BLASTX nr result
ID: Coptis24_contig00011456
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011456 (510 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containi... 138 4e-31 emb|CBI35164.3| unnamed protein product [Vitis vinifera] 138 4e-31 emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera] 138 4e-31 ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containi... 131 7e-29 ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|2... 125 4e-27 >ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like [Vitis vinifera] Length = 731 Score = 138 bits (348), Expect = 4e-31 Identities = 72/128 (56%), Positives = 87/128 (67%), Gaps = 21/128 (16%) Frame = -1 Query: 510 EVNGSLHKFIMGGRSHPRTKETSEML---------------------NFDNEEKEIAPTH 394 EVNG++H+F+MG +SHP+ + +EML N D EEKE A T+ Sbjct: 603 EVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTY 662 Query: 393 HSERLTIASGLISTAPSIPIRIVKNLRVCDDCHSARKLLSKIFGRVIIVRDHNRSHHFCE 214 HSE+L +A GLISTAPS PIRIVKNLRVC+DCH+A KLLSKI+GRVIIVRD NR HHF E Sbjct: 663 HSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFRE 722 Query: 213 GVIIVRDH 190 G D+ Sbjct: 723 GYCSCGDY 730 >emb|CBI35164.3| unnamed protein product [Vitis vinifera] Length = 663 Score = 138 bits (348), Expect = 4e-31 Identities = 72/128 (56%), Positives = 87/128 (67%), Gaps = 21/128 (16%) Frame = -1 Query: 510 EVNGSLHKFIMGGRSHPRTKETSEML---------------------NFDNEEKEIAPTH 394 EVNG++H+F+MG +SHP+ + +EML N D EEKE A T+ Sbjct: 517 EVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTY 576 Query: 393 HSERLTIASGLISTAPSIPIRIVKNLRVCDDCHSARKLLSKIFGRVIIVRDHNRSHHFCE 214 HSE+L +A GLISTAPS PIRIVKNLRVC+DCH+A KLLSKI+GRVIIVRD NR HHF E Sbjct: 577 HSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFRE 636 Query: 213 GVIIVRDH 190 G D+ Sbjct: 637 GYCSCGDY 644 >emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera] Length = 771 Score = 138 bits (348), Expect = 4e-31 Identities = 72/128 (56%), Positives = 87/128 (67%), Gaps = 21/128 (16%) Frame = -1 Query: 510 EVNGSLHKFIMGGRSHPRTKETSEML---------------------NFDNEEKEIAPTH 394 EVNG++H+F+MG +SHP+ + +EML N D EEKE A T+ Sbjct: 643 EVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTY 702 Query: 393 HSERLTIASGLISTAPSIPIRIVKNLRVCDDCHSARKLLSKIFGRVIIVRDHNRSHHFCE 214 HSE+L +A GLISTAPS PIRIVKNLRVC+DCH+A KLLSKI+GRVIIVRD NR HHF E Sbjct: 703 HSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFRE 762 Query: 213 GVIIVRDH 190 G D+ Sbjct: 763 GYCSCGDY 770 >ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like [Glycine max] Length = 801 Score = 131 bits (329), Expect = 7e-29 Identities = 69/121 (57%), Positives = 79/121 (65%), Gaps = 21/121 (17%) Frame = -1 Query: 510 EVNGSLHKFIMGGRSHPRTKETSEML---------------------NFDNEEKEIAPTH 394 EVNG LH+FIMG R HP K+ EM+ N D E+K A + Sbjct: 673 EVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNY 732 Query: 393 HSERLTIASGLISTAPSIPIRIVKNLRVCDDCHSARKLLSKIFGRVIIVRDHNRSHHFCE 214 HSE+L +A GLISTAP +PIRIVKNLRVCDDCH+A KLLSKI+GR IIVRD NR HHF E Sbjct: 733 HSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKE 792 Query: 213 G 211 G Sbjct: 793 G 793 >ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa] Length = 705 Score = 125 bits (314), Expect = 4e-27 Identities = 66/121 (54%), Positives = 77/121 (63%), Gaps = 21/121 (17%) Frame = -1 Query: 510 EVNGSLHKFIMGGRSHPRTKETSEML---------------------NFDNEEKEIAPTH 394 EVNG +H F MG +HP ++ SEML N D EEKE A + Sbjct: 577 EVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNY 636 Query: 393 HSERLTIASGLISTAPSIPIRIVKNLRVCDDCHSARKLLSKIFGRVIIVRDHNRSHHFCE 214 HSE+L +A GLISTAP PIR+VKNLR+CDDCH+ KLLSKI+ RVIIVRD NR HHF E Sbjct: 637 HSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFRE 696 Query: 213 G 211 G Sbjct: 697 G 697