+ AP+WT  E  +LVNE+A VE D  K +S   KW  I  NC+ L VSR+LNQCR KW 
Sbjct: 42  SQVAPDWTTKESLILVNEIAAVEGDCLKALSTHQKWNIIVQNCSVLDVSRTLNQCRSKWS 101

Query: 269 LLFDQYSRIKDWEMQ-SRVVSYWSLDCDSQLELQLPLLFDKDLFGSIEEAVQAQE---ET 436
            L   Y+RIK W+ + S   SYW LD  ++    LP  FD +LF +I+  V+AQ+   +T
Sbjct: 102 SLLADYNRIKQWDSKSSSESSYWLLDPPTRDRCGLPHNFDYELFRAIDHYVRAQKDHPDT 161

Query: 437 DTDSDPNF------TLTKSGLKKKRRWQIPRESKNDEKDDEMAVKLREQARLVHA 583
           D D+DP         + K G K+ RR  +  + + +E       K  EQA+++HA
Sbjct: 162 DPDTDPEADADLLDVIAKLGSKRHRRRSMSLKIQPEETSQNCCTK--EQAQILHA 214


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