BLASTX nr result

ID: Coptis24_contig00011481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011481
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276725.2| PREDICTED: structure-specific endonuclease s...    60   7e-07
emb|CBI15837.3| unnamed protein product [Vitis vinifera]               60   7e-07
ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203...    59   2e-06
ref|XP_002319418.1| predicted protein [Populus trichocarpa] gi|2...    58   3e-06

>ref|XP_002276725.2| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
           2-like [Vitis vinifera]
          Length = 364

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +1

Query: 88  VNFFSTKYMKNTVGCSSLPKQMKVQFYPMDELPCYTG 198
           VNFFSTKY K++ GC  LP+ M+VQ  PMDELPCY+G
Sbjct: 140 VNFFSTKYTKHSAGCPILPEHMRVQVSPMDELPCYSG 176


>emb|CBI15837.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +1

Query: 88  VNFFSTKYMKNTVGCSSLPKQMKVQFYPMDELPCYTG 198
           VNFFSTKY K++ GC  LP+ M+VQ  PMDELPCY+G
Sbjct: 140 VNFFSTKYTKHSAGCPILPEHMRVQVSPMDELPCYSG 176


>ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203492 [Cucumis sativus]
           gi|449471301|ref|XP_004153269.1| PREDICTED:
           uncharacterized protein LOC101204996 [Cucumis sativus]
           gi|449506301|ref|XP_004162709.1| PREDICTED:
           uncharacterized protein LOC101229010 [Cucumis sativus]
          Length = 395

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = +1

Query: 88  VNFFSTKYMKNTVGCSSLPKQMKVQFYPMDELPCYT 195
           VN+FSTK+MKN  GC SLP+ MKVQ  P++ELPCY+
Sbjct: 149 VNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYS 184


>ref|XP_002319418.1| predicted protein [Populus trichocarpa] gi|222857794|gb|EEE95341.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +1

Query: 88  VNFFSTKYMKNTVGCSSLPKQMKVQFYPMDELPCY 192
           +N+FST Y  ++VGC SLPK MKVQ  PMDELPCY
Sbjct: 128 INYFSTNYKVHSVGCPSLPKNMKVQICPMDELPCY 162


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