BLASTX nr result

ID: Coptis24_contig00011464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011464
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509922.1| conserved hypothetical protein [Ricinus comm...   114   1e-23
ref|XP_002304545.1| predicted protein [Populus trichocarpa] gi|2...   111   9e-23
gb|ABK96351.1| unknown [Populus trichocarpa x Populus deltoides]      109   3e-22
gb|AEW43293.1| hypothetical protein [Hevea brasiliensis]              101   7e-20
ref|XP_003563786.1| PREDICTED: uncharacterized protein LOC100828...   100   2e-19

>ref|XP_002509922.1| conserved hypothetical protein [Ricinus communis]
           gi|223549821|gb|EEF51309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 94

 Score =  114 bits (285), Expect = 1e-23
 Identities = 49/91 (53%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
 Frame = -1

Query: 461 MTEAGCRKSSYNLNGLLTSG---THSSRGRCEYFEMPLHYPRYKKEDYETMPEWQLDCLL 291
           M+   C  +++ ++GL  +G     + R +C  F+MPLHYPR+KK DYETMPEW+LDCLL
Sbjct: 1   MSGITCSNTAHAVSGLRPNGHQKQENKRDKCSCFQMPLHYPRFKKGDYETMPEWRLDCLL 60

Query: 290 NQYGLPVIGDVAHKRNFAMGAFLWPSQINKK 198
            +YGLP++GDV  KR FAMGAFLWPS++  +
Sbjct: 61  KEYGLPIVGDVNQKRKFAMGAFLWPSELENE 91


>ref|XP_002304545.1| predicted protein [Populus trichocarpa] gi|222841977|gb|EEE79524.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score =  111 bits (277), Expect = 9e-23
 Identities = 47/62 (75%), Positives = 51/62 (82%)
 Frame = -1

Query: 395 SSRGRCEYFEMPLHYPRYKKEDYETMPEWQLDCLLNQYGLPVIGDVAHKRNFAMGAFLWP 216
           S RG C  F+MPLHYPRYKK DYETMPEW+LDCLL +YGLP IGD   KR FAMGAFLWP
Sbjct: 29  SKRGTCSCFQMPLHYPRYKKSDYETMPEWRLDCLLKEYGLPAIGDANQKRKFAMGAFLWP 88

Query: 215 SQ 210
           S+
Sbjct: 89  SE 90


>gb|ABK96351.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 92

 Score =  109 bits (273), Expect = 3e-22
 Identities = 47/62 (75%), Positives = 51/62 (82%)
 Frame = -1

Query: 395 SSRGRCEYFEMPLHYPRYKKEDYETMPEWQLDCLLNQYGLPVIGDVAHKRNFAMGAFLWP 216
           S RG C  F+MPLHYPRYKK DYETMPEW+LDCLL +YGLP IGD   KR FAMGAFLWP
Sbjct: 29  SKRGTCSCFQMPLHYPRYKKCDYETMPEWRLDCLLKEYGLPAIGDANQKRKFAMGAFLWP 88

Query: 215 SQ 210
           S+
Sbjct: 89  SE 90


>gb|AEW43293.1| hypothetical protein [Hevea brasiliensis]
          Length = 79

 Score =  101 bits (252), Expect = 7e-20
 Identities = 40/60 (66%), Positives = 51/60 (85%)
 Frame = -1

Query: 392 SRGRCEYFEMPLHYPRYKKEDYETMPEWQLDCLLNQYGLPVIGDVAHKRNFAMGAFLWPS 213
           ++ RC YF+MPLHYPRY   +Y+TMPEW+LDCLL +YGLP+ G+V +KR FAMGAFLWP+
Sbjct: 20  AKDRCGYFQMPLHYPRYTHAEYDTMPEWKLDCLLKEYGLPITGNVEYKRKFAMGAFLWPN 79


>ref|XP_003563786.1| PREDICTED: uncharacterized protein LOC100828471 [Brachypodium
           distachyon]
          Length = 93

 Score =  100 bits (248), Expect = 2e-19
 Identities = 42/54 (77%), Positives = 47/54 (87%)
 Frame = -1

Query: 371 FEMPLHYPRYKKEDYETMPEWQLDCLLNQYGLPVIGDVAHKRNFAMGAFLWPSQ 210
           F+MPLHYPRYKK DYE MPEW++DCLL +YGLPV GDV  KR FAMGAFLWP+Q
Sbjct: 39  FQMPLHYPRYKKADYEAMPEWRVDCLLREYGLPVSGDVHDKRKFAMGAFLWPAQ 92


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