BLASTX nr result

ID: Coptis24_contig00011473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011473
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631825.1| PREDICTED: uncharacterized protein LOC100854...    65   2e-08
ref|NP_001077722.1| uncharacterized protein [Arabidopsis thalian...    64   4e-08
ref|XP_002891820.1| hypothetical protein ARALYDRAFT_474577 [Arab...    62   1e-07
ref|XP_004139345.1| PREDICTED: uncharacterized protein LOC101209...    57   6e-06
ref|XP_003530598.1| PREDICTED: uncharacterized protein LOC100807...    57   6e-06

>ref|XP_003631825.1| PREDICTED: uncharacterized protein LOC100854904 [Vitis vinifera]
           gi|296081875|emb|CBI20880.3| unnamed protein product
           [Vitis vinifera]
          Length = 98

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +1

Query: 238 VTMMPLHSAIALARLNSILSSESQSWGMIPQGISMPL 348
           V+MMPLHSAIA ARL S+LS ESQSWG+IPQGISMPL
Sbjct: 62  VSMMPLHSAIASARLTSVLSVESQSWGLIPQGISMPL 98


>ref|NP_001077722.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332195081|gb|AEE33202.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 97

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
 Frame = +1

Query: 142 IHSKNAPN---SSSPLKSTISANXXXXXXXXXXXXVTMMPLHSAIALARLNSILSSESQS 312
           +H  + P+   SSSP  +T   N            ++M+PLHSAIA ARL S LS ES+S
Sbjct: 26  VHISSLPSPIKSSSPSSATSRINQSFRLPVELSCCLSMLPLHSAIASARLISSLSVESKS 85

Query: 313 WGMIPQGISMPL 348
           WG++PQGISMPL
Sbjct: 86  WGLVPQGISMPL 97


>ref|XP_002891820.1| hypothetical protein ARALYDRAFT_474577 [Arabidopsis lyrata subsp.
           lyrata] gi|297337662|gb|EFH68079.1| hypothetical protein
           ARALYDRAFT_474577 [Arabidopsis lyrata subsp. lyrata]
          Length = 97

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
 Frame = +1

Query: 142 IHSKNAPN---SSSPLKSTISANXXXXXXXXXXXXVTMMPLHSAIALARLNSILSSESQS 312
           +H+ + P+   SSSP  +T   N            ++M+PLHSAIA ARL S LS ES+S
Sbjct: 26  VHASSLPSPIKSSSPSSATTRINQSFRLPVELSSCLSMLPLHSAIASARLISSLSVESKS 85

Query: 313 WGMIPQGISMPL 348
           W ++PQGISMPL
Sbjct: 86  WTLVPQGISMPL 97


>ref|XP_004139345.1| PREDICTED: uncharacterized protein LOC101209110 [Cucumis sativus]
          Length = 99

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +1

Query: 241 TMMPLHSAIALARLNSILSSESQSWGMIPQGISMPL 348
           ++MPLHSAIA ARL S L+ ESQ WG++PQGISMPL
Sbjct: 64  SLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 99


>ref|XP_003530598.1| PREDICTED: uncharacterized protein LOC100807973 [Glycine max]
          Length = 93

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
 Frame = +1

Query: 145 HSK-NAPNSSSPLKSTISA---NXXXXXXXXXXXXVTMMPLHSAIALARLNSILSSESQS 312
           H+K   P+  SPL  ++SA   +             +MMPLHSA+A ARL S LS ES  
Sbjct: 22  HNKFTKPSPLSPLSLSLSARRLSRTSRLPVELGSLESMMPLHSAVASARLVSSLSIESLG 81

Query: 313 WGMIPQGISMPL 348
           WG++PQGISMPL
Sbjct: 82  WGLVPQGISMPL 93


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