BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011455
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
emb|CBI35164.3| unnamed protein product [Vitis vinifera]              117   1e-24
emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]   117   1e-24
ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21

>ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/102 (59%), Positives = 73/102 (71%), Gaps = 21/102 (20%)
 Frame = +3

Query: 3   HEFIMGGRSHPCTKETSEML---------------------NVDDKEKEIALTYHSERLA 119
           HEF+MG +SHP  +  +EML                     N+D++EKE ALTYHSE+LA
Sbjct: 609 HEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLA 668

Query: 120 IASGLISTAPSTPIRIVKNLRVCDDCHSARKLLSKIFGRVII 245
           +A GLISTAPSTPIRIVKNLRVC+DCH+A KLLSKI+GRVII
Sbjct: 669 MAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVII 710


>emb|CBI35164.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/102 (59%), Positives = 73/102 (71%), Gaps = 21/102 (20%)
 Frame = +3

Query: 3   HEFIMGGRSHPCTKETSEML---------------------NVDDKEKEIALTYHSERLA 119
           HEF+MG +SHP  +  +EML                     N+D++EKE ALTYHSE+LA
Sbjct: 523 HEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLA 582

Query: 120 IASGLISTAPSTPIRIVKNLRVCDDCHSARKLLSKIFGRVII 245
           +A GLISTAPSTPIRIVKNLRVC+DCH+A KLLSKI+GRVII
Sbjct: 583 MAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVII 624


>emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/102 (59%), Positives = 73/102 (71%), Gaps = 21/102 (20%)
 Frame = +3

Query: 3   HEFIMGGRSHPCTKETSEML---------------------NVDDKEKEIALTYHSERLA 119
           HEF+MG +SHP  +  +EML                     N+D++EKE ALTYHSE+LA
Sbjct: 649 HEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLA 708

Query: 120 IASGLISTAPSTPIRIVKNLRVCDDCHSARKLLSKIFGRVII 245
           +A GLISTAPSTPIRIVKNLRVC+DCH+A KLLSKI+GRVII
Sbjct: 709 MAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVII 750


>ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|222858026|gb|EEE95573.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/102 (53%), Positives = 68/102 (66%), Gaps = 21/102 (20%)
 Frame = +3

Query: 3   HEFIMGGRSHPCTKETSEML---------------------NVDDKEKEIALTYHSERLA 119
           H+F MG  +HP  ++ SEML                     N+D++EKE AL YHSE+LA
Sbjct: 583 HDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLA 642

Query: 120 IASGLISTAPSTPIRIVKNLRVCDDCHSARKLLSKIFGRVII 245
           +A GLISTAP TPIR+VKNLR+CDDCH+  KLLSKI+ RVII
Sbjct: 643 MAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVII 684


>ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  107 bits (266), Expect = 1e-21
 Identities = 57/102 (55%), Positives = 66/102 (64%), Gaps = 21/102 (20%)
 Frame = +3

Query: 3   HEFIMGGRSHPCTKETSEML---------------------NVDDKEKEIALTYHSERLA 119
           HEFIMG R HP  K+  EM+                     N+D ++K  AL YHSE+LA
Sbjct: 679 HEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLA 738

Query: 120 IASGLISTAPSTPIRIVKNLRVCDDCHSARKLLSKIFGRVII 245
           +A GLISTAP  PIRIVKNLRVCDDCH+A KLLSKI+GR II
Sbjct: 739 MAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREII 780