BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011456
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
emb|CBI35164.3| unnamed protein product [Vitis vinifera]              138   4e-31
emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]   138   4e-31
ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containi...   131   7e-29
ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27

>ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  138 bits (348), Expect = 4e-31
 Identities = 72/128 (56%), Positives = 87/128 (67%), Gaps = 21/128 (16%)
 Frame = -1

Query: 510 EVNGSLHKFIMGGRSHPRTKETSEML---------------------NFDNEEKEIAPTH 394
           EVNG++H+F+MG +SHP+ +  +EML                     N D EEKE A T+
Sbjct: 603 EVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTY 662

Query: 393 HSERLTIASGLISTAPSIPIRIVKNLRVCDDCHSARKLLSKIFGRVIIVRDHNRSHHFCE 214
           HSE+L +A GLISTAPS PIRIVKNLRVC+DCH+A KLLSKI+GRVIIVRD NR HHF E
Sbjct: 663 HSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFRE 722

Query: 213 GVIIVRDH 190
           G     D+
Sbjct: 723 GYCSCGDY 730


>emb|CBI35164.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  138 bits (348), Expect = 4e-31
 Identities = 72/128 (56%), Positives = 87/128 (67%), Gaps = 21/128 (16%)
 Frame = -1

Query: 510 EVNGSLHKFIMGGRSHPRTKETSEML---------------------NFDNEEKEIAPTH 394
           EVNG++H+F+MG +SHP+ +  +EML                     N D EEKE A T+
Sbjct: 517 EVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTY 576

Query: 393 HSERLTIASGLISTAPSIPIRIVKNLRVCDDCHSARKLLSKIFGRVIIVRDHNRSHHFCE 214
           HSE+L +A GLISTAPS PIRIVKNLRVC+DCH+A KLLSKI+GRVIIVRD NR HHF E
Sbjct: 577 HSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFRE 636

Query: 213 GVIIVRDH 190
           G     D+
Sbjct: 637 GYCSCGDY 644


>emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  138 bits (348), Expect = 4e-31
 Identities = 72/128 (56%), Positives = 87/128 (67%), Gaps = 21/128 (16%)
 Frame = -1

Query: 510  EVNGSLHKFIMGGRSHPRTKETSEML---------------------NFDNEEKEIAPTH 394
            EVNG++H+F+MG +SHP+ +  +EML                     N D EEKE A T+
Sbjct: 643  EVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTY 702

Query: 393  HSERLTIASGLISTAPSIPIRIVKNLRVCDDCHSARKLLSKIFGRVIIVRDHNRSHHFCE 214
            HSE+L +A GLISTAPS PIRIVKNLRVC+DCH+A KLLSKI+GRVIIVRD NR HHF E
Sbjct: 703  HSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFRE 762

Query: 213  GVIIVRDH 190
            G     D+
Sbjct: 763  GYCSCGDY 770


>ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Glycine max]
          Length = 801

 Score =  131 bits (329), Expect = 7e-29
 Identities = 69/121 (57%), Positives = 79/121 (65%), Gaps = 21/121 (17%)
 Frame = -1

Query: 510  EVNGSLHKFIMGGRSHPRTKETSEML---------------------NFDNEEKEIAPTH 394
            EVNG LH+FIMG R HP  K+  EM+                     N D E+K  A  +
Sbjct: 673  EVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNY 732

Query: 393  HSERLTIASGLISTAPSIPIRIVKNLRVCDDCHSARKLLSKIFGRVIIVRDHNRSHHFCE 214
            HSE+L +A GLISTAP +PIRIVKNLRVCDDCH+A KLLSKI+GR IIVRD NR HHF E
Sbjct: 733  HSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKE 792

Query: 213  G 211
            G
Sbjct: 793  G 793


>ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|222858026|gb|EEE95573.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  125 bits (314), Expect = 4e-27
 Identities = 66/121 (54%), Positives = 77/121 (63%), Gaps = 21/121 (17%)
 Frame = -1

Query: 510 EVNGSLHKFIMGGRSHPRTKETSEML---------------------NFDNEEKEIAPTH 394
           EVNG +H F MG  +HP  ++ SEML                     N D EEKE A  +
Sbjct: 577 EVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNY 636

Query: 393 HSERLTIASGLISTAPSIPIRIVKNLRVCDDCHSARKLLSKIFGRVIIVRDHNRSHHFCE 214
           HSE+L +A GLISTAP  PIR+VKNLR+CDDCH+  KLLSKI+ RVIIVRD NR HHF E
Sbjct: 637 HSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFRE 696

Query: 213 G 211
           G
Sbjct: 697 G 697